Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24224 Davidia involucrata HOM05D015193 ORTHO05D005682 7.6e-222 773.5 379 100.0
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 4.9e-144 515.0 414 64.7
Dinv24217 Davidia involucrata HOM05D003963 ORTHO05D004558 5.0e-104 382.1 230 80.0
CSS0005823 Camellia sinensis var. sinensis HOM05D015193 ORTHO05D005682 1.1e-42 178.3 409 33.7
CSS0007671 Camellia sinensis var. sinensis HOM05D015193 ORTHO05D005682 3.9e-32 143.3 305 35.1
CSS0024705 Camellia sinensis var. sinensis HOM05D015193 ORTHO05D005682 5.1e-24 116.3 304 31.9
CSS0014832 Camellia sinensis var. sinensis HOM05D015193 ORTHO05D005682 4.2e-18 96.7 256 29.7
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 8.7e-16 89.0 392 26.3
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 4.9e-11 73.2 211 28.4
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-10 72.0 255 30.6
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-10 72.0 255 30.6
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 1.9e-10 71.2 245 29.4
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 1.9e-10 71.2 208 26.4
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 1.9e-10 71.2 208 26.4
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-10 70.9 245 29.4
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.2e-10 70.1 255 30.6
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.3e-10 68.9 203 27.6
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 1.6e-09 68.2 203 27.1
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.5e-09 67.0 252 27.0
Lju1319C1T3 Lonicera japonica HOM05D028833 ORTHO05D012833 3.5e-09 67.0 158 29.7
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 4.6e-09 66.6 212 29.7
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.6e-09 66.6 208 28.8
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 6.0e-09 66.2 112 35.7
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-09 65.9 208 28.8
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-09 65.9 208 28.8
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-09 65.9 186 29.6
vmacro07839 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 1.0e-08 65.5 138 29.0
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 1.3e-08 65.1 208 28.4
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 1.3e-08 65.1 208 28.4
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.8e-08 64.7 273 29.7
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 1.8e-08 64.7 255 29.8
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-08 64.7 127 35.4
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.8e-08 64.7 337 24.3
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 2.3e-08 64.3 187 28.9
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-08 64.3 128 38.3
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-08 64.3 187 28.9
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-08 64.3 187 28.9
vmacro12005 Vaccinium macrocarpon HOM05D019272 ORTHO05D020252 2.3e-08 64.3 253 26.5
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.9e-08 63.5 201 31.3
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 3.9e-08 63.5 118 33.9
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.1e-08 63.2 203 29.1
Aqoxy2G03550 Aquilegia oxysepala HOM05D013671 ORTHO05D010877 6.7e-08 62.8 124 28.2
Cc06_g12930 Coffea canephora HOM05D015193 ORTHO05D005682 6.7e-08 62.8 200 29.5
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.7e-08 62.8 239 28.0
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 8.7e-08 62.4 203 29.1
CSS0027353 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 1.1e-07 62.0 132 31.8
Lj5A253T37 Lonicera japonica HOM05D012292 ORTHO05D012234 1.5e-07 61.6 266 23.7
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.5e-07 60.8 195 29.7
CSS0024213 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 5.6e-07 59.7 127 30.7
Lj5A265T30 Lonicera japonica HOM05D012292 ORTHO05D012234 7.4e-07 59.3 139 30.9
Lju3917C0T2 Lonicera japonica HOM05D012292 ORTHO05D012234 7.4e-07 59.3 147 29.9
CSS0012204 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 9.6e-07 58.9 127 30.7
COL.COLO4_09850 Corchorus olitorius HOM05D014846 ORTHO05D016249 9.6e-07 58.9 155 27.1
Lj5C264T6 Lonicera japonica HOM05D012292 ORTHO05D012234 9.6e-07 58.9 148 31.8
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.3e-06 58.5 218 24.3
QL12p011282 Quercus lobata HOM05D011274 ORTHO05D012136 1.3e-06 58.5 154 28.6
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-06 58.2 179 32.4
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-06 58.2 188 27.7
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 2.1e-06 57.8 167 29.3
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 2.1e-06 57.8 192 28.1
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 2.1e-06 57.8 178 31.5
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-06 57.8 140 32.9
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 2.8e-06 57.4 200 30.5
FvH4_7g27001 Fragaria vesca HOM05D010677 ORTHO05D012678 3.7e-06 57.0 213 25.4
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-06 57.0 170 28.2
Ah.03g147960 Amaranthus hybridus HOM05D037678 ORTHO05D012136 4.8e-06 56.6 151 28.5
Lj5P260T19 Lonicera japonica HOM05D012292 ORTHO05D012234 4.8e-06 56.6 149 32.9
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.2e-06 56.2 223 27.4
Lj5A250G20 Lonicera japonica HOM05D012292 ORTHO05D012234 8.1e-06 55.8 229 24.5
Lju3917C0T1 Lonicera japonica HOM05D012292 ORTHO05D012234 8.1e-06 55.8 137 29.9


User provided reference genes

Program Settings