Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24442 Davidia involucrata HOM05D006888 ORTHO05D008371 5.3e-130 468.8 312 100.0
Dinv24440 Davidia involucrata HOM05D001444 ORTHO05D003766 4.8e-38 163.3 95 89.5
Dinv30892 Davidia involucrata HOM05D001444 ORTHO05D003766 1.9e-31 141.4 95 78.9
Hma1.2p1_0008F-1.1_g005610 Hydrangea macrophylla HOM05D001444 ORTHO05D003766 1.3e-30 138.7 95 75.8
CSS0031861 Camellia sinensis var. sinensis HOM05D001444 ORTHO05D003766 1.2e-25 122.1 93 71.0
vmacro19754 Vaccinium macrocarpon HOM05D001444 ORTHO05D003766 4.5e-20 103.6 96 64.6
Actinidia35523 Actinidia chinensis HOM05D006888 ORTHO05D008371 2.9e-19 100.9 69 69.6
TAR636G1039 Trochodendron aralioides HOM05D001444 ORTHO05D003766 8.4e-19 99.4 98 58.2
GSVIVG01031236001 Vitis vinifera HOM05D001444 ORTHO05D003766 2.5e-18 97.8 96 55.2
Nitab4.5_0003894g0030 Nicotiana tabacum HOM05D001444 ORTHO05D003766 3.2e-18 97.4 95 62.1
CSS0014440 Camellia sinensis var. sinensis HOM05D006888 ORTHO05D008371 2.1e-17 94.7 89 58.4
TAR362G0873 Trochodendron aralioides HOM05D006888 ORTHO05D008371 2.7e-17 94.4 86 59.3
TAR633G2402 Trochodendron aralioides HOM05D001444 ORTHO05D003766 2.7e-17 94.4 98 54.1
Nitab4.5_0000155g0060 Nicotiana tabacum HOM05D001444 ORTHO05D035009 4.6e-17 93.6 95 60.0
Hma1.2p1_0472F.1_g160001 Hydrangea macrophylla HOM05D006888 ORTHO05D008371 7.9e-17 92.8 70 60.0
Sopen10g009280 Solanum pennellii HOM05D001444 ORTHO05D003766 1.8e-16 91.7 93 55.9
Rhsim05G0131900 Rhododendron simsii HOM05D001444 ORTHO05D003766 5.1e-16 90.1 96 57.3
Cc02_g35000 Coffea canephora HOM05D001444 ORTHO05D003766 8.7e-16 89.4 97 54.6
Psat7g173680 Pisum sativum HOM05D006888 ORTHO05D008371 1.5e-15 88.6 173 35.8
Solyc10g024320.2 Solanum lycopersicum HOM05D001444 ORTHO05D003766 1.9e-15 88.2 93 54.8
CSS0050387 Camellia sinensis var. sinensis HOM05D006888 ORTHO05D008371 2.5e-15 87.8 72 62.5
Lsat_1_v5_gn_7_74401 Lactuca sativa HOM05D006888 ORTHO05D008371 3.3e-15 87.4 75 60.0
Actinidia01682 Actinidia chinensis HOM05D001444 ORTHO05D003766 1.6e-14 85.1 95 58.9
CANSAT54G0476 Cannabis sativa HOM05D006888 ORTHO05D008371 1.6e-14 85.1 225 33.8
Duzib177G0618 Durio zibethinus HOM05D006888 ORTHO05D008371 2.8e-14 84.3 142 38.0
TAR365G0568 Trochodendron aralioides HOM05D001444 ORTHO05D003766 3.7e-14 84.0 96 54.2
Lj5A334T57 Lonicera japonica HOM05D006888 ORTHO05D008371 4.8e-14 83.6 69 55.1
Haze_04061 Corylus avellana HOM05D004265 ORTHO05D005175 1.4e-13 82.0 86 51.2
Cfa006701 Carpinus fangiana HOM05D006888 ORTHO05D008371 1.8e-13 81.6 86 51.2
GSVIVG01031237001 Vitis vinifera HOM05D006888 ORTHO05D008371 1.8e-13 81.6 69 55.1
Actinidia01509 Actinidia chinensis HOM05D001444 ORTHO05D003766 3.1e-13 80.9 95 57.9
Gorai.007G306300 Gossypium raimondii HOM05D006888 ORTHO05D008371 5.3e-13 80.1 70 57.1
Medtr4g108060 Medicago truncatula HOM05D006888 ORTHO05D008371 5.3e-13 80.1 70 57.1
Nn3g21688 Nelumbo nucifera HOM05D001444 ORTHO05D003766 5.3e-13 80.1 103 51.5
Prupe.7G165800 Prunus persica HOM05D006888 ORTHO05D008371 5.3e-13 80.1 70 57.1
Nn4g25600 Nelumbo nucifera HOM05D001444 ORTHO05D003766 6.9e-13 79.7 98 48.0
Medtr4g074390 Medicago truncatula HOM05D006888 ORTHO05D008371 9.0e-13 79.3 70 55.7
Thecc.05G322800 Theobroma cacao HOM05D006888 ORTHO05D008371 9.0e-13 79.3 73 53.4
CiPaw.08G155700 Carya illinoinensis HOM05D006888 ORTHO05D008371 1.5e-12 78.6 88 46.6
COL.COLO4_05553 Corchorus olitorius HOM05D004265 ORTHO05D005175 1.5e-12 78.6 125 38.4
Phvul.002G058500 Phaseolus vulgaris HOM05D006888 ORTHO05D008371 1.5e-12 78.6 70 52.9
MELO3C004189.2 Cucumis melo HOM05D001444 ORTHO05D003766 2.0e-12 78.2 93 50.5
Gohir.A11G273300 Gossypium hirsutum HOM05D006888 ORTHO05D008371 2.0e-12 78.2 70 57.1
Gohir.D11G283400 Gossypium hirsutum HOM05D006888 ORTHO05D008371 2.0e-12 78.2 70 55.7
HanXRQChr02g0059161 Helianthus annuus HOM05D006888 ORTHO05D008371 2.6e-12 77.8 72 56.9
Sc16g0009020 Simmondsia chinensis HOM05D006888 ORTHO05D008371 2.6e-12 77.8 69 53.6
Ca_03033_v3 Cicer arietinum L. HOM05D006888 ORTHO05D008371 3.4e-12 77.4 70 55.7
Sed0006327 Sechium edule HOM05D001444 ORTHO05D003766 3.4e-12 77.4 93 49.5
VMungo1215G1495 Vigna mungo HOM05D006888 ORTHO05D008371 3.4e-12 77.4 70 52.9
ClCG00G002460 Citrullus lanatus HOM05D001444 ORTHO05D003766 4.5e-12 77.0 93 51.6
ClCG02G014960 Citrullus lanatus HOM05D001444 ORTHO05D003766 4.5e-12 77.0 93 51.6
CsaV3_2G007040 Cucumis sativus L. HOM05D001444 ORTHO05D003766 4.5e-12 77.0 93 54.8
CDE05G0641 Ceratophyllum demersum HOM05D002225 ORTHO05D002271 5.9e-12 76.6 70 52.9
Lalb_Chr05g0225641 Lupinus albus HOM05D006888 ORTHO05D008371 5.9e-12 76.6 129 34.1
Nn1g08113 Nelumbo nucifera HOM05D006888 ORTHO05D008371 5.9e-12 76.6 92 46.7
EL10Ac4g09446 Beta vulgaris HOM05D001444 ORTHO05D003766 7.6e-12 76.3 100 53.0
MD02G1110600 Malus domestica HOM05D006888 ORTHO05D008371 7.6e-12 76.3 69 52.2
Oeu053708.1 Olea europaea HOM05D001444 ORTHO05D003766 1.0e-11 75.9 98 54.1
QL03p013638 Quercus lobata HOM05D006888 ORTHO05D008371 1.0e-11 75.9 88 52.3
Glyma.11G103200 Glycine max HOM05D006888 ORTHO05D008371 1.3e-11 75.5 70 52.9
Psat5g196040 Pisum sativum HOM05D006888 ORTHO05D008371 1.7e-11 75.1 70 54.3
QL03p039859 Quercus lobata HOM05D006888 ORTHO05D008371 2.9e-11 74.3 88 51.1
Psat5g195760 Pisum sativum HOM05D006888 ORTHO05D008371 5.0e-11 73.6 70 52.9
TPR.G21561 Trifolium pratense HOM05D006888 ORTHO05D008371 5.0e-11 73.6 70 52.9
Psat5g177360 Pisum sativum HOM05D006888 ORTHO05D008371 8.5e-11 72.8 70 51.4
Lalb_Chr01g0001501 Lupinus albus HOM05D006888 ORTHO05D008371 2.5e-10 71.2 72 48.6
arahy.Tifrunner.gnm1.ann1.8HC1KC Arachis hypogaea HOM05D006888 ORTHO05D008371 3.2e-10 70.9 72 47.2
RcHm_v2.0_Chr2g0099761 Rosa chinensis HOM05D006888 ORTHO05D008371 5.5e-10 70.1 70 48.6
ATR0796G182 Amborella trichopoda HOM05D001444 ORTHO05D003766 7.2e-10 69.7 95 49.5
arahy.Tifrunner.gnm1.ann1.8QK61L Arachis hypogaea HOM05D006888 ORTHO05D008371 7.2e-10 69.7 69 47.8
ClCG02G014950 Citrullus lanatus HOM05D006888 ORTHO05D008371 7.2e-10 69.7 70 52.9
EL10Ac4g09447 Beta vulgaris HOM05D006888 ORTHO05D008371 9.3e-10 69.3 83 47.0
Psat5g190440 Pisum sativum HOM05D006888 ORTHO05D008371 9.3e-10 69.3 125 41.6
MELO3C004188.2 Cucumis melo HOM05D006888 ORTHO05D008371 1.2e-09 68.9 70 51.4
Potri.005G014500 Populus trichocarpa HOM05D006888 ORTHO05D008371 1.2e-09 68.9 240 29.6
Peaxi162Scf00673g00033 Petunia axillaris HOM05D006888 ORTHO05D008371 2.1e-09 68.2 70 51.4
MD12G1206100 Malus domestica HOM05D001444 ORTHO05D003766 3.6e-09 67.4 96 47.9
Glyma.10G147200 Glycine max HOM05D001444 ORTHO05D003766 6.1e-09 66.6 92 45.7
ATR0618G019 Amborella trichopoda HOM05D006888 ORTHO05D008371 7.9e-09 66.2 82 42.7
CsaV3_2G007050 Cucumis sativus L. HOM05D006888 ORTHO05D008371 7.9e-09 66.2 70 51.4
TWI56G0663 Tripterygium wilfordii HOM05D006888 ORTHO05D008371 1.0e-08 65.9 69 47.8
Lj3g0005449 Lotus japonicus HOM05D006888 ORTHO05D008371 1.3e-08 65.5 70 48.6
Manes.03G083400 Manihot esculenta HOM05D006888 ORTHO05D008371 1.3e-08 65.5 87 42.5
Nitab4.5_0000368g0090 Nicotiana tabacum HOM05D006888 ORTHO05D008371 1.3e-08 65.5 70 51.4
Prupe.6G313300 Prunus persica HOM05D001444 ORTHO05D003766 1.3e-08 65.5 96 51.0
Oeu064824.1 Olea europaea HOM05D006888 ORTHO05D008371 1.8e-08 65.1 92 42.4
PGSC0003DMG400002802 Solanum tuberosum HOM05D006888 ORTHO05D008371 2.3e-08 64.7 70 47.1
CARHR009830 Cardamine hirsuta HOM05D006888 ORTHO05D008371 3.9e-08 63.9 93 44.1
CAN.G2431.1 Capsicum annuum HOM05D001444 ORTHO05D003766 6.7e-08 63.2 93 49.5
Sopen01g043970 Solanum pennellii HOM05D006888 ORTHO05D008371 6.7e-08 63.2 70 47.1
C05p07930 Brassica napus HOM05D006888 ORTHO05D008371 8.7e-08 62.8 70 45.7
Carub.0001s0920 Capsella rubella HOM05D006888 ORTHO05D008371 8.7e-08 62.8 70 45.7
CiPaw.07G029500 Carya illinoinensis HOM05D001444 ORTHO05D003766 8.7e-08 62.8 95 43.2
BolC5t29545H Brassica oleracea HOM05D006888 ORTHO05D008371 1.1e-07 62.4 70 45.7
Ah.03g134540 Amaranthus hybridus HOM05D001444 ORTHO05D003766 1.5e-07 62.0 96 43.8
CANSAT54G1984 Cannabis sativa HOM05D001444 ORTHO05D003766 1.5e-07 62.0 93 50.5
PSO063G2884 Papaver somniferum HOM05D001444 ORTHO05D003766 1.5e-07 62.0 103 38.8
Solyc01g100450.1 Solanum lycopersicum HOM05D006888 ORTHO05D008371 1.5e-07 62.0 70 45.7
Aa31LG1G5110 Aethionema arabicum HOM05D006888 ORTHO05D008371 1.9e-07 61.6 92 40.2
Thhalv10009487m.g Eutrema salsugineum HOM05D006888 ORTHO05D008371 1.9e-07 61.6 70 45.7
PSO782G1742 Papaver somniferum HOM05D001444 ORTHO05D003766 1.9e-07 61.6 103 38.8
AT1G09820 Arabidopsis thaliana HOM05D006888 ORTHO05D008371 2.5e-07 61.2 70 44.3
Glyma.20G097700 Glycine max HOM05D001444 ORTHO05D003766 2.5e-07 61.2 92 42.4
DCAR_005420 Daucus carota HOM05D001444 ORTHO05D035009 3.3e-07 60.8 94 38.3
Oeu064819.1 Olea europaea HOM05D001444 ORTHO05D003766 3.3e-07 60.8 97 45.4
Migut.N01380 Erythranthe guttata HOM05D001444 ORTHO05D003766 4.3e-07 60.5 94 43.6
FvH4_6g07420 Fragaria vesca HOM05D001444 ORTHO05D003766 4.3e-07 60.5 93 44.1
Sp1g08450 Schrenkiella parvula HOM05D006888 ORTHO05D008371 4.3e-07 60.5 92 42.4
CDE05G1119 Ceratophyllum demersum HOM05D001444 ORTHO05D003766 5.7e-07 60.1 95 41.1
CAN.G1715.1 Capsicum annuum HOM05D006888 ORTHO05D008371 7.4e-07 59.7 69 49.3
FAN09G2106 Fragaria x ananassa HOM05D001444 ORTHO05D003766 7.4e-07 59.7 97 45.4
Migut.K00794 Erythranthe guttata HOM05D006888 ORTHO05D008371 9.7e-07 59.3 116 37.1
Aqoxy7G03321 Aquilegia oxysepala HOM05D001444 ORTHO05D003766 1.3e-06 58.9 97 42.3
SGA_v2.0_scaffold5G02782 Striga asiatica HOM05D006888 ORTHO05D008371 1.3e-06 58.9 120 34.2
TWI56G1076 Tripterygium wilfordii HOM05D001444 ORTHO05D003766 1.3e-06 58.9 98 42.9
AL1G20420 Arabidopsis lyrata HOM05D006888 ORTHO05D008371 1.6e-06 58.5 70 42.9
BcaC05g24842 Brassica carinata HOM05D006888 ORTHO05D008371 1.6e-06 58.5 69 43.5
FAN05G3889 Fragaria x ananassa HOM05D001444 ORTHO05D003766 1.6e-06 58.5 97 45.4
RcHm_v2.0_Chr3g0457021 Rosa chinensis HOM05D001444 ORTHO05D003766 1.6e-06 58.5 77 53.2
FvH4_1g12100 Fragaria vesca HOM05D006888 ORTHO05D008371 2.2e-06 58.2 70 42.9
FAN02G3316 Fragaria x ananassa HOM05D001444 ORTHO05D003766 2.2e-06 58.2 76 47.4
CDE11G0937 Ceratophyllum demersum HOM05D001444 ORTHO05D003766 2.8e-06 57.8 95 40.0
FAN19G1999 Fragaria x ananassa HOM05D006888 ORTHO05D008371 2.8e-06 57.8 70 42.9
Phvul.007G201200 Phaseolus vulgaris HOM05D001444 ORTHO05D003766 2.8e-06 57.8 92 43.5
FAN23G2816 Fragaria x ananassa HOM05D006888 ORTHO05D008371 3.7e-06 57.4 70 42.9
FAN26G0552 Fragaria x ananassa HOM05D006888 ORTHO05D008371 3.7e-06 57.4 70 42.9
Sc06g0005760 Simmondsia chinensis HOM05D001444 ORTHO05D003766 3.7e-06 57.4 96 45.8
PGR083G0370 Punica granatum HOM05D001444 ORTHO05D003766 4.8e-06 57.0 96 47.9
Cfa006700 Carpinus fangiana HOM05D001444 ORTHO05D003766 6.3e-06 56.6 95 46.3
FAN14G2853 Fragaria x ananassa HOM05D001444 ORTHO05D003766 6.3e-06 56.6 93 41.9
MD04G1193200 Malus domestica HOM05D001444 ORTHO05D003766 6.3e-06 56.6 73 52.1
PGR083G0380 Punica granatum HOM05D006888 ORTHO05D008371 6.3e-06 56.6 194 31.4
Aqoxy3G04232 Aquilegia oxysepala HOM05D006888 ORTHO05D008371 8.2e-06 56.2 78 44.9
DCAR_017356 Daucus carota HOM05D001444 ORTHO05D003766 8.2e-06 56.2 94 36.2
FAN19G0192 Fragaria x ananassa HOM05D006888 ORTHO05D008371 8.2e-06 56.2 70 41.4
FAN28G0085 Fragaria x ananassa HOM05D006888 ORTHO05D008371 8.2e-06 56.2 70 41.4


User provided reference genes

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