Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24372 Davidia involucrata HOM05D007927 ORTHO05D010029 1.5e-119 433.0 226 100.0
Dinv07117 Davidia involucrata HOM05D007927 ORTHO05D010029 2.4e-98 362.5 231 84.8
Hma1.2p1_0476F.1_g160770 Hydrangea macrophylla HOM05D007927 ORTHO05D010029 8.9e-93 344.0 228 79.8
Lj4A837T13 Lonicera japonica HOM05D007927 ORTHO05D010029 2.9e-83 312.4 241 71.8
CSS0028810 Camellia sinensis var. sinensis HOM05D007927 ORTHO05D010029 3.8e-83 312.0 241 73.0
vmacro18670 Vaccinium macrocarpon HOM05D007927 ORTHO05D010029 6.4e-83 311.2 231 72.3
Rhsim08G0002700 Rhododendron simsii HOM05D007927 ORTHO05D010029 1.4e-82 310.1 230 73.0
TAR628G1503 Trochodendron aralioides HOM05D007927 ORTHO05D010029 1.7e-75 286.6 233 71.7
ClCG02G000450 Citrullus lanatus HOM05D007927 ORTHO05D010029 2.2e-75 286.2 240 66.7
CsaV3_2G019410 Cucumis sativus L. HOM05D007927 ORTHO05D010029 6.4e-75 284.6 237 67.1
Atru.chr4.915 Acer truncatum HOM05D007927 ORTHO05D010029 8.4e-75 284.3 234 67.9
Duzib264G0901 Durio zibethinus HOM05D007927 ORTHO05D010029 1.4e-74 283.5 248 65.3
COL.COLO4_35756 Corchorus olitorius HOM05D007927 ORTHO05D010029 3.2e-74 282.3 242 66.5
Actinidia01389 Actinidia chinensis HOM05D007927 ORTHO05D010029 1.2e-73 280.4 231 70.1
PGR102G3035 Punica granatum HOM05D007927 ORTHO05D010029 1.2e-73 280.4 234 67.5
Lsat_1_v5_gn_5_69000 Lactuca sativa HOM05D007927 ORTHO05D010029 3.5e-73 278.9 236 69.9
CiPaw.04G081700 Carya illinoinensis HOM05D007927 ORTHO05D010029 7.9e-73 277.7 241 65.6
QL10p043457 Quercus lobata HOM05D007927 ORTHO05D010029 3.0e-72 275.8 249 63.9
Thecc.01G133600 Theobroma cacao HOM05D007927 ORTHO05D010029 6.6e-72 274.6 245 66.1
Eucgr.J01289 Eucalyptus grandis HOM05D007927 ORTHO05D010029 8.7e-72 274.2 235 67.2
Ciclev10002360m.g Citrus clementina HOM05D007927 ORTHO05D010029 1.9e-71 273.1 236 64.8
Aqoxy5G02324 Aquilegia oxysepala HOM05D007927 ORTHO05D010029 2.5e-71 272.7 232 65.5
DCAR_014334 Daucus carota HOM05D007927 ORTHO05D010029 3.6e-70 268.9 244 63.9
Nn1g06275 Nelumbo nucifera HOM05D007927 ORTHO05D010029 4.8e-70 268.5 235 64.7
MBI03_g37385_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 1.1e-69 267.3 233 65.2
MBI03_g42544_MAGBIO Magnolia biondii HOM05D007927 ORTHO05D010029 1.1e-69 267.3 233 65.2
ECA233G3055 Erigeron canadensis HOM05D007927 ORTHO05D010029 4.0e-69 265.4 233 63.9
Gohir.A09G004300 Gossypium hirsutum HOM05D007927 ORTHO05D010029 4.0e-69 265.4 239 66.9
TWI75G1488 Tripterygium wilfordii HOM05D007927 ORTHO05D010029 5.3e-69 265.0 230 64.3
Gohir.D09G003800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 6.9e-69 264.6 242 65.3
Psat7g045960 Pisum sativum HOM05D007927 ORTHO05D010029 9.0e-69 264.2 236 63.6
FAN28G0845 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.0e-68 263.1 235 62.6
HanXRQChr12g0380561 Helianthus annuus HOM05D007927 ORTHO05D010029 2.0e-68 263.1 231 65.4
Prupe.4G271700 Prunus persica HOM05D007927 ORTHO05D010029 2.0e-68 263.1 249 61.4
Manes.13G085601 Manihot esculenta HOM05D007927 ORTHO05D010029 3.4e-68 262.3 229 65.1
Cfa002902 Carpinus fangiana HOM05D007927 ORTHO05D001116 5.8e-68 261.5 161 81.4
Haze_25255 Corylus avellana HOM05D007927 ORTHO05D010029 5.8e-68 261.5 252 61.5
RcHm_v2.0_Chr2g0121541 Rosa chinensis HOM05D007927 ORTHO05D010029 5.8e-68 261.5 234 61.1
Potri.005G063600 Populus trichocarpa HOM05D007927 ORTHO05D010029 9.9e-68 260.8 232 64.2
FAN19G2953 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.3e-67 260.4 237 61.6
FvH4_1g24440 Fragaria vesca HOM05D007927 ORTHO05D010029 1.7e-67 260.0 236 61.4
Glyma.05G191900 Glycine max HOM05D007927 ORTHO05D010029 2.9e-67 259.2 244 59.4
GSVIVG01026475001 Vitis vinifera HOM05D007927 ORTHO05D010029 2.9e-67 259.2 230 66.1
Medtr8g093750 Medicago truncatula HOM05D007927 ORTHO05D010029 3.8e-67 258.8 236 60.6
MD01G1005400 Malus domestica HOM05D007927 ORTHO05D010029 4.9e-67 258.5 246 60.2
Cpa.g.sc42.162 Carica papaya HOM05D007927 ORTHO05D010029 8.4e-67 257.7 231 61.5
VMungo0251G0724 Vigna mungo HOM05D007927 ORTHO05D010029 1.9e-66 256.5 244 60.7
TPR.G37352 Trifolium pratense HOM05D007927 ORTHO05D010029 3.2e-66 255.8 239 61.1
Lj4g0020524 Lotus japonicus HOM05D007927 ORTHO05D010029 9.3e-66 254.2 227 64.3
FAN23G1573 Fragaria x ananassa HOM05D007927 ORTHO05D010029 2.1e-65 253.1 224 61.6
ATR0584G243 Amborella trichopoda HOM05D007927 ORTHO05D010029 4.6e-65 251.9 225 63.6
Phvul.002G272300 Phaseolus vulgaris HOM05D007927 ORTHO05D010029 1.3e-64 250.4 244 59.4
Gorai.006G005200 Gossypium raimondii HOM05D007927 ORTHO05D010029 8.7e-64 247.7 234 63.2
Ca_17635_v3 Cicer arietinum L. HOM05D007927 ORTHO05D010029 1.5e-63 246.9 155 78.7
CDE02G1961 Ceratophyllum demersum HOM05D007927 ORTHO05D010029 2.5e-63 246.1 230 60.0
FAN26G1905 Fragaria x ananassa HOM05D007927 ORTHO05D010029 4.3e-63 245.4 287 51.6
MELO3C023232.2 Cucumis melo HOM05D007927 ORTHO05D010029 1.5e-60 236.9 219 63.5
Lalb_Chr07g0184391 Lupinus albus HOM05D007927 ORTHO05D010029 3.8e-59 232.3 225 58.2
Os12g0189700 Oryza sativa ssp. japonica HOM05D007927 ORTHO05D010029 1.0e-56 224.2 159 70.4
Lj4C838G8 Lonicera japonica HOM05D007927 ORTHO05D010029 9.0e-53 211.1 241 54.4
SEGI_35752 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 2.2e-51 206.5 214 54.7
AagrBONN_evm.TU.Sc2ySwM_344.4939 Anthoceros agrestis HOM05D007927 ORTHO05D010029 2.7e-49 199.5 170 61.2
Pp3c24_20210 Physcomitrium patens HOM05D007927 ORTHO05D010029 1.0e-48 197.6 160 62.5
Mapoly0115s0058 Marchantia polymorpha HOM05D007927 ORTHO05D010029 4.5e-44 182.2 163 57.7
Sabra07G0086100 Salix brachista HOM05D007927 ORTHO05D010029 3.0e-40 169.5 96 83.3
Sabra05G0052800 Salix brachista HOM05D007927 ORTHO05D010029 6.3e-38 161.8 231 48.5
SEGI_09554 Sequoiadendron giganteum HOM05D007927 ORTHO05D010029 8.2e-30 134.8 102 68.6
FAN19G2631 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.0e-27 127.9 174 48.3
FAN23G0137 Fragaria x ananassa HOM05D007927 ORTHO05D010029 1.3e-27 127.5 135 53.3
Sabra07G0086200 Salix brachista HOM05D007927 ORTHO05D010029 3.5e-20 102.8 142 46.5
Cre01.g055151 Chlamydomonas reinhardtii HOM05D007927 ORTHO05D010029 4.5e-20 102.4 143 39.2
Gohir.D01G107700 Gossypium hirsutum HOM05D005170 ORTHO05D010029 4.4e-15 85.9 49 83.7
Gohir.D03G074800 Gossypium hirsutum HOM05D007927 ORTHO05D010029 4.4e-15 85.9 56 76.8
Gohir.D06G120200 Gossypium hirsutum HOM05D005170 ORTHO05D010029 5.7e-15 85.5 49 81.6
Gorai.010G138300 Gossypium raimondii HOM05D007927 ORTHO05D010029 1.7e-14 84.0 47 85.1
Gohir.D09G047700 Gossypium hirsutum HOM05D007927 ORTHO05D010029 4.8e-14 82.4 47 85.1
FvH4_1g24060 Fragaria vesca HOM05D007927 ORTHO05D010029 2.4e-13 80.1 58 70.7
Gorai.009G413100 Gossypium raimondii HOM05D007927 ORTHO05D010029 5.4e-13 79.0 47 80.9
Gohir.D04G109100 Gossypium hirsutum HOM05D007927 ORTHO05D010029 1.3e-11 74.3 47 78.7
Potri.007G105401 Populus trichocarpa HOM05D007927 ORTHO05D010029 1.3e-06 57.8 124 43.5
Gohir.D11G266900 Gossypium hirsutum HOM05D005170 ORTHO05D006985 2.8e-06 56.6 29 93.1
PRCOL_00005335 Prasinoderma coloniale HOM05D016266 ORTHO05D019595 6.3e-06 55.5 94 29.8


User provided reference genes

Program Settings