Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24264 Davidia involucrata HOM05D003483 ORTHO05D004101 1.4e-117 426.4 229 100.0
Hma1.2p1_0217F.1_g091970 Hydrangea macrophylla HOM05D003483 ORTHO05D004101 1.1e-74 283.9 216 73.6
CSS0026849 Camellia sinensis var. sinensis HOM05D003483 ORTHO05D004101 1.7e-67 260.0 211 70.1
GSVIVG01022998001 Vitis vinifera HOM05D003483 ORTHO05D004101 2.2e-67 259.6 214 72.0
TAR376G1167 Trochodendron aralioides HOM05D003483 ORTHO05D004101 4.2e-66 255.4 215 66.5
COL.COLO4_17881 Corchorus olitorius HOM05D003483 ORTHO05D004101 1.8e-64 250.0 213 66.2
Gohir.A04G126900 Gossypium hirsutum HOM05D003483 ORTHO05D004101 2.0e-63 246.5 220 62.7
Duzib248G1166 Durio zibethinus HOM05D003483 ORTHO05D004101 5.7e-63 245.0 216 64.4
Gorai.012G160700 Gossypium raimondii HOM05D003483 ORTHO05D004101 1.3e-62 243.8 220 61.8
QL02p098403 Quercus lobata HOM05D003483 ORTHO05D004101 1.7e-62 243.4 217 63.1
Peaxi162Scf00011g00242 Petunia axillaris HOM05D003483 ORTHO05D004101 3.1e-61 239.2 208 66.3
PGSC0003DMG400023753 Solanum tuberosum HOM05D003483 ORTHO05D004101 9.1e-61 237.7 193 66.3
VMungo0540G1714 Vigna mungo HOM05D003483 ORTHO05D004101 4.5e-60 235.3 191 64.9
Cc02_g22350 Coffea canephora HOM05D003483 ORTHO05D004101 5.9e-60 235.0 216 63.9
vmacro19900 Vaccinium macrocarpon HOM05D003483 ORTHO05D004101 5.9e-60 235.0 267 55.4
Ciclev10002308m.g Citrus clementina HOM05D003483 ORTHO05D004101 7.7e-60 234.6 213 64.8
CiPaw.06G148300 Carya illinoinensis HOM05D003483 ORTHO05D004101 2.9e-59 232.6 200 63.5
Eucgr.I02715 Eucalyptus grandis HOM05D003483 ORTHO05D004101 2.9e-59 232.6 218 62.8
Manes.07G014500 Manihot esculenta HOM05D003483 ORTHO05D004101 3.8e-59 232.3 214 63.1
Phvul.006G213100 Phaseolus vulgaris HOM05D003483 ORTHO05D004101 6.5e-59 231.5 191 64.9
Cfa005534 Carpinus fangiana HOM05D003483 ORTHO05D004101 8.5e-59 231.1 212 61.3
Nitab4.5_0003819g0040 Nicotiana tabacum HOM05D003483 ORTHO05D004101 8.5e-59 231.1 144 81.2
MSTRG.5236 Avicennia marina HOM05D003483 ORTHO05D004101 1.1e-58 230.7 197 66.0
PGR142G0005 Punica granatum HOM05D003483 ORTHO05D004101 5.5e-58 228.4 206 64.6
Glyma.08G185000 Glycine max HOM05D003483 ORTHO05D004101 7.2e-58 228.0 141 79.4
Potri.003G020700 Populus trichocarpa HOM05D003483 ORTHO05D004101 7.2e-58 228.0 144 78.5
ATR0684G013 Amborella trichopoda HOM05D003483 ORTHO05D004101 4.7e-57 225.3 216 61.6
Nitab4.5_0002245g0170 Nicotiana tabacum HOM05D003483 ORTHO05D004101 1.8e-56 223.4 214 63.6
Medtr2g007640 Medicago truncatula HOM05D003483 ORTHO05D004101 2.3e-56 223.0 197 61.4
Glyma.15G047700 Glycine max HOM05D003483 ORTHO05D004101 3.0e-56 222.6 212 59.0
MBI03_g28296_MAGBIO Magnolia biondii HOM05D003483 ORTHO05D004101 4.0e-56 222.2 216 61.1
CDE02G1133 Ceratophyllum demersum HOM05D003483 ORTHO05D004101 6.8e-56 221.5 197 65.0
MD15G1421400 Malus domestica HOM05D003483 ORTHO05D004101 6.8e-56 221.5 144 75.7
Hma1.2p1_0557F.1_g178380 Hydrangea macrophylla HOM05D003483 ORTHO05D004101 1.2e-55 220.7 203 61.1
CSS0038053 Camellia sinensis var. sinensis HOM05D003483 ORTHO05D004101 2.0e-55 219.9 201 60.7
ECA240G0807 Erigeron canadensis HOM05D003483 ORTHO05D004101 2.0e-55 219.9 129 82.9
Rhsim11G0130100 Rhododendron simsii HOM05D003483 ORTHO05D004101 3.4e-55 219.2 144 77.1
SalBow6G5560 Salvia bowleyana HOM05D003483 ORTHO05D004101 3.4e-55 219.2 146 74.7
vmacro01768 Vaccinium macrocarpon HOM05D003483 ORTHO05D004101 5.7e-55 218.4 144 77.1
Thecc.02G039900 Theobroma cacao HOM05D003483 ORTHO05D004101 7.5e-55 218.0 207 62.3
COL.COLO4_17880 Corchorus olitorius HOM05D003483 ORTHO05D004101 9.8e-55 217.6 193 60.6
Lsat_1_v5_gn_9_118240 Lactuca sativa HOM05D003483 ORTHO05D004101 1.3e-54 217.2 185 65.4
Lj6g0022843 Lotus japonicus HOM05D003483 ORTHO05D004101 1.7e-54 216.9 144 73.6
Nn1g08897 Nelumbo nucifera HOM05D003483 ORTHO05D004101 2.8e-54 216.1 212 60.4
SalBow6G7247 Salvia bowleyana HOM05D003483 ORTHO05D004101 2.8e-54 216.1 199 61.3
Ca_00085_v3 Cicer arietinum L. HOM05D003483 ORTHO05D004101 3.7e-54 215.7 186 63.4
TAR381G1595 Trochodendron aralioides HOM05D003483 ORTHO05D004101 3.7e-54 215.7 208 60.6
CAN.G1577.5 Capsicum annuum HOM05D003483 ORTHO05D004101 4.8e-54 215.3 215 59.5
PGR142G1721 Punica granatum HOM05D003483 ORTHO05D004101 4.8e-54 215.3 147 72.1
Manes.07G014600 Manihot esculenta HOM05D003483 ORTHO05D004101 6.3e-54 214.9 202 59.4
Psat1g224320 Pisum sativum HOM05D003483 ORTHO05D004101 6.3e-54 214.9 150 72.0
arahy.Tifrunner.gnm1.ann1.G5V2PN Arachis hypogaea HOM05D003483 ORTHO05D004101 1.1e-53 214.2 179 64.8
Ca_00080_v3 Cicer arietinum L. HOM05D003483 ORTHO05D004101 1.1e-53 214.2 202 60.9
Gohir.D01G168600 Gossypium hirsutum HOM05D003483 ORTHO05D004101 1.1e-53 214.2 151 70.9
Gorai.002G209300 Gossypium raimondii HOM05D003483 ORTHO05D004101 1.1e-53 214.2 151 70.9
Thecc.02G039800 Theobroma cacao HOM05D003483 ORTHO05D004101 1.1e-53 214.2 151 71.5
HanXRQChr03g0066831 Helianthus annuus HOM05D003483 ORTHO05D004101 1.4e-53 213.8 144 76.4
MD15G1421500 Malus domestica HOM05D003483 ORTHO05D004101 1.4e-53 213.8 179 63.7
TPR.G2131 Trifolium pratense HOM05D003483 ORTHO05D004101 1.4e-53 213.8 212 59.9
CANSAT11G2084 Cannabis sativa HOM05D003483 ORTHO05D004101 4.1e-53 212.2 213 59.6
Eucgr.I02716 Eucalyptus grandis HOM05D003483 ORTHO05D004101 4.1e-53 212.2 198 61.1
Lj9A307T41 Lonicera japonica HOM05D003483 ORTHO05D004101 4.1e-53 212.2 144 73.6
Gohir.A01G177800 Gossypium hirsutum HOM05D003483 ORTHO05D004101 7.0e-53 211.5 198 58.1
Sabra01G0161900 Salix brachista HOM05D003483 ORTHO05D004101 7.0e-53 211.5 204 58.8
Atru.chr6.836 Acer truncatum HOM05D003483 ORTHO05D004101 9.1e-53 211.1 147 72.8
PSO017G4111 Papaver somniferum HOM05D003483 ORTHO05D004101 9.1e-53 211.1 147 72.1
Glyma.08G185800 Glycine max HOM05D003483 ORTHO05D004101 1.2e-52 210.7 181 61.9
CSS0036812 Camellia sinensis var. sinensis HOM05D003483 ORTHO05D004101 1.6e-52 210.3 215 56.7
Gohir.D04G171800 Gossypium hirsutum HOM05D003483 ORTHO05D004101 1.6e-52 210.3 212 59.9
Glyma.15G047000 Glycine max HOM05D003483 ORTHO05D004101 3.5e-52 209.1 149 69.1
CiPaw.05G043400 Carya illinoinensis HOM05D003483 ORTHO05D004101 4.5e-52 208.8 206 57.8
FAN13G0976 Fragaria x ananassa HOM05D003483 ORTHO05D004101 4.5e-52 208.8 190 59.5
Cpa.g.sc2.4 Carica papaya HOM05D003483 ORTHO05D004101 5.9e-52 208.4 207 57.5
Dinv19357 Davidia involucrata HOM05D003483 ORTHO05D004101 5.9e-52 208.4 209 58.9
FAN18G3047 Fragaria x ananassa HOM05D003483 ORTHO05D004101 7.7e-52 208.0 190 58.9
Cpa.g.sc2.3 Carica papaya HOM05D003483 ORTHO05D004101 1.0e-51 207.6 148 70.9
Nn1g08607 Nelumbo nucifera HOM05D003483 ORTHO05D004101 1.0e-51 207.6 198 63.1
Zm00001eb054390 Zea mays HOM05D003483 ORTHO05D004101 2.3e-51 206.5 133 77.4
Sc06g0009790 Simmondsia chinensis HOM05D003483 ORTHO05D004101 2.9e-51 206.1 188 58.5
Haze_01644 Corylus avellana HOM05D003483 ORTHO05D004101 6.6e-51 204.9 213 55.9
Prupe.1G566700 Prunus persica HOM05D003483 ORTHO05D004101 8.6e-51 204.5 210 59.0
QL02p098396 Quercus lobata HOM05D003483 ORTHO05D004101 8.6e-51 204.5 159 66.7
CAN.G336.10 Capsicum annuum HOM05D003483 ORTHO05D004101 1.5e-50 203.8 151 68.2
Migut.N01039 Erythranthe guttata HOM05D003483 ORTHO05D004101 2.5e-50 203.0 149 70.5
EL10Ac9g22715 Beta vulgaris HOM05D003483 ORTHO05D004101 3.3e-50 202.6 145 70.3
CANSAT11G2020 Cannabis sativa HOM05D003483 ORTHO05D004101 3.3e-50 202.6 155 70.3
FvH4_5g29660 Fragaria vesca HOM05D003483 ORTHO05D004101 3.3e-50 202.6 212 57.5
SGA_v2.0_scaffold145G36069 Striga asiatica HOM05D003483 ORTHO05D004101 3.3e-50 202.6 157 68.8
GSVIVG01022995001 Vitis vinifera HOM05D003483 ORTHO05D004101 3.3e-50 202.6 147 70.1
CsaV3_1G045010 Cucumis sativus L. HOM05D003483 ORTHO05D004101 4.2e-50 202.2 203 58.6
Sed0016447 Sechium edule HOM05D003483 ORTHO05D004101 5.5e-50 201.8 204 59.3
arahy.Tifrunner.gnm1.ann1.MUYK2J Arachis hypogaea HOM05D003483 ORTHO05D004101 7.2e-50 201.4 135 74.8
Actinidia39049 Actinidia chinensis HOM05D003483 ORTHO05D004101 9.5e-50 201.1 212 54.2
Lj6g0009955 Lotus japonicus HOM05D003483 ORTHO05D004101 1.2e-49 200.7 175 61.1
Ah.01g002720 Amaranthus hybridus HOM05D003483 ORTHO05D004101 1.6e-49 200.3 153 68.0
arahy.Tifrunner.gnm1.ann1.021TT5 Arachis hypogaea HOM05D003483 ORTHO05D004101 3.6e-49 199.1 148 69.6
Potri.001G209600 Populus trichocarpa HOM05D003483 ORTHO05D004101 3.6e-49 199.1 201 56.2
MELO3C010097.2 Cucumis melo HOM05D003483 ORTHO05D004101 4.7e-49 198.7 207 56.5
FAN04G0580 Fragaria x ananassa HOM05D003483 ORTHO05D004101 4.7e-49 198.7 206 58.7
Psat1g224560 Pisum sativum HOM05D003483 ORTHO05D004101 4.7e-49 198.7 213 56.8
VMungo0540G0086 Vigna mungo HOM05D003483 ORTHO05D004101 4.7e-49 198.7 178 58.4
Cc02_g22380 Coffea canephora HOM05D003483 ORTHO05D004101 6.1e-49 198.4 214 57.9
RcHm_v2.0_Chr7g0222941 Rosa chinensis HOM05D003483 ORTHO05D004101 6.1e-49 198.4 212 58.0
Aqoxy5G02410 Aquilegia oxysepala HOM05D003483 ORTHO05D004101 8.0e-49 198.0 151 67.5
HanXRQChr06g0185051 Helianthus annuus HOM05D003483 ORTHO05D004101 8.0e-49 198.0 144 70.1
unitig_699.g19861 Utricularia gibba HOM05D003483 ORTHO05D004101 1.0e-48 197.6 192 56.2
Lalb_Chr15g0090651 Lupinus albus HOM05D003483 ORTHO05D004101 3.0e-48 196.1 162 64.8
Medtr2g007300 Medicago truncatula HOM05D003483 ORTHO05D004101 4.0e-48 195.7 210 54.8
Sabra03G0012000 Salix brachista HOM05D003483 ORTHO05D004101 4.0e-48 195.7 229 52.4
Solyc01g104320.4 Solanum lycopersicum HOM05D003483 ORTHO05D004101 5.2e-48 195.3 171 64.3
SalBow6G5065 Salvia bowleyana HOM05D003483 ORTHO05D004101 1.2e-47 194.1 182 59.9
SalBow6G7249 Salvia bowleyana HOM05D003483 ORTHO05D004101 1.2e-47 194.1 182 59.9
Phvul.006G214200 Phaseolus vulgaris HOM05D003483 ORTHO05D004101 1.5e-47 193.7 144 67.4
vmacro01767 Vaccinium macrocarpon HOM05D003483 ORTHO05D004101 2.0e-47 193.4 134 75.4
Os03g0704100 Oryza sativa ssp. japonica HOM05D003483 ORTHO05D004101 2.6e-47 193.0 155 66.5
AUR62015054 Chenopodium quinoa HOM05D003483 ORTHO05D004101 3.4e-47 192.6 214 55.1
Solyc11g044530.2 Solanum lycopersicum HOM05D003483 ORTHO05D004101 3.4e-47 192.6 149 67.8
TWI59G0966 Tripterygium wilfordii HOM05D003483 ORTHO05D004101 5.7e-47 191.8 211 55.0
Cfa005532 Carpinus fangiana HOM05D003483 ORTHO05D004101 9.8e-47 191.0 205 55.1
Pp3c23_15450 Physcomitrium patens HOM05D003483 ORTHO05D004101 2.8e-46 189.5 134 67.9
AagrBONN_evm.TU.Sc2ySwM_344.1832 Anthoceros agrestis HOM05D003483 ORTHO05D004101 5.4e-45 185.3 143 65.0
Lsat_1_v5_gn_9_118261 Lactuca sativa HOM05D003483 ORTHO05D004101 4.5e-44 182.2 207 52.7
SMO347G0483 Selaginella moellendorffii HOM05D003483 ORTHO05D004101 4.5e-44 182.2 132 67.4
Mapoly0103s0070 Marchantia polymorpha HOM05D003483 ORTHO05D004101 7.8e-44 181.4 139 64.0
Oeu000193.1 Olea europaea HOM05D003483 ORTHO05D004101 7.8e-44 181.4 178 61.2
DCAR_021518 Daucus carota HOM05D003483 ORTHO05D004101 6.6e-43 178.3 213 52.6
ECA240G4797 Erigeron canadensis HOM05D003483 ORTHO05D008021 1.5e-42 177.2 135 67.4
Haze_01648 Corylus avellana HOM05D003483 ORTHO05D004101 1.9e-42 176.8 178 57.9
MSTRG.5233 Avicennia marina HOM05D003483 ORTHO05D004101 1.2e-41 174.1 128 71.9
Peaxi162Scf00152g01330 Petunia axillaris HOM05D003483 ORTHO05D004101 2.1e-41 173.3 212 50.5
Oeu000192.1 Olea europaea HOM05D003483 ORTHO05D004101 4.7e-41 172.2 135 68.9
BcaC06g33930 Brassica carinata HOM05D003483 ORTHO05D004101 8.0e-41 171.4 132 63.6
C07p35050 Brassica napus HOM05D003483 ORTHO05D004101 8.0e-41 171.4 132 63.6
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 8.0e-41 171.4 132 63.6
Aa31LG2G6290 Aethionema arabicum HOM05D003483 ORTHO05D004101 1.0e-40 171.0 156 56.4
A06p42270 Brassica napus HOM05D003483 ORTHO05D004101 1.4e-40 170.6 132 63.6
BraA06t27143Z Brassica rapa HOM05D003483 ORTHO05D004101 1.4e-40 170.6 132 63.6
AL5G14750 Arabidopsis lyrata HOM05D003483 ORTHO05D004101 1.8e-40 170.2 165 53.3
AT3G26070 Arabidopsis thaliana HOM05D003483 ORTHO05D004101 1.8e-40 170.2 165 53.3
Thhalv10004837m.g Eutrema salsugineum HOM05D003483 ORTHO05D004101 2.3e-40 169.9 132 62.1
Hund01591 Selenicereus undatus HOM05D003483 ORTHO05D004101 2.3e-40 169.9 188 54.8
CARHR147060 Cardamine hirsuta HOM05D003483 ORTHO05D004101 3.1e-40 169.5 132 62.9
Ciclev10003624m.g Citrus clementina HOM05D003483 ORTHO05D004101 3.1e-40 169.5 193 56.0
Carub.0005s0393 Capsella rubella HOM05D003483 ORTHO05D004101 4.0e-40 169.1 155 55.5
THA.LOC104825685 Tarenaya hassleriana HOM05D003483 ORTHO05D004101 6.8e-40 168.3 127 66.1
AL5G14760 Arabidopsis lyrata HOM05D003483 ORTHO05D004101 1.5e-39 167.2 151 57.0
THA.LOC104824018 Tarenaya hassleriana HOM05D003483 ORTHO05D004101 1.5e-39 167.2 177 52.5
Lj6g0024243 Lotus japonicus HOM05D003483 ORTHO05D004101 3.4e-39 166.0 159 57.9
BcaC06g31094 Brassica carinata HOM05D003483 ORTHO05D004101 4.4e-39 165.6 200 49.5
Sp2g15270 Schrenkiella parvula HOM05D003483 ORTHO05D004101 4.9e-38 162.2 132 60.6
AT3G26080 Arabidopsis thaliana HOM05D003483 ORTHO05D004101 8.3e-38 161.4 152 56.6
Nitab4.5_0000044g0170 Nicotiana tabacum HOM05D003483 ORTHO05D004101 1.1e-37 161.0 190 50.0
Carub.0005s0394 Capsella rubella HOM05D003483 ORTHO05D004101 3.2e-37 159.5 132 58.3
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 7.0e-37 158.3 158 61.4
Sopen11g020090 Solanum pennellii HOM05D003483 ORTHO05D004101 4.6e-36 155.6 123 67.5
AUR62017511 Chenopodium quinoa HOM05D003483 ORTHO05D004101 8.6e-35 151.4 97 76.3
Nitab4.5_0001783g0130 Nicotiana tabacum HOM05D003483 ORTHO05D004101 8.6e-35 151.4 97 78.4
HPP92_011153 Vanilla planifolia HOM05D003483 ORTHO05D004101 1.1e-32 144.4 144 56.2
Duzib132G0067 Durio zibethinus HOM05D003483 ORTHO05D004101 1.3e-30 137.5 151 51.0
AUR62015051 Chenopodium quinoa HOM05D003483 ORTHO05D004101 4.9e-30 135.6 144 52.1
BcaC06g31097 Brassica carinata HOM05D000468 ORTHO05D004101 8.3e-30 134.8 97 67.0
AUR62017510 Chenopodium quinoa HOM05D003483 ORTHO05D004101 8.3e-30 134.8 162 48.8
PSO170G3925 Papaver somniferum HOM05D003483 ORTHO05D004101 8.3e-30 134.8 147 51.7
arahy.Tifrunner.gnm1.ann1.19GFYA Arachis hypogaea HOM05D003483 ORTHO05D004101 1.6e-28 130.6 213 43.2
Sopen01g046770 Solanum pennellii HOM05D003483 ORTHO05D004101 2.1e-28 130.2 139 58.3
ClCG09G014000 Citrullus lanatus HOM05D003483 ORTHO05D004101 1.3e-27 127.5 152 51.3
Hund01593 Selenicereus undatus HOM05D003483 ORTHO05D004101 1.7e-27 127.1 214 41.6
Cre03.g188650 Chlamydomonas reinhardtii HOM05D003483 ORTHO05D004101 3.0e-27 126.3 129 49.6
Haze_01640 Corylus avellana HOM05D003483 ORTHO05D004101 6.6e-27 125.2 153 50.3
TPR.G22934 Trifolium pratense HOM05D003483 ORTHO05D004101 6.6e-27 125.2 72 83.3
Haze_01645 Corylus avellana HOM05D003483 ORTHO05D004101 1.9e-26 123.6 153 49.7
MCO03G426 Micromonas commoda HOM05D003483 ORTHO05D004101 2.8e-25 119.8 130 50.8
PRCOL_00005437 Prasinoderma coloniale HOM05D003483 ORTHO05D004101 3.6e-25 119.4 122 50.8
Sopen01g046760 Solanum pennellii HOM05D003483 ORTHO05D004101 1.8e-24 117.1 65 84.6
Actinidia00213 Actinidia chinensis HOM05D003483 ORTHO05D004101 3.1e-24 116.3 113 55.8
TPR.G2065 Trifolium pratense HOM05D003483 ORTHO05D004101 3.1e-24 116.3 64 84.4
TPR.G30715 Trifolium pratense HOM05D003483 ORTHO05D004101 8.3e-22 108.2 140 47.9
RcHm_v2.0_Chr7g0222921 Rosa chinensis HOM05D003483 ORTHO05D004101 1.4e-21 107.5 243 37.4
Actinidia17473 Actinidia chinensis HOM05D004517 ORTHO05D005366 1.6e-20 104.0 69 82.6
MCO15G394 Micromonas commoda HOM05D003483 ORTHO05D004101 7.3e-18 95.1 129 41.1
CBR_g3139 Chara braunii HOM05D003483 ORTHO05D004101 4.7e-17 92.4 159 40.9
TPR.G31211 Trifolium pratense HOM05D003483 ORTHO05D004101 2.1e-12 77.0 51 76.5
PRCOL_00003721 Prasinoderma coloniale HOM05D003483 ORTHO05D002254 6.2e-09 65.5 134 32.8
Actinidia24676 Actinidia chinensis HOM05D004517 ORTHO05D005366 6.9e-08 62.0 34 91.2
MCO10G165 Micromonas commoda HOM05D003483 ORTHO05D268554 2.0e-07 60.5 148 27.7
HPP92_027704 Vanilla planifolia HOM05D003483 ORTHO05D004101 1.7e-06 57.4 51 64.7


User provided reference genes

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