Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 7.0e-185 650.6 353 100.0
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 1.9e-158 562.8 353 81.6
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 4.3e-158 561.6 353 79.9
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 9.5e-158 560.5 353 83.3
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 8.0e-157 557.4 353 79.9
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 5.2e-156 554.7 353 83.9
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 1.5e-155 553.1 353 77.1
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 6.4e-154 547.7 353 75.1
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 1.8e-153 546.2 353 74.8
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.6e-152 543.1 353 77.1
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.7e-152 542.3 353 74.2
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 5.9e-152 541.2 353 76.5
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 1.7e-151 539.7 353 73.7
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 2.3e-151 539.3 354 81.1
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 3.9e-151 538.5 353 81.3
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 5.0e-151 538.1 359 76.3
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 8.6e-151 537.3 353 73.4
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 1.5e-150 536.6 358 79.3
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 1.5e-150 536.6 353 75.9
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 2.5e-150 535.8 353 73.4
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.5e-150 535.8 353 72.5
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 3.3e-150 535.4 347 79.3
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 3.3e-150 535.4 353 73.1
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 4.3e-150 535.0 353 77.6
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 7.3e-150 534.3 353 73.9
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 7.3e-150 534.3 353 72.2
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 7.3e-150 534.3 353 72.5
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 9.5e-150 533.9 354 78.2
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 4.7e-149 531.6 355 73.5
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 4.7e-149 531.6 353 70.3
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 6.2e-149 531.2 353 72.2
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 6.2e-149 531.2 353 79.0
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 8.0e-149 530.8 365 80.3
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 1.0e-148 530.4 353 72.8
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 1.4e-148 530.0 356 76.1
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 1.4e-148 530.0 353 72.2
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.8e-148 529.6 353 73.4
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.8e-148 529.6 353 72.8
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 2.3e-148 529.3 353 78.2
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 5.2e-148 528.1 353 72.0
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 6.8e-148 527.7 353 71.1
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 6.8e-148 527.7 353 76.5
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 6.8e-148 527.7 353 71.1
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.5e-147 526.6 353 76.2
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.0e-147 526.2 353 73.7
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 2.0e-147 526.2 353 69.1
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 3.4e-147 525.4 361 71.5
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 3.4e-147 525.4 354 71.2
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 5.8e-147 524.6 355 74.4
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 9.8e-147 523.9 353 74.8
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 1.3e-146 523.5 355 75.8
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.3e-146 523.5 355 71.0
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 1.7e-146 523.1 353 69.1
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.7e-146 521.9 355 70.7
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 8.3e-146 520.8 353 70.5
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 1.4e-145 520.0 353 69.1
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 1.4e-145 520.0 353 74.8
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 4.1e-145 518.5 360 68.6
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 7.0e-145 517.7 355 69.3
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 7.0e-145 517.7 355 71.3
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 1.2e-144 516.9 353 70.5
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.2e-144 516.9 355 77.2
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 1.6e-144 516.5 353 70.5
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 2.7e-144 515.8 353 68.3
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 3.5e-144 515.4 360 74.4
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 3.5e-144 515.4 355 71.8
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 4.6e-144 515.0 353 69.4
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 3.0e-143 512.3 357 76.8
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 3.9e-143 511.9 355 76.1
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 6.6e-143 511.1 353 68.6
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 8.6e-143 510.8 355 76.1
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 1.1e-142 510.4 353 68.8
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 1.1e-142 510.4 361 67.0
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.1e-142 510.4 353 67.7
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 1.5e-142 510.0 353 68.3
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 1.9e-142 509.6 360 66.9
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 1.9e-142 509.6 356 68.8
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 2.5e-142 509.2 359 73.3
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 3.3e-142 508.8 353 68.0
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 3.3e-142 508.8 360 68.6
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 5.6e-142 508.1 353 68.8
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.6e-142 508.1 359 66.9
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 5.6e-142 508.1 357 75.4
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 9.5e-142 507.3 361 66.5
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 1.2e-141 506.9 354 68.1
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 1.6e-141 506.5 360 74.7
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 1.6e-141 506.5 357 73.1
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 1.6e-141 506.5 361 74.2
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 2.1e-141 506.1 353 67.4
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 3.6e-141 505.4 360 74.7
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 6.2e-141 504.6 355 66.2
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 8.1e-141 504.2 355 67.9
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 1.4e-140 503.4 355 67.9
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 4.0e-140 501.9 353 68.0
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 4.0e-140 501.9 358 73.2
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 8.9e-140 500.7 353 74.2
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 1.5e-139 500.0 364 68.4
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 2.0e-139 499.6 353 69.4
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 2.0e-139 499.6 353 67.1
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 2.6e-139 499.2 363 72.7
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 9.8e-139 497.3 355 67.6
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 1.3e-138 496.9 358 74.3
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 1.7e-138 496.5 358 67.3
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 6.4e-138 494.6 364 65.9
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.4e-137 492.7 353 66.9
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 4.6e-136 488.4 353 73.4
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 7.8e-136 487.6 361 65.1
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.1e-134 483.8 354 64.7
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 1.5e-134 483.4 398 60.6
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 9.5e-134 480.7 359 70.8
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.2e-133 480.3 348 66.4
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 1.6e-133 479.9 354 67.8
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.1e-132 477.2 355 65.4
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.0e-131 473.0 353 64.6
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 2.0e-131 473.0 354 63.8
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 4.4e-131 471.9 353 66.6
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 5.8e-131 471.5 334 66.2
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 1.1e-129 467.2 353 69.4
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 1.1e-129 467.2 353 66.6
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 1.4e-129 466.8 353 64.0
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 1.9e-129 466.5 354 62.7
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 1.6e-128 463.4 356 62.1
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 7.8e-128 461.1 353 61.2
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 3.0e-127 459.1 353 60.6
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 2.5e-126 456.1 355 63.4
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 6.2e-125 451.4 353 60.6
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 5.2e-124 448.4 353 60.9
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 2.0e-123 446.4 338 63.6
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.6e-123 446.0 305 78.4
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 1.1e-121 440.7 353 60.1
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 7.3e-118 427.9 290 72.1
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.3e-114 417.2 354 64.1
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.8e-108 396.7 276 76.8
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 4.9e-106 388.7 296 67.2
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 1.5e-102 377.1 355 54.9
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 1.6e-101 373.6 296 61.5
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 2.4e-100 369.8 327 59.6
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 8.2e-77 291.6 353 46.2
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 5.0e-74 282.3 272 56.2
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.9e-73 280.4 213 70.0
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 5.0e-66 255.8 351 40.5
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 1.9e-65 253.8 244 57.0
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.7e-64 250.0 156 73.7
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 2.8e-61 240.0 356 44.7
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 8.5e-58 228.4 115 93.9
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.6e-56 224.2 175 67.4
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 7.0e-52 208.8 126 77.8
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.6e-51 207.6 123 74.0
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 1.9e-33 147.5 133 71.4
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 5.6e-33 146.0 190 42.1
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.8e-32 143.7 85 71.8
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.8e-31 141.0 85 70.6
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.0e-31 139.8 85 69.4
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 1.2e-30 138.3 138 50.7
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 9.8e-30 135.2 85 67.1
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 1.1e-28 131.7 187 40.1
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.7e-27 127.1 106 61.3
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 1.4e-23 114.8 63 85.7
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 2.3e-23 114.0 59 89.8
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 2.3e-23 114.0 59 89.8
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 1.3e-21 108.2 192 37.5
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 7.1e-20 102.4 136 40.4
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.2e-19 101.7 60 80.0
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.6e-19 101.3 58 79.3
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 3.9e-18 96.7 75 56.0
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 2.5e-17 94.0 55 80.0
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 1.2e-16 91.7 76 60.5
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.1e-15 87.0 59 66.1
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.3e-13 81.6 80 51.2
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 1.7e-13 81.3 49 69.4
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 2.9e-13 80.5 149 28.2
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.2e-12 77.0 37 78.4
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 7.1e-12 75.9 75 48.0
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 4.6e-11 73.2 64 48.4
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.7e-10 71.2 83 42.2
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 5.1e-10 69.7 50 64.0
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 4.3e-09 66.6 87 43.7
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 1.6e-08 64.7 53 54.7
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 1.1e-07 62.0 158 25.9
MCO13G471 Micromonas commoda HOM05D003641 ORTHO05D049026 5.8e-06 56.2 174 27.0


User provided reference genes

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