Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 1.5e-214 749.2 361 100.0
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.8e-204 715.7 361 93.9
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 1.2e-203 713.0 361 94.2
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 3.5e-200 701.4 361 91.7
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 6.0e-200 700.7 361 91.4
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.7e-199 699.1 361 91.1
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 5.1e-199 697.6 359 91.6
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 4.3e-198 694.5 357 91.6
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 4.3e-198 694.5 361 90.6
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.6e-197 692.6 361 90.6
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 2.8e-197 691.8 361 89.8
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 3.6e-197 691.4 361 90.9
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 8.1e-197 690.3 361 90.0
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 8.1e-197 690.3 361 90.0
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 1.4e-196 689.5 359 90.5
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 1.4e-196 689.5 361 89.2
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 2.4e-196 688.7 361 91.1
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 4.0e-196 688.0 361 88.4
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 9.0e-196 686.8 361 89.2
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 1.2e-195 686.4 361 88.9
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 2.0e-195 685.6 359 89.7
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 3.8e-194 681.4 359 89.4
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 3.8e-194 681.4 371 88.7
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 8.4e-194 680.2 361 87.0
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 5.4e-193 677.6 361 89.2
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.2e-192 676.4 361 87.0
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 2.1e-192 675.6 360 89.7
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 2.1e-192 675.6 361 86.4
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 3.5e-192 674.9 361 87.3
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 3.5e-192 674.9 361 87.3
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 4.6e-192 674.5 361 87.5
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 6.0e-192 674.1 359 88.3
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 7.9e-192 673.7 362 87.8
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 1.0e-191 673.3 361 86.7
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 1.3e-191 672.9 358 88.0
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 2.3e-191 672.2 361 87.0
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 3.9e-191 671.4 361 86.7
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 5.1e-191 671.0 361 87.3
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 5.1e-191 671.0 361 85.3
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 8.7e-191 670.2 358 87.4
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 1.9e-190 669.1 358 87.2
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 7.3e-190 667.2 361 85.6
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 2.8e-189 665.2 359 86.4
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 2.8e-189 665.2 361 86.4
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 8.1e-189 663.7 361 87.0
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 1.1e-188 663.3 358 85.5
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 4.0e-188 661.4 361 85.9
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 9.0e-188 660.2 361 86.4
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 1.2e-187 659.8 361 86.4
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 2.0e-187 659.1 396 80.1
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 2.0e-187 659.1 361 84.5
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 2.6e-187 658.7 357 86.6
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 5.8e-187 657.5 387 81.4
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 5.8e-187 657.5 361 84.8
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 7.6e-187 657.1 361 85.3
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 1.7e-186 656.0 360 85.8
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.7e-186 656.0 360 85.8
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 3.8e-186 654.8 360 85.6
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 3.8e-186 654.8 417 77.0
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 3.8e-186 654.8 361 85.0
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 4.9e-186 654.4 360 85.8
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 8.4e-186 653.7 361 84.8
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.1e-185 653.3 360 85.6
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 5.4e-185 651.0 360 85.3
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 2.7e-184 648.7 339 89.1
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 1.3e-183 646.4 360 83.3
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 3.9e-183 644.8 401 77.6
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 1.1e-182 643.3 361 83.1
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 7.4e-182 640.6 428 73.8
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 6.2e-181 637.5 359 82.5
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 8.1e-181 637.1 359 82.2
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 1.1e-180 636.7 359 82.7
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 6.9e-180 634.0 357 82.6
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 1.2e-179 633.3 359 81.6
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 5.8e-179 630.9 360 83.3
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 1.3e-178 629.8 359 81.6
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 1.3e-178 629.8 359 81.6
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 1.3e-178 629.8 359 81.6
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 1.7e-178 629.4 359 81.3
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 2.9e-178 628.6 359 81.3
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 4.9e-178 627.9 358 81.8
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 8.4e-178 627.1 357 82.1
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 1.9e-177 625.9 357 82.6
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 2.5e-177 625.5 359 80.8
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 1.0e-175 620.2 387 75.5
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 7.4e-174 614.0 359 81.9
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 2.8e-173 612.1 359 79.9
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 3.7e-173 611.7 359 79.9
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 1.1e-172 610.1 359 79.7
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 1.1e-172 610.1 361 79.5
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 3.1e-172 608.6 361 79.2
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 4.1e-172 608.2 314 91.4
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 1.0e-170 603.6 366 75.1
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 8.4e-170 600.5 366 75.1
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 6.3e-165 584.3 361 77.8
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 3.1e-164 582.0 357 75.6
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 1.3e-162 576.6 302 91.1
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 1.5e-158 563.1 314 85.4
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 2.5e-158 562.4 336 78.3
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 1.0e-154 550.4 306 85.3
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 6.5e-154 547.7 403 69.0
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 1.3e-146 523.5 352 73.9
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 1.3e-146 523.5 357 70.6
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 6.1e-144 514.6 357 68.3
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 5.7e-142 508.1 357 66.7
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 1.4e-140 503.4 358 68.2
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 4.4e-134 481.9 365 67.7
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 1.2e-131 473.8 361 67.0
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 1.6e-131 473.4 252 89.7
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 3.2e-129 465.7 368 61.7
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 8.0e-128 461.1 241 91.7
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 2.9e-117 426.0 211 94.8
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 1.9e-113 413.3 239 82.4
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 2.4e-100 369.8 205 84.9
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 3.5e-75 286.2 180 78.3
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 9.9e-70 268.1 152 78.3
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.8e-63 247.3 154 74.0
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 7.6e-62 241.9 119 90.8
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 7.4e-57 225.3 126 81.0
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 6.3e-48 195.7 207 52.2
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 4.5e-46 189.5 326 37.1
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 4.5e-38 162.9 98 80.6
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 3.0e-34 150.2 117 66.7
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 3.0e-26 123.6 59 91.5
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 1.5e-25 121.3 111 59.5
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 1.6e-19 101.3 79 65.8
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 1.6e-14 84.7 51 68.6
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 1.6e-14 84.7 37 97.3
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 5.0e-13 79.7 130 42.3
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 1.2e-09 68.6 247 27.9


User provided reference genes

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