Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24510 Davidia involucrata HOM05D003268 ORTHO05D003719 1.3e-145 520.0 317 100.0
Dinv30944 Davidia involucrata HOM05D003268 ORTHO05D003719 5.5e-64 248.8 206 71.4
Lj5P319T26 Lonicera japonica HOM05D003268 ORTHO05D003719 4.8e-36 156.0 194 52.6
CSS0047817 Camellia sinensis var. sinensis HOM05D003268 ORTHO05D003719 2.7e-34 150.2 174 54.0
Cc02_g35810 Coffea canephora HOM05D003268 ORTHO05D003719 1.1e-32 144.8 202 53.5
Actinidia17741 Actinidia chinensis HOM05D003268 ORTHO05D003719 1.9e-32 144.1 236 47.0
Actinidia11688 Actinidia chinensis HOM05D003268 ORTHO05D003719 2.5e-32 143.7 192 51.6
Hma1.2p1_0759F.1_g213940 Hydrangea macrophylla HOM05D003268 ORTHO05D003719 3.4e-29 133.3 205 48.8
PGSC0003DMG400044126 Solanum tuberosum HOM05D003268 ORTHO05D003719 4.1e-27 126.3 213 45.1
Solyc01g101160.2 Solanum lycopersicum HOM05D003268 ORTHO05D003719 2.7e-26 123.6 213 43.2
Sopen01g044640 Solanum pennellii HOM05D003268 ORTHO05D003719 2.7e-26 123.6 213 43.2
Rhsim11G0103200 Rhododendron simsii HOM05D003268 ORTHO05D003719 2.3e-25 120.6 208 45.2
Nitab4.5_0005904g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 1.0e-22 111.7 209 42.6
CAN.G1248.20 Capsicum annuum HOM05D003268 ORTHO05D003719 1.4e-22 111.3 251 37.8
Nitab4.5_0002485g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 1.2e-21 108.2 209 41.6
vmacro01600 Vaccinium macrocarpon HOM05D003268 ORTHO05D003719 3.4e-21 106.7 250 37.6
Oeu023377.1 Olea europaea HOM05D003268 ORTHO05D003719 7.5e-21 105.5 125 56.8
Oeu023379.1 Olea europaea HOM05D003268 ORTHO05D003719 7.5e-21 105.5 125 56.8
SalBow4G1159 Salvia bowleyana HOM05D003268 ORTHO05D003719 2.2e-20 104.0 209 40.2
MSTRG.16427 Avicennia marina HOM05D003268 ORTHO05D003719 4.9e-20 102.8 195 39.5
Oeu016542.1 Olea europaea HOM05D003268 ORTHO05D003719 6.3e-20 102.4 269 34.2
SGA_v2.0_scaffold22G09705 Striga asiatica HOM05D003268 ORTHO05D003719 2.3e-17 94.0 184 40.2
Peaxi162Scf00357g00013 Petunia axillaris HOM05D003268 ORTHO05D003719 2.5e-16 90.5 165 44.2
Migut.N00971 Erythranthe guttata HOM05D003268 ORTHO05D003719 6.1e-15 85.9 162 39.5
vmacro22837 Vaccinium macrocarpon HOM05D003268 ORTHO05D003719 1.8e-14 84.3 159 41.5
ECA240G0886 Erigeron canadensis HOM05D003268 ORTHO05D003719 6.8e-14 82.4 117 50.4
TAR633G0292 Trochodendron aralioides HOM05D003268 ORTHO05D003719 9.8e-13 78.6 219 37.0
QL06p014213 Quercus lobata HOM05D003268 ORTHO05D003719 1.3e-12 78.2 134 43.3
unitig_578.g15944 Utricularia gibba HOM05D003268 ORTHO05D003719 1.7e-12 77.8 68 69.1
TAR636G0250 Trochodendron aralioides HOM05D003268 ORTHO05D003719 3.7e-12 76.6 238 34.5
unitig_8.g4507 Utricularia gibba HOM05D003268 ORTHO05D003719 6.4e-12 75.9 167 41.3
HanXRQChr09g0250221 Helianthus annuus HOM05D003268 ORTHO05D003719 8.3e-12 75.5 103 52.4
PGR031G0843 Punica granatum HOM05D003268 ORTHO05D003719 1.1e-11 75.1 83 65.1
Thecc.04G313000 Theobroma cacao HOM05D003268 ORTHO05D003719 1.8e-11 74.3 190 35.8
Cpa.g.sc53.77 Carica papaya HOM05D003268 ORTHO05D003719 2.4e-11 73.9 97 50.5
Manes.11G020800 Manihot esculenta HOM05D003268 ORTHO05D003719 3.2e-11 73.6 123 46.3
Potri.010G002200 Populus trichocarpa HOM05D003268 ORTHO05D003719 4.1e-11 73.2 124 42.7
Sabra10G0001700 Salix brachista HOM05D003268 ORTHO05D003719 4.1e-11 73.2 100 51.0
COL.COLO4_34517 Corchorus olitorius HOM05D003268 ORTHO05D003719 9.2e-11 72.0 153 38.6
Glyma.17G041900 Glycine max HOM05D003268 ORTHO05D003719 3.5e-10 70.1 117 43.6
Duzib212G0032 Durio zibethinus HOM05D003268 ORTHO05D003719 4.6e-10 69.7 132 43.9
Glyma.13G118100 Glycine max HOM05D003268 ORTHO05D003719 4.6e-10 69.7 154 38.3
MELO3C015242.2 Cucumis melo HOM05D003268 ORTHO05D003719 5.9e-10 69.3 65 61.5
ClCG03G017870 Citrullus lanatus HOM05D003268 ORTHO05D003719 1.7e-09 67.8 65 60.0
TAR362G1252 Trochodendron aralioides HOM05D003268 ORTHO05D003719 1.7e-09 67.8 204 34.3
Haze_00767 Corylus avellana HOM05D003268 ORTHO05D003719 2.3e-09 67.4 102 47.1
DCAR_001893 Daucus carota HOM05D003268 ORTHO05D003719 2.3e-09 67.4 191 34.0
HanXRQChr09g0248281 Helianthus annuus HOM05D003268 ORTHO05D003719 2.3e-09 67.4 150 39.3
Manes.08G107700 Manihot esculenta HOM05D003268 ORTHO05D003719 3.9e-09 66.6 162 41.4
Ciclev10005819m.g Citrus clementina HOM05D003268 ORTHO05D003719 5.0e-09 66.2 99 48.5
CsaV3_1G038030 Cucumis sativus L. HOM05D003268 ORTHO05D003719 1.9e-08 64.3 132 40.2
Phvul.003G123200 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 1.9e-08 64.3 89 52.8
Lalb_Chr13g0299031 Lupinus albus HOM05D003268 ORTHO05D003719 4.3e-08 63.2 113 46.0
MBI19_g47476_MAGBIO Magnolia biondii HOM05D003268 ORTHO05D003719 4.3e-08 63.2 235 31.9
CANSAT54G2527 Cannabis sativa HOM05D003268 ORTHO05D003719 5.6e-08 62.8 105 47.6
Gohir.A02G058400 Gossypium hirsutum HOM05D003268 ORTHO05D003719 5.6e-08 62.8 129 41.9
VMungo1215G0793 Vigna mungo HOM05D003268 ORTHO05D003719 5.6e-08 62.8 89 52.8
Gohir.D02G064200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 7.3e-08 62.4 120 42.5
Gorai.005G072500 Gossypium raimondii HOM05D003268 ORTHO05D003719 7.3e-08 62.4 120 42.5
Sed0007403 Sechium edule HOM05D003268 ORTHO05D003719 7.3e-08 62.4 103 41.7
FvH4_6g08440 Fragaria vesca HOM05D003268 ORTHO05D003719 9.5e-08 62.0 132 39.4
FAN14G0797 Fragaria x ananassa HOM05D003268 ORTHO05D003719 9.5e-08 62.0 132 39.4
Aa31LG1G5560 Aethionema arabicum HOM05D003268 ORTHO05D003719 1.2e-07 61.6 60 65.0
TWI56G0501 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 1.6e-07 61.2 145 41.4
Aqoxy2G02513 Aquilegia oxysepala HOM05D003268 ORTHO05D003719 2.1e-07 60.8 103 43.7
THA.LOC104816841 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 2.8e-07 60.5 134 40.3
THA.LOC104820490 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 3.6e-07 60.1 187 36.4
CiPaw.07G035600 Carya illinoinensis HOM05D003268 ORTHO05D003719 4.7e-07 59.7 128 39.1
AT1G09520 Arabidopsis thaliana HOM05D003268 ORTHO05D003719 8.0e-07 58.9 90 46.7
Migut.B00880 Erythranthe guttata HOM05D003268 ORTHO05D003719 8.0e-07 58.9 133 41.4
MD16G1136300 Malus domestica HOM05D003268 ORTHO05D003719 8.0e-07 58.9 61 59.0
TAR365G0427 Trochodendron aralioides HOM05D030320 ORTHO05D028677 8.0e-07 58.9 151 37.1
Carub.0001s0886 Capsella rubella HOM05D003268 ORTHO05D003719 1.1e-06 58.5 132 37.1
MD13G1139400 Malus domestica HOM05D003268 ORTHO05D003719 1.1e-06 58.5 61 60.7
RcHm_v2.0_Chr3g0458411 Rosa chinensis HOM05D003268 ORTHO05D003719 1.1e-06 58.5 122 44.3
Dinv29508 Davidia involucrata HOM05D003268 ORTHO05D003719 1.4e-06 58.2 86 48.8
Lsat_1_v5_gn_7_63941 Lactuca sativa HOM05D003268 ORTHO05D003719 1.4e-06 58.2 119 37.0
Oeu020279.1 Olea europaea HOM05D003268 ORTHO05D003719 1.8e-06 57.8 87 46.0
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 1.8e-06 57.8 154 35.7
Cpa.g.sc48.222 Carica papaya HOM05D003268 ORTHO05D003719 3.1e-06 57.0 128 35.9
COL.COLO4_05489 Corchorus olitorius HOM05D003268 ORTHO05D003719 4.0e-06 56.6 65 53.8
Aa31LG8G4410 Aethionema arabicum HOM05D002272 ORTHO05D005405 5.2e-06 56.2 89 41.6
Migut.O00762 Erythranthe guttata HOM05D003268 ORTHO05D003719 5.2e-06 56.2 83 42.2
Haze_03993 Corylus avellana HOM05D003268 ORTHO05D003719 6.8e-06 55.8 149 35.6
PSO210G7784 Papaver somniferum HOM05D003268 ORTHO05D003719 6.8e-06 55.8 65 55.4
PSO761G0464 Papaver somniferum HOM05D003268 ORTHO05D003719 6.8e-06 55.8 65 55.4
HPP92_012769 Vanilla planifolia HOM05D003268 ORTHO05D003719 6.8e-06 55.8 130 36.2


User provided reference genes

Program Settings