Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 9.6e-195 683.3 349 100.0
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 8.5e-143 510.8 381 70.6
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 2.8e-138 495.7 334 77.8
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 1.1e-137 493.8 333 76.6
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 1.2e-136 490.3 295 83.7
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 5.9e-136 488.0 380 67.6
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 2.2e-135 486.1 382 67.5
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 3.8e-135 485.3 312 78.5
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 6.5e-135 484.6 398 64.8
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 2.1e-133 479.6 322 77.3
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 4.7e-133 478.4 311 80.1
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 3.0e-132 475.7 378 66.1
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 3.0e-132 475.7 308 78.6
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 4.0e-132 475.3 295 81.0
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 4.0e-132 475.3 298 79.5
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 6.8e-132 474.6 308 78.6
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 8.8e-132 474.2 314 75.2
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 8.8e-132 474.2 305 78.0
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 2.6e-131 472.6 366 67.5
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 4.4e-131 471.9 298 79.2
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 4.4e-131 471.9 298 79.2
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 7.5e-131 471.1 306 78.8
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 9.8e-131 470.7 333 70.3
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 9.8e-131 470.7 305 77.0
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 1.3e-130 470.3 298 78.2
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 1.7e-130 469.9 313 76.0
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 2.8e-130 469.2 387 64.6
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 6.3e-130 468.0 296 77.4
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 1.1e-129 467.2 378 66.1
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 1.4e-129 466.8 302 76.8
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 2.4e-129 466.1 368 66.8
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 3.1e-129 465.7 296 78.4
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 2.7e-128 462.6 331 71.9
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 7.7e-128 461.1 301 79.1
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 1.3e-127 460.3 300 80.0
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 1.7e-127 459.9 295 78.3
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 2.2e-127 459.5 372 65.9
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 2.2e-127 459.5 306 77.1
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 2.2e-127 459.5 306 78.1
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 2.9e-127 459.1 308 75.6
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 3.8e-127 458.8 300 77.7
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 6.5e-127 458.0 301 75.7
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 1.1e-126 457.2 303 76.6
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 1.9e-126 456.4 301 75.7
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 2.5e-126 456.1 381 63.8
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 2.5e-126 456.1 379 64.1
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 9.5e-126 454.1 296 76.7
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 1.2e-125 453.8 304 77.6
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 1.6e-125 453.4 296 77.0
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 2.8e-125 452.6 296 76.7
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 3.6e-125 452.2 306 72.5
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 4.7e-125 451.8 330 70.3
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 1.5e-123 446.8 297 76.1
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 3.4e-123 445.7 332 68.4
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 4.4e-123 445.3 347 67.1
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 2.8e-122 442.6 296 75.3
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 3.7e-122 442.2 378 63.5
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 6.3e-122 441.4 380 62.1
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 6.3e-122 441.4 309 72.2
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 2.4e-121 439.5 369 62.1
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 3.1e-121 439.1 340 65.9
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 4.1e-121 438.7 378 60.3
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 1.0e-119 434.1 299 71.2
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 3.8e-119 432.2 334 66.8
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 2.1e-117 426.4 309 69.3
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 2.8e-117 426.0 305 72.8
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 1.0e-116 424.1 305 72.8
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 1.8e-116 423.3 296 70.9
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 3.0e-116 422.5 306 70.6
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 8.9e-116 421.0 272 79.0
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 1.2e-115 420.6 308 68.5
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 1.5e-115 420.2 308 68.5
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 3.4e-115 419.1 309 71.5
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 3.7e-114 415.6 328 65.5
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 6.4e-114 414.8 296 70.9
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 3.2e-113 412.5 306 69.9
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 9.2e-113 411.0 308 68.5
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 2.7e-112 409.5 299 70.2
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 2.7e-112 409.5 279 75.6
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 4.6e-112 408.7 317 65.6
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 5.9e-112 408.3 300 68.7
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 2.3e-111 406.4 300 67.7
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 3.9e-111 405.6 297 69.7
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 3.9e-111 405.6 299 69.6
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 5.6e-110 401.7 297 69.4
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 5.6e-110 401.7 297 69.4
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 7.3e-110 401.4 277 72.9
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 7.5e-107 391.3 333 60.7
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 2.2e-106 389.8 276 71.4
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 9.2e-105 384.4 249 79.1
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 1.9e-102 376.7 353 61.2
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 6.8e-100 368.2 296 61.5
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.5e-99 367.1 303 62.0
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 2.9e-98 362.8 314 59.2
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 9.2e-97 357.8 362 55.8
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 7.8e-96 354.8 326 59.2
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 7.8e-96 354.8 326 58.0
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 3.9e-95 352.4 303 60.1
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 4.7e-93 345.5 296 62.2
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 4.4e-91 339.0 279 63.8
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 7.1e-89 331.6 259 68.3
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 2.1e-88 330.1 230 75.7
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 2.6e-83 313.2 188 83.5
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 1.9e-78 297.0 212 70.3
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 4.3e-78 295.8 343 52.2
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 8.1e-77 291.6 221 67.0
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 2.7e-72 276.6 324 48.5
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 4.6e-72 275.8 320 50.3
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 7.1e-65 251.9 299 47.2
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 8.7e-63 245.0 276 48.2
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 1.3e-61 241.1 298 47.0
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 1.0e-58 231.5 166 68.7
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 1.8e-52 210.7 270 48.5
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 1.5e-46 191.0 341 37.2
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 2.5e-41 173.7 119 69.7
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 4.2e-33 146.4 104 70.2
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 4.2e-33 146.4 104 70.2
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 3.1e-28 130.2 87 71.3
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 5.3e-28 129.4 107 62.6
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 3.2e-25 120.2 90 70.0
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 3.2e-25 120.2 90 70.0
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 9.4e-25 118.6 90 68.9
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 2.8e-21 107.1 83 61.4
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 1.2e-16 91.7 87 59.8
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 3.4e-14 83.6 93 54.8
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 2.8e-13 80.5 65 61.5
Potri.001G311400 Populus trichocarpa HOM05D006342 ORTHO05D332779 3.4e-06 57.0 93 40.9


User provided reference genes

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