Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 0.0e+00 1447.2 883 100.0
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 7.5e-212 741.5 996 48.2
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.1e-207 727.6 1031 46.9
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.6e-201 707.2 1055 47.0
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 9.9e-172 608.2 613 56.6
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 3.8e-171 606.3 1023 40.7
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 5.5e-154 549.3 1134 42.4
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 2.2e-142 510.8 1070 34.8
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 8.2e-142 508.8 1087 42.1
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 5.3e-141 506.1 1016 37.2
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 5.9e-140 502.7 1070 34.4
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 1.4e-138 498.0 1011 38.7
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 5.5e-138 496.1 634 46.4
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 1.8e-136 491.1 1055 34.3
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 9.1e-133 478.8 1023 34.8
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 3.8e-131 473.4 1015 35.0
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 5.0e-131 473.0 1051 33.1
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 6.5e-131 472.6 986 38.1
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 3.6e-129 466.8 1041 36.6
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 5.1e-128 463.0 1003 34.8
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 1.5e-127 461.5 1048 36.5
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 2.0e-127 461.1 1047 36.6
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 2.9e-123 447.2 1091 39.4
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 2.1e-121 441.0 650 43.5
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 1.4e-120 438.3 1067 34.4
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 2.6e-119 434.1 999 33.3
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 4.4e-119 433.3 972 36.5
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 2.2e-118 431.0 993 33.4
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.2e-116 425.2 1095 31.4
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 1.2e-116 425.2 1112 30.8
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.6e-116 424.9 1000 33.8
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 1.0e-115 422.2 1114 31.1
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 1.3e-115 421.8 1111 30.9
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 3.8e-115 420.2 633 41.2
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 1.5e-114 418.3 1076 32.6
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 6.1e-113 412.9 1053 35.6
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.8e-112 411.4 1027 33.5
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 7.7e-108 396.0 609 41.9
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 1.1e-106 392.1 1021 35.7
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 1.9e-106 391.3 992 32.2
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 2.5e-106 391.0 728 36.5
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 4.2e-106 390.2 1030 34.7
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 2.3e-104 384.4 838 34.7
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.2e-103 382.1 998 31.9
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 4.4e-103 380.2 981 32.1
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 4.9e-102 376.7 994 31.6
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.8e-101 374.8 1011 31.8
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 2.1e-97 361.3 579 40.6
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 4.7e-97 360.1 974 31.5
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 1.2e-95 355.5 599 38.7
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 4.4e-95 353.6 540 40.6
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.3e-94 352.1 1002 29.7
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 3.2e-93 347.4 945 32.4
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 7.0e-93 346.3 484 42.1
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 2.7e-92 344.4 541 40.3
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 5.9e-92 343.2 993 30.6
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 7.8e-92 342.8 957 31.1
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 2.3e-91 341.3 596 37.9
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 6.6e-91 339.7 629 35.8
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 6.6e-91 339.7 955 30.6
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 6.6e-91 339.7 952 31.5
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 4.3e-90 337.0 987 32.1
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 5.6e-90 336.7 861 32.3
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 2.8e-89 334.3 616 35.9
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 3.6e-89 334.0 450 44.7
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 1.8e-88 331.6 1009 30.3
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 8.9e-88 329.3 987 30.9
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 8.9e-88 329.3 956 29.8
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 3.4e-87 327.4 998 30.1
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 3.4e-87 327.4 470 41.1
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 3.7e-86 323.9 934 31.0
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 4.9e-86 323.6 947 30.5
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 1.4e-85 322.0 650 35.7
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 1.6e-84 318.5 1068 30.5
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 4.3e-82 310.5 552 37.3
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 1.1e-80 305.8 540 37.8
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.8e-80 305.1 963 28.3
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 8.9e-80 302.8 542 36.7
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 3.4e-79 300.8 519 39.3
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 9.8e-79 299.3 943 30.3
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 9.8e-79 299.3 614 34.7
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.4e-77 295.4 976 28.4
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 7.8e-76 289.7 540 35.7
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 2.6e-71 274.6 317 45.7
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 1.3e-70 272.3 317 45.1
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 1.5e-66 258.8 317 45.4
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 3.3e-66 257.7 314 46.8
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 7.3e-66 256.5 319 45.8
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 2.1e-65 255.0 314 47.1
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 6.2e-65 253.4 316 46.2
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 1.3e-62 245.7 327 44.0
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 4.9e-62 243.8 320 42.5
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 1.1e-61 242.7 324 44.8
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 1.4e-61 242.3 313 43.8
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 5.4e-61 240.4 314 43.3
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 1.6e-60 238.8 855 27.8
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 2.3e-59 235.0 182 58.8
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 2.1e-57 228.4 866 27.4
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 1.4e-56 225.7 362 37.8
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 5.8e-47 193.7 176 52.3
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 6.4e-46 190.3 313 34.2
Lj9A29T9 Lonicera japonica HOM05D006048 ORTHO05D007642 1.2e-44 186.0 302 42.4
Lj9A18T10 Lonicera japonica HOM05D006048 ORTHO05D007642 1.6e-44 185.7 800 41.6
Manes.08G121600 Manihot esculenta HOM05D006048 ORTHO05D007642 4.0e-40 171.0 701 28.8
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 3.4e-39 167.9 545 27.3
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 4.5e-39 167.5 838 27.4
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 4.2e-37 161.0 366 30.3
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 1.2e-36 159.5 356 29.8
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 2.1e-33 148.7 224 39.3
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 2.1e-28 132.1 478 25.7
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 1.0e-27 129.8 415 24.3
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 1.1e-26 126.3 90 65.6
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 1.8e-24 119.0 163 46.0
Actinidia01443 Actinidia chinensis HOM05D006048 ORTHO05D007642 5.9e-23 114.0 91 67.0
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 7.2e-21 107.1 330 29.1
Atru.chr2.430 Acer truncatum HOM05D006048 ORTHO05D007642 1.4e-16 92.8 141 44.7
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 5.0e-14 84.3 183 30.1
CDE05G3494 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 2.8e-09 68.6 188 33.0
Atru.chr2.431 Acer truncatum HOM05D006048 ORTHO05D007642 1.2e-07 63.2 197 31.5


User provided reference genes

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