Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 3.0e-137 491.9 254 100.0
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 1.5e-104 383.3 258 81.4
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 3.2e-99 365.5 254 73.2
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 4.8e-95 351.7 254 72.0
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 1.2e-85 320.5 254 68.1
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 2.5e-83 312.8 262 64.5
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 1.2e-82 310.5 299 61.5
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 3.0e-81 305.8 373 50.1
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 5.2e-81 305.1 257 65.8
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 6.7e-81 304.7 256 62.9
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 1.5e-80 303.5 256 65.6
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 3.7e-79 298.9 256 62.1
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 6.3e-79 298.1 256 62.1
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 1.2e-77 293.9 255 64.3
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 4.5e-77 292.0 257 60.3
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 2.9e-76 289.3 257 60.7
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 2.5e-75 286.2 258 62.8
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 4.7e-74 282.0 262 60.3
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 6.1e-74 281.6 252 60.3
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.0e-73 280.8 259 60.2
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 1.8e-73 280.0 252 59.9
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 5.7e-72 275.0 252 59.1
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 7.5e-72 274.6 252 58.7
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 9.8e-72 274.2 252 59.5
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 1.3e-71 273.9 259 58.7
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 3.7e-71 272.3 250 59.2
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 6.3e-71 271.6 256 59.0
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 5.4e-70 268.5 253 60.1
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 1.2e-69 267.3 258 61.2
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 7.7e-69 264.6 258 56.6
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 7.7e-69 264.6 249 57.8
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 3.8e-68 262.3 271 55.0
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 5.0e-68 261.9 253 58.9
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 8.5e-68 261.2 260 55.8
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 1.1e-67 260.8 258 55.0
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 1.5e-67 260.4 253 57.7
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 1.5e-67 260.4 253 59.3
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 2.5e-67 259.6 251 57.0
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 9.4e-67 257.7 248 58.1
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 1.6e-66 256.9 251 55.4
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 2.1e-66 256.5 250 56.4
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 5.2e-65 251.9 251 56.6
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 8.8e-65 251.1 254 55.9
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 1.2e-64 250.8 251 54.2
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 1.2e-64 250.8 271 52.8
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 1.3e-63 247.3 250 54.8
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 9.2e-62 241.1 254 55.1
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 1.6e-61 240.4 271 53.5
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 2.0e-61 240.0 236 58.5
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 2.9e-60 236.1 250 55.6
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 3.3e-59 232.6 255 50.6
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 1.6e-58 230.3 265 52.5
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 6.1e-58 228.4 271 51.3
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 1.4e-57 227.3 256 55.1
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 5.2e-57 225.3 271 50.6
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 5.2e-57 225.3 271 50.6
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 5.7e-56 221.9 155 69.7
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 2.9e-55 219.5 154 72.7
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 3.7e-55 219.2 215 58.6
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 7.0e-54 214.9 189 56.6
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 7.0e-54 214.9 252 51.2
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 3.5e-53 212.6 261 47.1
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 1.0e-52 211.1 208 56.2
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 1.7e-52 210.3 312 44.6
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 1.5e-51 207.2 261 49.8
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 1.6e-50 203.8 250 45.6
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 3.6e-50 202.6 171 60.8
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 4.7e-50 202.2 170 60.6
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 6.2e-50 201.8 237 47.3
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 2.9e-47 193.0 252 48.0
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 4.9e-47 192.2 248 46.8
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 4.9e-47 192.2 187 57.2
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 2.4e-46 189.9 248 46.8
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 2.4e-46 189.9 232 49.1
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 3.2e-46 189.5 248 47.2
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 4.1e-46 189.1 248 45.6
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 1.6e-45 187.2 248 46.0
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 6.0e-45 185.3 164 60.4
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 1.3e-44 184.1 248 46.8
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 3.0e-44 183.0 249 46.6
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 8.6e-44 181.4 248 43.5
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 1.9e-43 180.3 248 43.1
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 1.9e-43 180.3 248 43.1
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 4.3e-43 179.1 196 48.5
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 4.7e-42 175.6 248 46.8
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 1.1e-41 174.5 271 38.7
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 9.8e-40 167.9 104 76.0
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 1.7e-36 157.1 218 46.8
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 1.5e-35 154.1 251 38.6
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 2.5e-35 153.3 263 39.5
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 5.6e-35 152.1 166 56.0
Nitab4.5_0008206g0020 Nicotiana tabacum HOM05D007225 ORTHO05D009062 2.8e-34 149.8 161 55.9
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 6.2e-34 148.7 269 36.4
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 1.1e-33 147.9 268 32.1
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 3.1e-33 146.4 239 40.6
Nitab4.5_0010123g0010 Nicotiana tabacum HOM05D007225 ORTHO05D009062 5.2e-33 145.6 162 55.6
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 2.0e-32 143.7 191 39.3
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 3.2e-30 136.3 252 38.5
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 4.1e-30 136.0 114 59.6
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 3.9e-28 129.4 277 33.6
AagrBONN_evm.TU.Sc2ySwM_117.1984 Anthoceros agrestis HOM05D007225 ORTHO05D009062 8.6e-28 128.3 224 36.2
SMO146G0397 Selaginella moellendorffii HOM05D007225 ORTHO05D009062 2.8e-26 123.2 266 33.8
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 1.2e-24 117.9 98 56.1
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 2.1e-21 107.1 99 54.5
GSVIVG01022344001 Vitis vinifera HOM05D007225 ORTHO05D009062 2.4e-17 93.6 103 61.2
SEGI_25786 Sequoiadendron giganteum HOM05D021798 ORTHO05D009062 7.1e-14 82.0 154 32.5
Peaxi162Scf00172g00068 Petunia axillaris HOM05D007225 ORTHO05D009062 1.6e-13 80.9 79 58.2
Os04g0693200 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 2.1e-10 70.5 97 37.1
arahy.Tifrunner.gnm1.ann1.LBHD5T Arachis hypogaea HOM05D007225 ORTHO05D009062 3.1e-09 66.6 136 35.3
Zm00001eb434540 Zea mays HOM05D007225 ORTHO05D009062 1.2e-08 64.7 111 36.9
SMO143G0295 Selaginella moellendorffii HOM05D021798 ORTHO05D018028 3.4e-08 63.2 182 26.4
SMO197G0114 Selaginella moellendorffii HOM05D021798 ORTHO05D018028 1.4e-06 57.8 128 29.7
CBR_g23098 Chara braunii HOM05D007225 ORTHO05D009062 7.1e-06 55.5 280 22.1


User provided reference genes

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