Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24292 Davidia involucrata HOM05D000846 ORTHO05D006755 6.1e-100 367.5 184 100.0
Rhsim05G0119700 Rhododendron simsii HOM05D000846 ORTHO05D006755 3.9e-14 82.4 41 97.6
vmacro19885 Vaccinium macrocarpon HOM05D000846 ORTHO05D006755 3.9e-14 82.4 41 97.6
MSTRG.16514 Avicennia marina HOM05D000846 ORTHO05D006755 5.1e-14 82.0 41 95.1
CSS0000492 Camellia sinensis var. sinensis HOM05D000846 ORTHO05D006755 5.1e-14 82.0 41 95.1
Cc02_g22620 Coffea canephora HOM05D000846 ORTHO05D006755 5.1e-14 82.0 41 95.1
ECA240G4115 Erigeron canadensis HOM05D000846 ORTHO05D006755 5.1e-14 82.0 41 95.1
Lsat_1_v5_gn_9_118641 Lactuca sativa HOM05D000846 ORTHO05D006755 5.1e-14 82.0 41 95.1
Oeu008902.1 Olea europaea HOM05D000846 ORTHO05D006755 5.1e-14 82.0 41 95.1
PSO170G2918 Papaver somniferum HOM05D000846 ORTHO05D006755 5.1e-14 82.0 41 95.1
PSO528G0036 Papaver somniferum HOM05D000846 ORTHO05D006755 5.1e-14 82.0 41 95.1
Hund15507 Selenicereus undatus HOM05D000846 ORTHO05D006755 5.1e-14 82.0 41 95.1
AUR62026329 Chenopodium quinoa HOM05D000846 ORTHO05D006755 6.7e-14 81.6 41 92.7
HanXRQChr03g0073611 Helianthus annuus HOM05D000846 ORTHO05D006755 6.7e-14 81.6 41 92.7
Lj6g0026631 Lotus japonicus HOM05D000846 ORTHO05D006755 6.7e-14 81.6 41 92.7
Medtr2g006750 Medicago truncatula HOM05D000846 ORTHO05D006755 6.7e-14 81.6 41 92.7
Peaxi162Scf00011g00530 Petunia axillaris HOM05D000846 ORTHO05D006755 6.7e-14 81.6 41 92.7
Peaxi162Scf00017g02641 Petunia axillaris HOM05D000846 ORTHO05D006755 6.7e-14 81.6 41 92.7
TPR.G8979 Trifolium pratense HOM05D000846 ORTHO05D006755 6.7e-14 81.6 41 92.7
Ah.03g132090 Amaranthus hybridus HOM05D000846 ORTHO05D006755 1.1e-13 80.9 41 92.7
EL10Ac1g00215 Beta vulgaris HOM05D000846 ORTHO05D006755 1.1e-13 80.9 41 92.7
EL10Ac5g11125 Beta vulgaris HOM05D000846 ORTHO05D006755 1.1e-13 80.9 41 92.7
EL10Ac6g13093 Beta vulgaris HOM05D000846 ORTHO05D006755 1.1e-13 80.9 41 92.7
DCAR_001823 Daucus carota HOM05D000846 ORTHO05D006755 1.1e-13 80.9 41 92.7
Migut.B00826 Erythranthe guttata HOM05D000846 ORTHO05D006755 1.1e-13 80.9 41 92.7
Nn1g08833 Nelumbo nucifera HOM05D000846 ORTHO05D006755 1.1e-13 80.9 41 95.1
Sc07g0004850 Simmondsia chinensis HOM05D000846 ORTHO05D006755 1.1e-13 80.9 41 92.7
TAR381G0552 Trochodendron aralioides HOM05D000846 ORTHO05D006755 1.1e-13 80.9 41 95.1
CAN.G798.7 Capsicum annuum HOM05D000846 ORTHO05D006755 1.5e-13 80.5 41 90.2
Ca_00067_v3 Cicer arietinum L. HOM05D000846 ORTHO05D006755 1.5e-13 80.5 41 90.2
Nitab4.5_0000816g0070 Nicotiana tabacum HOM05D000846 ORTHO05D006755 1.5e-13 80.5 41 90.2
Nitab4.5_0010336g0020 Nicotiana tabacum HOM05D000846 ORTHO05D006755 1.5e-13 80.5 41 90.2
Solyc01g104070.3 Solanum lycopersicum HOM05D000846 ORTHO05D006755 1.5e-13 80.5 41 90.2
Sopen01g046480 Solanum pennellii HOM05D000846 ORTHO05D006755 1.5e-13 80.5 41 90.2
PGSC0003DMG400023766 Solanum tuberosum HOM05D000846 ORTHO05D006755 1.5e-13 80.5 41 90.2
SGA_v2.0_scaffold110G31332 Striga asiatica HOM05D000846 ORTHO05D006755 1.5e-13 80.5 41 90.2
Thecc.02G295900 Theobroma cacao HOM05D000846 ORTHO05D006755 1.5e-13 80.5 41 92.7
GSVIVG01022879001 Vitis vinifera HOM05D000846 ORTHO05D006755 1.5e-13 80.5 41 92.7
Aqoxy6G00235 Aquilegia oxysepala HOM05D000846 ORTHO05D006755 2.0e-13 80.1 41 90.2
Nn5g28327 Nelumbo nucifera HOM05D000846 ORTHO05D006755 2.0e-13 80.1 41 95.1
Lalb_Chr20g0123491 Lupinus albus HOM05D000846 ORTHO05D006755 2.6e-13 79.7 41 90.2
Dinv19375 Davidia involucrata HOM05D000846 ORTHO05D006755 3.3e-13 79.3 41 95.1
Aa31LG9G17870 Aethionema arabicum HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
AL7G25080 Arabidopsis lyrata HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
AT4G27640 Arabidopsis thaliana HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
BcaC06g32677 Brassica carinata HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
BcaC09g50565 Brassica carinata HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
BcaNung01650 Brassica carinata HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
A01p18930 Brassica napus HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
A03p57390 Brassica napus HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
C01p23880 Brassica napus HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
C07p55610 Brassica napus HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
BolC1t02333H Brassica oleracea HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
BolC7t46041H Brassica oleracea HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
BraA01t01834Z Brassica rapa HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
BraA03t14805Z Brassica rapa HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
CARHR235340 Cardamine hirsuta HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
Ciclev10030583m.g Citrus clementina HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
Thhalv10024293m.g Eutrema salsugineum HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
FvH4_5g29150 Fragaria vesca HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
FAN04G0084 Fragaria x ananassa HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
FAN08G3691 Fragaria x ananassa HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
FAN13G1889 Fragaria x ananassa HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
FAN18G2713 Fragaria x ananassa HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
Gohir.A05G308500 Gossypium hirsutum HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
Gohir.D05G309200 Gossypium hirsutum HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
Gorai.009G329500 Gossypium raimondii HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
MBI01_g09375_MAGBIO Magnolia biondii HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
MD08G1234100 Malus domestica HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
MD15G1425400 Malus domestica HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
Prupe.1G571100 Prunus persica HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
RcHm_v2.0_Chr7g0221821 Rosa chinensis HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
Sp7g25600 Schrenkiella parvula HOM05D000846 ORTHO05D006755 4.4e-13 79.0 41 92.7
Carub.0007s1321 Capsella rubella HOM05D000846 ORTHO05D006755 5.7e-13 78.6 41 90.2
Glyma.08G187000 Glycine max HOM05D000846 ORTHO05D006755 7.4e-13 78.2 41 90.2
Glyma.15G046000 Glycine max HOM05D000846 ORTHO05D006755 7.4e-13 78.2 41 90.2
Os03g0261950 Oryza sativa ssp. japonica HOM05D000846 ORTHO05D006755 7.4e-13 78.2 41 87.8
Phvul.006G215200 Phaseolus vulgaris HOM05D000846 ORTHO05D006755 7.4e-13 78.2 41 90.2
VMungo0540G0381 Vigna mungo HOM05D000846 ORTHO05D006755 7.4e-13 78.2 41 90.2
Zm00001eb011450 Zea mays HOM05D000846 ORTHO05D006755 7.4e-13 78.2 41 87.8
Cpa.g.sc39.49 Carica papaya HOM05D000846 ORTHO05D006755 1.3e-12 77.4 41 90.2
CiPaw.06G146600 Carya illinoinensis HOM05D000846 ORTHO05D006755 1.3e-12 77.4 41 90.2
COL.COLO4_27511 Corchorus olitorius HOM05D000846 ORTHO05D006755 1.3e-12 77.4 41 90.2
Duzib251G0663 Durio zibethinus HOM05D000846 ORTHO05D006755 1.3e-12 77.4 41 90.2
Eucgr.I02730 Eucalyptus grandis HOM05D000846 ORTHO05D006755 1.3e-12 77.4 41 90.2
Manes.03G080600 Manihot esculenta HOM05D000846 ORTHO05D006755 1.3e-12 77.4 41 90.2
Psat1g221240 Pisum sativum HOM05D000846 ORTHO05D006755 1.3e-12 77.4 41 90.2
QL02p099167 Quercus lobata HOM05D000846 ORTHO05D006755 1.3e-12 77.4 41 90.2
ClCG05G009620 Citrullus lanatus HOM05D000846 ORTHO05D006755 1.7e-12 77.0 41 87.8
MELO3C019464.2 Cucumis melo HOM05D000846 ORTHO05D006755 1.7e-12 77.0 41 87.8
CsaV3_3G019110 Cucumis sativus L. HOM05D000846 ORTHO05D006755 1.7e-12 77.0 41 87.8
PGR142G3343 Punica granatum HOM05D000846 ORTHO05D006755 1.7e-12 77.0 41 87.8
Sed0025663 Sechium edule HOM05D000846 ORTHO05D006755 1.7e-12 77.0 41 87.8
THA.LOC104805711 Tarenaya hassleriana HOM05D000846 ORTHO05D006755 1.7e-12 77.0 41 87.8
unitig_21.g20912 Utricularia gibba HOM05D000846 ORTHO05D006755 1.7e-12 77.0 41 90.2
Atru.chr11.1221 Acer truncatum HOM05D000846 ORTHO05D006755 3.7e-12 75.9 41 85.4
Cfa005511 Carpinus fangiana HOM05D000846 ORTHO05D006755 3.7e-12 75.9 41 87.8
Haze_01711 Corylus avellana HOM05D000846 ORTHO05D006755 3.7e-12 75.9 41 87.8
Potri.008G085800 Populus trichocarpa HOM05D000846 ORTHO05D006755 3.7e-12 75.9 41 87.8
Potri.010G169800 Populus trichocarpa HOM05D000846 ORTHO05D006755 3.7e-12 75.9 41 87.8
AUR62026527 Chenopodium quinoa HOM05D000846 ORTHO05D006755 4.8e-12 75.5 41 85.4
Sabra10G0129600 Salix brachista HOM05D000846 ORTHO05D006755 5.3e-11 72.0 41 85.4
ATR0665G276 Amborella trichopoda HOM05D000846 ORTHO05D006755 1.2e-10 70.9 41 82.9
CSS0018741 Camellia sinensis var. sinensis HOM05D000846 ORTHO05D006755 1.6e-10 70.5 41 80.5
SEGI_41093 Sequoiadendron giganteum HOM05D000846 ORTHO05D006755 1.6e-10 70.5 41 80.5
SHI37023 Sapria himalayana HOM05D000846 ORTHO05D006755 2.6e-10 69.7 41 78.0
Lsat_1_v5_gn_7_78561 Lactuca sativa HOM05D000846 ORTHO05D006755 7.7e-10 68.2 41 73.2
HanXRQChr16g0511911 Helianthus annuus HOM05D000846 ORTHO05D006755 2.5e-08 63.2 41 65.9
AagrBONN_evm.TU.Sc2ySwM_228.251 Anthoceros agrestis HOM05D000846 ORTHO05D006755 7.2e-08 61.6 41 68.3
ECA236G1359 Erigeron canadensis HOM05D000846 ORTHO05D006755 2.1e-07 60.1 41 65.9
Mapoly0029s0100 Marchantia polymorpha HOM05D000846 ORTHO05D006755 2.1e-07 60.1 41 61.0
SMO364G0838 Selaginella moellendorffii HOM05D000846 ORTHO05D006755 3.6e-07 59.3 41 61.0


User provided reference genes

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