Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24461 Davidia involucrata HOM05D005172 ORTHO05D006324 2.0e-219 765.4 364 100.0
Dinv30897 Davidia involucrata HOM05D005172 ORTHO05D006324 3.9e-199 698.0 364 89.8
TAR362G0256 Trochodendron aralioides HOM05D005172 ORTHO05D006324 2.1e-184 649.0 359 83.0
Hma1.2p1_0008F-1.1_g005570 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 3.7e-181 638.3 362 81.8
GSVIVG01031247001 Vitis vinifera HOM05D005172 ORTHO05D006324 3.4e-179 631.7 364 78.6
Lju926A5G28 Lonicera japonica HOM05D005172 ORTHO05D006324 7.7e-179 630.6 365 80.8
Nn4g25569 Nelumbo nucifera HOM05D005172 ORTHO05D006324 3.2e-177 625.2 358 81.0
CSS0017820 Camellia sinensis var. sinensis HOM05D005172 ORTHO05D006324 3.6e-176 621.7 363 80.2
TWI36G0897 Tripterygium wilfordii HOM05D005172 ORTHO05D006324 1.0e-175 620.2 362 78.5
Duzib133G1494 Durio zibethinus HOM05D005172 ORTHO05D006324 7.7e-171 604.0 362 74.6
FAN24G1196 Fragaria x ananassa HOM05D005172 ORTHO05D006324 7.7e-171 604.0 364 76.6
FAN24G2042 Fragaria x ananassa HOM05D005172 ORTHO05D006324 7.7e-171 604.0 364 76.6
RcHm_v2.0_Chr6g0249301 Rosa chinensis HOM05D005172 ORTHO05D006324 1.1e-169 600.1 359 76.6
Thecc.01G315700 Theobroma cacao HOM05D005172 ORTHO05D006324 1.5e-169 599.7 362 74.9
FAN19G1206 Fragaria x ananassa HOM05D005172 ORTHO05D006324 2.5e-169 599.0 362 76.2
Gohir.A07G129100 Gossypium hirsutum HOM05D005172 ORTHO05D006324 2.5e-169 599.0 359 74.7
Cfa005774 Carpinus fangiana HOM05D005172 ORTHO05D006324 9.4e-169 597.0 361 75.6
Gohir.D07G133500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 1.2e-168 596.7 359 74.4
Gorai.001G144800 Gossypium raimondii HOM05D005172 ORTHO05D006324 3.6e-168 595.1 359 74.1
Prupe.8G000200 Prunus persica HOM05D005172 ORTHO05D006324 3.6e-168 595.1 361 76.2
Peaxi162Scf01061g00133 Petunia axillaris HOM05D005172 ORTHO05D006324 4.0e-167 591.7 356 73.0
Manes.05G014300 Manihot esculenta HOM05D005172 ORTHO05D006324 2.6e-166 589.0 358 74.3
Atru.chr5.994 Acer truncatum HOM05D005172 ORTHO05D006324 3.3e-166 588.6 362 73.2
Cc02_g35150 Coffea canephora HOM05D005172 ORTHO05D006324 4.4e-166 588.2 360 75.3
MD07G1000100 Malus domestica HOM05D005172 ORTHO05D006324 9.7e-166 587.0 364 74.5
Duzib211G0527 Durio zibethinus HOM05D005172 ORTHO05D006324 2.8e-165 585.5 362 72.4
Sabra14G0088100 Salix brachista HOM05D005172 ORTHO05D006324 4.8e-165 584.7 361 72.6
Eucgr.K03551 Eucalyptus grandis HOM05D005172 ORTHO05D006324 1.1e-164 583.6 356 73.3
Nitab4.5_0011508g0010 Nicotiana tabacum HOM05D005172 ORTHO05D006324 1.1e-164 583.6 362 72.1
Nitab4.5_0001338g0130 Nicotiana tabacum HOM05D005172 ORTHO05D006324 1.4e-164 583.2 359 72.4
Potri.014G118600 Populus trichocarpa HOM05D005172 ORTHO05D006324 1.4e-164 583.2 363 72.5
MBI18_g32028_MAGBIO Magnolia biondii HOM05D005172 ORTHO05D006324 2.4e-164 582.4 364 73.6
CiPaw.07G118900 Carya illinoinensis HOM05D005172 ORTHO05D006324 4.1e-164 581.6 359 73.0
Haze_05066 Corylus avellana HOM05D005172 ORTHO05D006324 1.2e-163 580.1 351 75.2
Aqoxy2G02725 Aquilegia oxysepala HOM05D005172 ORTHO05D006324 1.3e-162 576.6 364 71.4
DCAR_001909 Daucus carota HOM05D005172 ORTHO05D006324 2.9e-162 575.5 365 73.4
Manes.01G229300 Manihot esculenta HOM05D005172 ORTHO05D006324 1.1e-161 573.5 358 72.6
TAR633G1620 Trochodendron aralioides HOM05D005172 ORTHO05D006324 2.5e-161 572.4 312 83.0
CAN.G1076.20 Capsicum annuum HOM05D005172 ORTHO05D006324 4.2e-161 571.6 359 71.0
Lj5g0001265 Lotus japonicus HOM05D005172 ORTHO05D006324 4.2e-161 571.6 368 71.2
QL12p019456 Quercus lobata HOM05D005172 ORTHO05D006324 5.5e-161 571.2 348 72.4
PGR044G0670 Punica granatum HOM05D005172 ORTHO05D006324 1.6e-160 569.7 363 73.3
Carub.0005s2909 Capsella rubella HOM05D005172 ORTHO05D006324 2.1e-160 569.3 361 69.5
Lalb_Chr21g0309651 Lupinus albus HOM05D005172 ORTHO05D006324 6.1e-160 567.8 367 70.3
CANSAT25G1511 Cannabis sativa HOM05D005172 ORTHO05D006324 8.0e-160 567.4 363 71.6
Solyc01g100590.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 8.0e-160 567.4 355 70.4
Glyma.02G011100 Glycine max HOM05D005172 ORTHO05D006324 1.4e-159 566.6 365 71.8
Ca_10273_v3 Cicer arietinum L. HOM05D005172 ORTHO05D006324 2.3e-159 565.8 348 73.3
AL5G45130 Arabidopsis lyrata HOM05D005172 ORTHO05D006324 3.0e-159 565.5 361 70.4
PSO761G0644 Papaver somniferum HOM05D005172 ORTHO05D006324 3.0e-159 565.5 358 70.1
Phvul.007G213050 Phaseolus vulgaris HOM05D005172 ORTHO05D006324 3.0e-159 565.5 366 71.0
AT3G62370 Arabidopsis thaliana HOM05D005172 ORTHO05D006324 6.8e-159 564.3 361 70.4
Sopen01g044090 Solanum pennellii HOM05D005172 ORTHO05D006324 8.8e-159 563.9 355 70.1
VMungo0720G2990 Vigna mungo HOM05D005172 ORTHO05D006324 8.8e-159 563.9 366 70.8
PGSC0003DMG400002764 Solanum tuberosum HOM05D005172 ORTHO05D006324 4.4e-158 561.6 355 70.1
A07p25960 Brassica napus HOM05D005172 ORTHO05D006324 9.8e-158 560.5 361 69.3
Thhalv10006054m.g Eutrema salsugineum HOM05D005172 ORTHO05D006324 1.7e-157 559.7 361 69.0
BolC6t37994H Brassica oleracea HOM05D005172 ORTHO05D006324 2.2e-157 559.3 360 70.3
Sp5g01030 Schrenkiella parvula HOM05D005172 ORTHO05D006324 2.2e-157 559.3 361 69.5
Glyma.10G011700 Glycine max HOM05D005172 ORTHO05D006324 2.8e-157 558.9 360 70.8
BraA07t30243Z Brassica rapa HOM05D005172 ORTHO05D006324 3.7e-157 558.5 359 69.6
Medtr1g086810 Medicago truncatula HOM05D005172 ORTHO05D006324 3.7e-157 558.5 367 70.3
CARHR172700 Cardamine hirsuta HOM05D005172 ORTHO05D006324 4.8e-157 558.1 362 70.4
BcaC08g45198 Brassica carinata HOM05D005172 ORTHO05D006324 1.1e-156 557.0 359 69.6
C06p28240 Brassica napus HOM05D005172 ORTHO05D006324 1.1e-156 557.0 359 69.6
arahy.Tifrunner.gnm1.ann1.SY690W Arachis hypogaea HOM05D005172 ORTHO05D006324 1.4e-156 556.6 366 71.0
BcaB02g07340 Brassica carinata HOM05D005172 ORTHO05D006324 1.4e-156 556.6 359 69.4
Ah.01g003950 Amaranthus hybridus HOM05D005172 ORTHO05D006324 2.4e-156 555.8 364 70.3
vmacro01567 Vaccinium macrocarpon HOM05D005172 ORTHO05D006324 2.4e-156 555.8 456 61.0
Psat6g162640 Pisum sativum HOM05D005172 ORTHO05D006324 2.7e-155 552.4 365 68.2
Rhsim11G0096600 Rhododendron simsii HOM05D005172 ORTHO05D006324 1.7e-154 549.7 447 60.4
Manes.05G011070 Manihot esculenta HOM05D005172 ORTHO05D006324 2.3e-154 549.3 318 77.0
SGA_v2.0_scaffold334G49079 Striga asiatica HOM05D005172 ORTHO05D006324 2.9e-154 548.9 363 69.1
FvH4_2g00030 Fragaria vesca HOM05D005172 ORTHO05D006324 3.8e-154 548.5 319 79.3
Manes.05G005607 Manihot esculenta HOM05D005172 ORTHO05D006324 3.8e-154 548.5 318 77.0
Aa31LG10G16300 Aethionema arabicum HOM05D005172 ORTHO05D006324 8.6e-154 547.4 360 67.8
Manes.05G014725 Manihot esculenta HOM05D005172 ORTHO05D006324 8.6e-154 547.4 319 76.2
Manes.08G002402 Manihot esculenta HOM05D005172 ORTHO05D006324 2.5e-153 545.8 318 76.7
Sc17g0000390 Simmondsia chinensis HOM05D005172 ORTHO05D006324 1.2e-152 543.5 362 69.3
MSTRG.21697 Avicennia marina HOM05D005172 ORTHO05D006324 2.1e-152 542.7 363 66.7
Eucgr.H01000 Eucalyptus grandis HOM05D005172 ORTHO05D006324 2.8e-152 542.3 349 69.6
EL10As5g23554 Beta vulgaris HOM05D005172 ORTHO05D006324 6.1e-152 541.2 358 70.1
Oeu018081.1 Olea europaea HOM05D005172 ORTHO05D006324 6.1e-152 541.2 363 68.3
CsaV3_7G030060 Cucumis sativus L. HOM05D005172 ORTHO05D006324 2.3e-151 539.3 354 69.8
MSTRG.20376 Avicennia marina HOM05D005172 ORTHO05D006324 3.4e-150 535.4 360 69.2
PGSC0003DMG400009049 Solanum tuberosum HOM05D005172 ORTHO05D006324 1.7e-149 533.1 357 67.8
Sopen01g031090 Solanum pennellii HOM05D005172 ORTHO05D006324 4.9e-149 531.6 357 67.5
Solyc01g079310.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 6.3e-149 531.2 357 68.1
CAN.G293.20 Capsicum annuum HOM05D005172 ORTHO05D006324 2.4e-148 529.3 357 67.2
Hund09645 Selenicereus undatus HOM05D005172 ORTHO05D006324 4.1e-148 528.5 347 69.7
Migut.B00958 Erythranthe guttata HOM05D005172 ORTHO05D006324 4.5e-147 525.0 359 66.3
AUR62031944 Chenopodium quinoa HOM05D005172 ORTHO05D006324 7.8e-147 524.2 357 67.8
ATR0693G418 Amborella trichopoda HOM05D005172 ORTHO05D006324 1.3e-146 523.5 359 67.4
Ah.02g112400 Amaranthus hybridus HOM05D005172 ORTHO05D006324 3.8e-146 521.9 409 61.9
AUR62022232 Chenopodium quinoa HOM05D005172 ORTHO05D006324 6.6e-146 521.2 344 68.6
DCAR_018281 Daucus carota HOM05D005172 ORTHO05D006324 6.6e-146 521.2 364 65.7
Sed0009537 Sechium edule HOM05D005172 ORTHO05D006324 8.6e-146 520.8 352 67.3
CDE08G0763 Ceratophyllum demersum HOM05D005172 ORTHO05D006324 6.8e-143 511.1 354 65.3
SalBow3G3203 Salvia bowleyana HOM05D005172 ORTHO05D006324 5.8e-142 508.1 361 62.6
Gohir.D12G127500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 6.4e-141 504.6 363 66.4
Gorai.008G138400 Gossypium raimondii HOM05D005172 ORTHO05D006324 8.3e-141 504.2 363 65.8
HPP92_002597 Vanilla planifolia HOM05D005172 ORTHO05D006324 1.6e-139 500.0 366 63.9
Cpa.g.sc18.70 Carica papaya HOM05D005172 ORTHO05D006324 2.5e-137 492.7 362 64.4
Os03g0309000 Oryza sativa ssp. japonica HOM05D005172 ORTHO05D006324 2.1e-136 489.6 335 67.5
MELO3C015915.2 Cucumis melo HOM05D005172 ORTHO05D006324 1.2e-134 483.8 367 63.2
ClCG09G005000 Citrullus lanatus HOM05D005172 ORTHO05D006324 2.0e-134 483.0 354 64.4
Actinidia16862 Actinidia chinensis HOM05D005172 ORTHO05D006324 5.8e-134 481.5 314 72.3
Zm00001eb014830 Zea mays HOM05D005172 ORTHO05D006324 7.5e-134 481.1 363 61.4
Manes.05G006214 Manihot esculenta HOM05D005172 ORTHO05D006324 6.0e-131 471.5 275 76.7
Manes.05G008035 Manihot esculenta HOM05D005172 ORTHO05D006324 1.3e-130 470.3 275 76.4
Manes.05G012891 Manihot esculenta HOM05D005172 ORTHO05D006324 1.1e-129 467.2 275 76.0
SalBow7G2322 Salvia bowleyana HOM05D006337 ORTHO05D008050 1.5e-129 466.8 365 62.7
THA.LOC104827661 Tarenaya hassleriana HOM05D005172 ORTHO05D006324 6.8e-127 458.0 270 76.3
arahy.Tifrunner.gnm1.ann1.2XA8QH Arachis hypogaea HOM05D005172 ORTHO05D006324 2.1e-123 446.4 268 75.7
Hma1.2p1_3280F.1_g334820 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 1.1e-116 424.1 316 67.1
SEGI_40738 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 2.5e-113 412.9 338 59.2
HPP92_012811 Vanilla planifolia HOM05D005172 ORTHO05D006324 1.2e-110 404.1 287 65.2
FAN20G2313 Fragaria x ananassa HOM05D005172 ORTHO05D006324 9.3e-108 394.4 232 76.7
unitig_0.g2227 Utricularia gibba HOM05D005172 ORTHO05D003916 1.0e-106 391.0 332 54.8
FAN20G2797 Fragaria x ananassa HOM05D005172 ORTHO05D006324 2.5e-105 386.3 254 70.9
Ciclev10020948m.g Citrus clementina HOM05D005172 ORTHO05D006324 9.3e-100 367.9 206 78.2
Nitab4.5_0003540g0100 Nicotiana tabacum HOM05D005172 ORTHO05D006324 2.7e-99 366.3 230 70.0
Mapoly0070s0043 Marchantia polymorpha HOM05D005172 ORTHO05D006324 6.9e-95 351.7 367 45.8
Lalb_Chr06g0166961 Lupinus albus HOM05D005172 ORTHO05D006324 1.3e-93 347.4 220 70.9
Oeu000005.1 Olea europaea HOM05D005172 ORTHO05D006324 1.6e-91 340.5 237 65.8
Nitab4.5_0006240g0010 Nicotiana tabacum HOM05D005172 ORTHO05D006324 5.7e-89 332.0 333 50.8
Pp3c9_8970 Physcomitrium patens HOM05D005172 ORTHO05D006324 2.1e-88 330.1 363 44.9
SMO119G0084 Selaginella moellendorffii HOM05D005172 ORTHO05D006324 2.8e-88 329.7 324 48.8
SEGI_37594 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 1.1e-87 327.8 261 59.8
Pp3c15_10420 Physcomitrium patens HOM05D005172 ORTHO05D006324 1.8e-87 327.0 363 45.2
COL.COLO4_23212 Corchorus olitorius HOM05D005172 ORTHO05D006324 4.6e-83 312.4 182 76.4
Ciclev10024074m.g Citrus clementina HOM05D005172 ORTHO05D006324 1.8e-82 310.5 203 69.0
TPR.G38637 Trifolium pratense HOM05D005172 ORTHO05D006324 5.1e-82 308.9 194 74.7
Gohir.A12G123800 Gossypium hirsutum HOM05D005172 ORTHO05D006324 2.6e-78 296.6 209 66.5
AagrBONN_evm.TU.Sc2ySwM_228.5181 Anthoceros agrestis HOM05D005172 ORTHO05D006324 7.7e-78 295.0 369 41.7
Ciclev10023330m.g Citrus clementina HOM05D005172 ORTHO05D006324 2.6e-65 253.4 155 76.1
Peaxi162Scf00691g00617 Petunia axillaris HOM05D005172 ORTHO05D006324 8.5e-61 238.4 244 49.6
Lalb_Chr06g0166951 Lupinus albus HOM05D005172 ORTHO05D006324 4.4e-57 226.1 160 66.2
Oeu008479.1 Olea europaea HOM05D005172 ORTHO05D006324 2.6e-49 200.3 144 63.9
CBR_g51501 Chara braunii HOM05D005172 ORTHO05D006324 1.7e-40 171.0 226 40.3
Ciclev10023884m.g Citrus clementina HOM05D005172 ORTHO05D006324 1.1e-39 168.3 110 72.7
TPR.G38640 Trifolium pratense HOM05D005172 ORTHO05D006324 8.0e-35 152.1 110 62.7
COL.COLO4_23213 Corchorus olitorius HOM05D005172 ORTHO05D006324 2.9e-32 143.7 99 64.6
CAN.G1071.4 Capsicum annuum HOM05D005172 ORTHO05D006324 4.3e-28 129.8 98 59.2
SMO163G0002 Selaginella moellendorffii HOM05D005172 ORTHO05D006324 3.5e-22 110.2 97 48.5
CBR_g51503 Chara braunii HOM05D005172 ORTHO05D006324 8.6e-13 79.0 121 32.2
GSVIVG01037608001 Vitis vinifera HOM05D005172 ORTHO05D439154 1.7e-08 64.7 102 38.2


User provided reference genes

Program Settings