Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24050 Davidia involucrata HOM05D003047 ORTHO05D000627 1.4e-40 169.1 83 100.0
Hma1.2p1_0124F.1_g058280 Hydrangea macrophylla HOM05D003047 ORTHO05D000627 2.8e-12 75.1 80 58.8
CiPaw.09G027700 Carya illinoinensis HOM05D003047 ORTHO05D000627 3.1e-11 71.6 77 53.2
Manes.09G038600 Manihot esculenta HOM05D003047 ORTHO05D000627 5.4e-11 70.9 57 66.7
Actinidia17286 Actinidia chinensis HOM05D003047 ORTHO05D000627 1.2e-10 69.7 72 54.2
CSS0020370 Camellia sinensis var. sinensis HOM05D003047 ORTHO05D000627 1.2e-10 69.7 53 69.8
Hma1.2p1_0116F.1_g056140 Hydrangea macrophylla HOM05D003047 ORTHO05D000627 2.9e-09 65.1 79 50.6
Atru.chr8.1166 Acer truncatum HOM05D003047 ORTHO05D000627 6.5e-09 63.9 60 61.7
Cfa020137 Carpinus fangiana HOM05D003047 ORTHO05D000627 8.5e-09 63.5 82 51.2
Manes.08G041900 Manihot esculenta HOM05D003047 ORTHO05D000627 8.5e-09 63.5 57 59.6
CiPaw.10G024800 Carya illinoinensis HOM05D003047 ORTHO05D000627 1.1e-08 63.2 84 48.8
TWI74G1081 Tripterygium wilfordii HOM05D003047 ORTHO05D000627 1.5e-08 62.8 61 57.4
TAR623G1143 Trochodendron aralioides HOM05D003047 ORTHO05D000627 1.5e-08 62.8 79 53.2
Nn7g35949 Nelumbo nucifera HOM05D003047 ORTHO05D000627 1.9e-08 62.4 82 48.8
Potri.006G195100 Populus trichocarpa HOM05D003047 ORTHO05D000627 1.9e-08 62.4 59 66.1
Sabra06G0149800 Salix brachista HOM05D003047 ORTHO05D000627 3.2e-08 61.6 57 63.2
TAR633G1856 Trochodendron aralioides HOM05D003047 ORTHO05D000627 3.2e-08 61.6 71 53.5
QL07p024739 Quercus lobata HOM05D003047 ORTHO05D000627 5.5e-08 60.8 80 52.5
TAR369G0861 Trochodendron aralioides HOM05D003047 ORTHO05D000627 5.5e-08 60.8 83 48.2
TAR369G1005 Trochodendron aralioides HOM05D003047 ORTHO05D000627 5.5e-08 60.8 83 48.2
Actinidia38595 Actinidia chinensis HOM05D003047 ORTHO05D000627 7.2e-08 60.5 64 56.2
Cc06_g15570 Coffea canephora HOM05D003047 ORTHO05D000627 7.2e-08 60.5 84 51.2
Haze_20032 Corylus avellana HOM05D003047 ORTHO05D000627 7.2e-08 60.5 83 49.4
Potri.016G060600 Populus trichocarpa HOM05D003047 ORTHO05D000627 1.6e-07 59.3 61 59.0
Prupe.7G082800 Prunus persica HOM05D003047 ORTHO05D000627 1.6e-07 59.3 63 54.0
PGR004G2322 Punica granatum HOM05D003047 ORTHO05D000627 2.7e-07 58.5 66 57.6
Ciclev10012347m.g Citrus clementina HOM05D003047 ORTHO05D000627 6.1e-07 57.4 68 50.0
RcHm_v2.0_Chr3g0479101 Rosa chinensis HOM05D003047 ORTHO05D000627 6.1e-07 57.4 85 48.2
MD12G1054000 Malus domestica HOM05D003047 ORTHO05D000627 8.0e-07 57.0 94 44.7
Nn2g15752 Nelumbo nucifera HOM05D003047 ORTHO05D000627 1.8e-06 55.8 71 53.5
COL.COLO4_29372 Corchorus olitorius HOM05D003047 ORTHO05D000627 2.3e-06 55.5 90 46.7
FAN05G0236 Fragaria x ananassa HOM05D003047 ORTHO05D000627 2.3e-06 55.5 84 47.6
Nitab4.5_0007813g0010 Nicotiana tabacum HOM05D003047 ORTHO05D000627 2.3e-06 55.5 89 44.9
Thecc.05G176200 Theobroma cacao HOM05D003047 ORTHO05D000627 2.3e-06 55.5 80 47.5
Lju124C22T4 Lonicera japonica HOM05D003047 ORTHO05D000627 4.0e-06 54.7 41 65.9
MD14G1052700 Malus domestica HOM05D003047 ORTHO05D000627 4.0e-06 54.7 67 53.7
Sabra16G0063500 Salix brachista HOM05D003047 ORTHO05D000627 4.0e-06 54.7 73 50.7
FAN14G4307 Fragaria x ananassa HOM05D003047 ORTHO05D000627 5.2e-06 54.3 85 45.9
Glyma.19G150800 Glycine max HOM05D003047 ORTHO05D000627 5.2e-06 54.3 75 44.0
Oeu024497.1 Olea europaea HOM05D003047 ORTHO05D000627 5.2e-06 54.3 65 44.6
FAN09G1562 Fragaria x ananassa HOM05D003047 ORTHO05D000627 6.8e-06 53.9 84 46.4
Oeu057585.1 Olea europaea HOM05D003047 ORTHO05D000627 8.8e-06 53.5 82 51.2
Psat6g118400 Pisum sativum HOM05D003047 ORTHO05D000627 8.8e-06 53.5 69 52.2
TWI53G1488 Tripterygium wilfordii HOM05D003047 ORTHO05D000627 8.8e-06 53.5 94 39.4


User provided reference genes

Program Settings