Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24225 Davidia involucrata HOM05D005078 ORTHO05D007574 1.4e-34 149.1 74 100.0
Dinv24223 Davidia involucrata HOM05D005078 ORTHO05D007574 4.2e-23 110.9 59 94.9
Dinv19325 Davidia involucrata HOM05D005078 ORTHO05D007574 5.4e-23 110.5 59 94.9
DCAR_001802 Daucus carota HOM05D005078 ORTHO05D007574 7.1e-23 110.2 59 93.2
Atru.chr6.903 Acer truncatum HOM05D005078 ORTHO05D007574 1.2e-22 109.4 59 91.5
Lj9A318G98 Lonicera japonica HOM05D005078 ORTHO05D007574 1.6e-22 109.0 59 93.2
Thecc.02G143700 Theobroma cacao HOM05D005078 ORTHO05D007574 1.6e-22 109.0 59 91.5
Oeu037204.1 Olea europaea HOM05D005078 ORTHO05D007574 3.5e-22 107.8 59 89.8
PGR142G3913 Punica granatum HOM05D005078 ORTHO05D007574 3.5e-22 107.8 59 91.5
RcHm_v2.0_Chr7g0225491 Rosa chinensis HOM05D005078 ORTHO05D007574 3.5e-22 107.8 59 91.5
Actinidia04428 Actinidia chinensis HOM05D005078 ORTHO05D007574 4.6e-22 107.5 59 91.5
Ciclev10000359m.g Citrus clementina HOM05D005078 ORTHO05D007574 4.6e-22 107.5 59 89.8
COL.COLO4_20871 Corchorus olitorius HOM05D005078 ORTHO05D007574 4.6e-22 107.5 59 89.8
MD08G1222200 Malus domestica HOM05D005078 ORTHO05D007574 4.6e-22 107.5 59 91.5
MD15G1415600 Malus domestica HOM05D005078 ORTHO05D007574 4.6e-22 107.5 59 91.5
Prupe.1G560000 Prunus persica HOM05D005078 ORTHO05D007574 4.6e-22 107.5 59 91.5
TAR628G0147 Trochodendron aralioides HOM05D005078 ORTHO05D007574 4.6e-22 107.5 59 91.5
arahy.Tifrunner.gnm1.ann1.BEU0Z4 Arachis hypogaea HOM05D005078 ORTHO05D007574 6.0e-22 107.1 59 89.8
arahy.Tifrunner.gnm1.ann1.T96GLE Arachis hypogaea HOM05D005078 ORTHO05D007574 6.0e-22 107.1 59 89.8
arahy.Tifrunner.gnm1.ann1.TCU5QQ Arachis hypogaea HOM05D005078 ORTHO05D007574 6.0e-22 107.1 59 89.8
Cc02_g21860 Coffea canephora HOM05D005078 ORTHO05D007574 6.0e-22 107.1 59 89.8
Duzib052G0049 Durio zibethinus HOM05D005078 ORTHO05D007574 6.0e-22 107.1 59 89.8
FvH4_5g30610 Fragaria vesca HOM05D005078 ORTHO05D007574 7.8e-22 106.7 59 89.8
FAN13G1064 Fragaria x ananassa HOM05D005078 ORTHO05D007574 7.8e-22 106.7 59 89.8
FAN18G1729 Fragaria x ananassa HOM05D005078 ORTHO05D007574 7.8e-22 106.7 59 89.8
HanXRQChr11g0337601 Helianthus annuus HOM05D005078 ORTHO05D007574 7.8e-22 106.7 59 89.8
QL08p030872 Quercus lobata HOM05D005078 ORTHO05D007574 7.8e-22 106.7 59 89.8
QL11p019326 Quercus lobata HOM05D005078 ORTHO05D007574 7.8e-22 106.7 59 89.8
Gohir.D02G194900 Gossypium hirsutum HOM05D005078 ORTHO05D007574 1.3e-21 105.9 59 88.1
Gorai.005G217700 Gossypium raimondii HOM05D005078 ORTHO05D007574 1.3e-21 105.9 59 88.1
Oeu047373.1 Olea europaea HOM05D005078 ORTHO05D007574 1.3e-21 105.9 59 88.1
TWI23G1171 Tripterygium wilfordii HOM05D005078 ORTHO05D007574 1.3e-21 105.9 59 89.8
vmacro19912 Vaccinium macrocarpon HOM05D005078 ORTHO05D007574 1.7e-21 105.5 59 89.8
Manes.10G130600 Manihot esculenta HOM05D005078 ORTHO05D007574 2.3e-21 105.1 59 88.1
Rhsim05G0111000 Rhododendron simsii HOM05D005078 ORTHO05D007574 2.3e-21 105.1 59 89.8
SGA_v2.0_scaffold332G48941 Striga asiatica HOM05D005078 ORTHO05D007574 2.3e-21 105.1 59 86.4
Cfa005576 Carpinus fangiana HOM05D005078 ORTHO05D007574 3.9e-21 104.4 59 88.1
ECA236G3503 Erigeron canadensis HOM05D005078 ORTHO05D007574 3.9e-21 104.4 59 88.1
CiPaw.06G150900 Carya illinoinensis HOM05D005078 ORTHO05D007574 5.1e-21 104.0 59 88.1
ClCG09G013630 Citrullus lanatus HOM05D005078 ORTHO05D007574 5.1e-21 104.0 56 89.3
Eucgr.I02694 Eucalyptus grandis HOM05D005078 ORTHO05D007574 5.1e-21 104.0 59 86.4
GSVIVG01029707001 Vitis vinifera HOM05D005078 ORTHO05D007574 5.1e-21 104.0 59 88.1
CSS0037915 Camellia sinensis var. sinensis HOM05D005078 ORTHO05D007574 6.6e-21 103.6 59 88.1
Migut.B00641 Erythranthe guttata HOM05D005078 ORTHO05D007574 6.6e-21 103.6 59 86.4
Lsat_1_v5_gn_7_79780 Lactuca sativa HOM05D005078 ORTHO05D007574 6.6e-21 103.6 59 88.1
MBI03_g13502_MAGBIO Magnolia biondii HOM05D005078 ORTHO05D007574 6.6e-21 103.6 59 86.4
CsaV3_7G006040 Cucumis sativus L. HOM05D005078 ORTHO05D007574 1.1e-20 102.8 56 87.5
Glyma.08G075100 Glycine max HOM05D005078 ORTHO05D007574 1.1e-20 102.8 59 86.4
Sed0005211 Sechium edule HOM05D005078 ORTHO05D007574 1.1e-20 102.8 56 87.5
Aqoxy6G00300 Aquilegia oxysepala HOM05D005078 ORTHO05D007574 1.5e-20 102.4 59 86.4
MELO3C018688.2 Cucumis melo HOM05D005078 ORTHO05D007574 1.5e-20 102.4 55 89.1
VMungo0251G0911 Vigna mungo HOM05D005078 ORTHO05D007574 1.5e-20 102.4 59 86.4
Lj4g0026324 Lotus japonicus HOM05D005078 ORTHO05D007574 1.9e-20 102.1 59 86.4
Lalb_Chr07g0189431 Lupinus albus HOM05D005078 ORTHO05D007574 1.9e-20 102.1 59 86.4
Phvul.002G206400 Phaseolus vulgaris HOM05D005078 ORTHO05D007574 3.3e-20 101.3 59 84.7
CANSAT56G3597 Cannabis sativa HOM05D005078 ORTHO05D007574 4.3e-20 100.9 59 81.4
Sed0011242 Sechium edule HOM05D005078 ORTHO05D007574 4.3e-20 100.9 56 87.5
AL3G33190 Arabidopsis lyrata HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 81.4
AT3G19720 Arabidopsis thaliana HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 81.4
BcaB04g20681 Brassica carinata HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 81.4
BcaC09g48935 Brassica carinata HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 81.4
A01p34970 Brassica napus HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 81.4
C01p44380 Brassica napus HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 81.4
BolC1t04403H Brassica oleracea HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 81.4
BraA01t03580Z Brassica rapa HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 81.4
CSS0009626 Camellia sinensis var. sinensis HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 86.4
Carub.0003s1960 Capsella rubella HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 81.4
CARHR095240 Cardamine hirsuta HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 81.4
Ca_18334_v3 Cicer arietinum L. HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 84.7
Medtr4g094300 Medicago truncatula HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 84.7
Psat7g097600 Pisum sativum HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 84.7
Sp3g17760 Schrenkiella parvula HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 81.4
TPR.G31481 Trifolium pratense HOM05D005078 ORTHO05D007574 5.6e-20 100.5 59 84.7
Glyma.05G120400 Glycine max HOM05D005078 ORTHO05D007574 7.3e-20 100.1 59 84.7
PSO170G4843 Papaver somniferum HOM05D005078 ORTHO05D007574 7.3e-20 100.1 59 84.7
PSO528G0068 Papaver somniferum HOM05D005078 ORTHO05D007574 7.3e-20 100.1 59 84.7
Potri.006G254900 Populus trichocarpa HOM05D005078 ORTHO05D007574 7.3e-20 100.1 59 83.1
Peaxi162Scf00003g03733 Petunia axillaris HOM05D005078 ORTHO05D007574 9.6e-20 99.8 59 81.4
SalBow5G1047 Salvia bowleyana HOM05D005078 ORTHO05D007574 1.3e-19 99.4 59 83.1
Sc14g0003200 Simmondsia chinensis HOM05D005078 ORTHO05D007574 1.3e-19 99.4 59 83.1
PGSC0003DMG400005500 Solanum tuberosum HOM05D005078 ORTHO05D007574 1.3e-19 99.4 59 81.4
MSTRG.16563 Avicennia marina HOM05D005078 ORTHO05D007574 2.1e-19 98.6 59 81.4
Sabra06G0199100 Salix brachista HOM05D005078 ORTHO05D007574 2.8e-19 98.2 59 81.4
Aa31LG8G6520 Aethionema arabicum HOM05D005078 ORTHO05D007574 3.6e-19 97.8 59 79.7
Solyc10g047050.2 Solanum lycopersicum HOM05D005078 ORTHO05D007574 3.6e-19 97.8 59 79.7
Sopen10g017000 Solanum pennellii HOM05D005078 ORTHO05D007574 3.6e-19 97.8 59 79.7
Thhalv10020106m.g Eutrema salsugineum HOM05D005078 ORTHO05D007574 4.8e-19 97.4 59 79.7
ATR0090G021 Amborella trichopoda HOM05D005078 ORTHO05D007574 6.2e-19 97.1 59 79.7
CAN.G1.26 Capsicum annuum HOM05D005078 ORTHO05D007574 6.2e-19 97.1 59 79.7
Haze_10783 Corylus avellana HOM05D005078 ORTHO05D007574 6.2e-19 97.1 67 77.6
TWI59G0763 Tripterygium wilfordii HOM05D005078 ORTHO05D007574 8.1e-19 96.7 59 81.4
Cpa.g.sc63.26 Carica papaya HOM05D005078 ORTHO05D007574 1.4e-18 95.9 59 78.0
THA.LOC104826527 Tarenaya hassleriana HOM05D005078 ORTHO05D007574 1.8e-18 95.5 59 76.3
AUR62027389 Chenopodium quinoa HOM05D005078 ORTHO05D007574 5.3e-18 94.0 59 79.7
AUR62031303 Chenopodium quinoa HOM05D005078 ORTHO05D007574 5.3e-18 94.0 59 79.7
HPP92_016129 Vanilla planifolia HOM05D005078 ORTHO05D007574 5.3e-18 94.0 59 78.0
Hund06705 Selenicereus undatus HOM05D005078 ORTHO05D007574 9.0e-18 93.2 59 78.0
EL10Ac8g19337 Beta vulgaris HOM05D005078 ORTHO05D007574 2.0e-17 92.0 59 78.0
SEGI_00685 Sequoiadendron giganteum HOM05D005078 ORTHO05D007574 1.7e-16 89.0 59 69.5
Ah.09g232120 Amaranthus hybridus HOM05D005078 ORTHO05D007574 2.2e-16 88.6 59 74.6
Mapoly0079s0059 Marchantia polymorpha HOM05D005078 ORTHO05D007574 4.9e-16 87.4 59 69.5
CBR_g24372 Chara braunii HOM05D005078 ORTHO05D007574 1.1e-15 86.3 59 64.4
Pp3c1_7590 Physcomitrium patens HOM05D005078 ORTHO05D007574 7.1e-15 83.6 59 66.1
Pp3c2_33000 Physcomitrium patens HOM05D005078 ORTHO05D007574 7.1e-15 83.6 59 67.8
QL09p047099 Quercus lobata HOM05D005078 ORTHO05D007574 7.1e-15 83.6 62 75.8
SMO169G0059 Selaginella moellendorffii HOM05D005078 ORTHO05D007574 7.1e-15 83.6 59 64.4
TPR.G8453 Trifolium pratense HOM05D005078 ORTHO05D007574 1.6e-14 82.4 69 66.7
Zm00001eb408290 Zea mays HOM05D005078 ORTHO05D007574 2.7e-14 81.6 56 67.9
Gohir.A03G171500 Gossypium hirsutum HOM05D005078 ORTHO05D007574 1.3e-11 72.8 38 89.5
MCO03G066 Micromonas commoda HOM05D005078 ORTHO05D007574 4.8e-11 70.9 56 53.6
Pp3c2_33410 Physcomitrium patens HOM05D005078 ORTHO05D007574 2.4e-10 68.6 56 57.1
Nitab4.5_0010375g0010 Nicotiana tabacum HOM05D005078 ORTHO05D007574 3.1e-10 68.2 38 78.9
PRCOL_00002637 Prasinoderma coloniale HOM05D005078 ORTHO05D007574 3.1e-10 68.2 59 47.5
Nitab4.5_0000078g0180 Nicotiana tabacum HOM05D005078 ORTHO05D007574 1.2e-09 66.2 38 78.9
FAN04G1076 Fragaria x ananassa HOM05D005078 ORTHO05D007574 1.1e-07 59.7 59 55.9


User provided reference genes

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