Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 2.8e-83 312.0 168 100.0
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 1.7e-64 249.6 192 76.6
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.9e-60 236.1 192 71.4
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 5.7e-60 234.6 192 69.8
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 1.3e-59 233.4 196 69.9
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 1.6e-59 233.0 190 73.7
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 2.2e-59 232.6 196 69.4
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 3.7e-59 231.9 195 69.2
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 4.8e-59 231.5 196 69.4
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 4.8e-59 231.5 196 69.4
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 6.3e-59 231.1 195 70.8
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 1.1e-58 230.3 195 71.3
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 1.1e-58 230.3 195 71.3
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 1.1e-58 230.3 195 68.7
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 1.8e-58 229.6 195 69.7
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 1.8e-58 229.6 196 68.9
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 2.4e-58 229.2 197 69.0
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 2.4e-58 229.2 197 69.5
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 2.4e-58 229.2 195 69.2
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 4.1e-58 228.4 196 69.4
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 6.9e-58 227.6 195 68.2
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 6.9e-58 227.6 195 68.2
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 6.9e-58 227.6 195 68.7
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 9.0e-58 227.3 197 69.0
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 9.0e-58 227.3 197 69.5
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 1.2e-57 226.9 197 68.5
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 1.2e-57 226.9 195 69.2
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 2.0e-57 226.1 198 68.2
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 2.0e-57 226.1 195 69.2
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 2.0e-57 226.1 197 68.5
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 2.0e-57 226.1 191 69.1
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 2.0e-57 226.1 195 69.2
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 2.0e-57 226.1 195 69.2
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 2.6e-57 225.7 195 67.7
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 3.4e-57 225.3 197 68.5
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 4.5e-57 224.9 195 68.7
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 4.5e-57 224.9 195 67.7
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 5.9e-57 224.6 197 68.0
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 5.9e-57 224.6 197 68.5
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 1.3e-56 223.4 195 67.2
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 2.2e-56 222.6 193 66.8
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 2.2e-56 222.6 197 68.0
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 2.9e-56 222.2 195 67.2
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 2.9e-56 222.2 195 67.7
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 5.0e-56 221.5 195 68.7
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 1.9e-55 219.5 196 67.9
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 2.5e-55 219.2 192 69.3
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 3.2e-55 218.8 195 65.6
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 4.2e-55 218.4 189 68.3
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 5.5e-55 218.0 197 67.5
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 5.5e-55 218.0 190 67.9
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 5.5e-55 218.0 195 67.7
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 7.2e-55 217.6 195 68.2
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 9.4e-55 217.2 195 67.2
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 9.4e-55 217.2 192 67.7
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 1.2e-54 216.9 195 65.1
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 1.2e-54 216.9 195 65.1
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 1.2e-54 216.9 195 65.1
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 1.6e-54 216.5 189 67.7
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 1.6e-54 216.5 189 67.7
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 2.1e-54 216.1 189 67.7
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 2.7e-54 215.7 189 67.2
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 4.6e-54 214.9 189 67.2
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 6.1e-54 214.5 189 67.2
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 7.9e-54 214.2 189 67.2
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 7.9e-54 214.2 204 63.7
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 1.0e-53 213.8 195 66.7
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 1.8e-53 213.0 189 66.7
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 1.8e-53 213.0 195 67.2
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 3.9e-53 211.8 195 65.1
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 5.1e-53 211.5 189 66.1
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 6.7e-53 211.1 189 66.1
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 6.7e-53 211.1 195 65.6
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 2.0e-52 209.5 194 64.4
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 4.3e-52 208.4 192 65.1
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 1.7e-51 206.5 192 63.5
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 6.3e-51 204.5 195 63.6
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 8.2e-51 204.1 180 67.8
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 1.1e-50 203.8 191 64.9
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 2.4e-50 202.6 192 63.0
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 4.1e-50 201.8 194 63.9
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 6.9e-50 201.1 196 62.8
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 6.9e-50 201.1 195 64.1
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 9.1e-50 200.7 189 65.1
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 1.5e-49 199.9 191 63.9
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 7.7e-49 197.6 195 63.1
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 7.7e-49 197.6 195 63.1
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.0e-48 197.2 192 62.0
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 1.7e-48 196.4 192 62.0
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 1.7e-48 196.4 195 62.1
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 7.2e-47 191.0 197 61.9
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 4.7e-46 188.3 195 61.5
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 4.7e-46 188.3 195 61.0
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 8.8e-45 184.1 127 83.5
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 2.6e-44 182.6 190 62.6
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 2.6e-44 182.6 190 61.6
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 2.6e-44 182.6 197 56.9
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 3.3e-44 182.2 174 65.5
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 7.4e-44 181.0 184 59.8
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 2.2e-43 179.5 195 59.5
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 1.8e-42 176.4 185 57.8
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 4.1e-42 175.3 189 58.2
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 2.6e-41 172.6 185 57.3
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 3.5e-41 172.2 183 56.3
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 6.1e-38 161.4 190 52.6
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 6.7e-37 157.9 195 51.3
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 6.7e-37 157.9 197 50.3
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 2.4e-34 149.4 205 47.8
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 2.4e-34 149.4 186 52.2
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 9.1e-34 147.5 194 51.5
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 9.1e-34 147.5 136 66.9
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 6.5e-32 141.4 185 45.4
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 6.1e-30 134.8 186 50.5
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 1.0e-29 134.0 137 62.0
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 4.0e-29 132.1 191 49.7
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 1.2e-28 130.6 137 60.6
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 1.5e-23 113.6 167 49.1
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 9.8e-20 100.9 88 67.0
Glyma.07G000600 Glycine max HOM05D005910 ORTHO05D007088 1.4e-18 97.1 68 82.4
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 1.4e-18 97.1 68 82.4
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 1.7e-16 90.1 64 73.4
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 6.6e-16 88.2 68 76.5
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 1.5e-15 87.0 76 65.8
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 4.7e-14 82.0 63 71.4
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 6.1e-14 81.6 61 73.8
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 4.0e-13 79.0 101 50.5
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 2.6e-12 76.3 114 38.6
AUR62043130 Chenopodium quinoa HOM05D005910 ORTHO05D007088 5.7e-12 75.1 59 71.2
SGA_v2.0_scaffold131G34402 Striga asiatica HOM05D005910 ORTHO05D007088 9.5e-07 57.8 54 68.5
SGA_v2.0_scaffold472G52090 Striga asiatica HOM05D005910 ORTHO05D007088 2.8e-06 56.2 54 64.8


User provided reference genes

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