Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23919 Davidia involucrata HOM05D005284 ORTHO05D006609 2.1e-82 308.9 146 100.0
Dinv04290 Davidia involucrata HOM05D005284 ORTHO05D006609 5.5e-27 124.8 72 79.2
Dinv04294 Davidia involucrata HOM05D005284 ORTHO05D006609 5.5e-27 124.8 72 79.2
Actinidia29265 Actinidia chinensis HOM05D005284 ORTHO05D006609 2.6e-24 115.9 61 83.6
CANSAT78G1346 Cannabis sativa HOM05D005284 ORTHO05D006609 3.3e-24 115.5 61 83.6
HanXRQChr12g0359761 Helianthus annuus HOM05D005284 ORTHO05D006609 3.3e-24 115.5 61 80.3
Peaxi162Scf00155g00513 Petunia axillaris HOM05D005284 ORTHO05D006609 3.3e-24 115.5 72 73.6
Rhsim13G0125000 Rhododendron simsii HOM05D005284 ORTHO05D006609 3.3e-24 115.5 61 83.6
vmacro03466 Vaccinium macrocarpon HOM05D005284 ORTHO05D006609 3.3e-24 115.5 61 82.0
COL.COLO4_26880 Corchorus olitorius HOM05D005284 ORTHO05D006609 4.4e-24 115.2 61 82.0
Sopen02g006280 Solanum pennellii HOM05D005284 ORTHO05D006609 5.7e-24 114.8 137 45.3
Thecc.06G009000 Theobroma cacao HOM05D005284 ORTHO05D006609 7.4e-24 114.4 61 80.3
Manes.14G126000 Manihot esculenta HOM05D005284 ORTHO05D006609 1.3e-23 113.6 61 82.0
Lsat_1_v5_gn_5_75320 Lactuca sativa HOM05D005284 ORTHO05D006609 1.7e-23 113.2 76 69.7
Nitab4.5_0000100g0010 Nicotiana tabacum HOM05D005284 ORTHO05D006609 1.7e-23 113.2 129 47.3
TWI38G1381 Tripterygium wilfordii HOM05D005284 ORTHO05D006609 1.7e-23 113.2 61 82.0
DCAR_000834 Daucus carota HOM05D005284 ORTHO05D006609 2.2e-23 112.8 72 72.2
Duzib235G1425 Durio zibethinus HOM05D005284 ORTHO05D006609 2.2e-23 112.8 61 78.7
MD10G1243300 Malus domestica HOM05D005284 ORTHO05D006609 2.2e-23 112.8 61 78.7
Nitab4.5_0000607g0120 Nicotiana tabacum HOM05D005284 ORTHO05D006609 2.2e-23 112.8 129 46.5
FvH4_3g11170 Fragaria vesca HOM05D005284 ORTHO05D006609 2.8e-23 112.5 62 77.4
Lj2C336G9 Lonicera japonica HOM05D005284 ORTHO05D006609 2.8e-23 112.5 100 59.0
RcHm_v2.0_Chr5g0018081 Rosa chinensis HOM05D005284 ORTHO05D006609 2.8e-23 112.5 62 77.4
Atru.chr10.695 Acer truncatum HOM05D005284 ORTHO05D006609 3.7e-23 112.1 61 80.3
Lalb_Chr12g0208701 Lupinus albus HOM05D005284 ORTHO05D006609 3.7e-23 112.1 61 77.0
QL05p064527 Quercus lobata HOM05D005284 ORTHO05D006609 3.7e-23 112.1 61 80.3
EL10Ac9g22329 Beta vulgaris HOM05D005284 ORTHO05D006609 4.8e-23 111.7 61 77.0
FAN16G1000 Fragaria x ananassa HOM05D005284 ORTHO05D006609 4.8e-23 111.7 62 77.4
CAN.G39.30 Capsicum annuum HOM05D005284 ORTHO05D006609 6.3e-23 111.3 129 46.5
Eucgr.D01014 Eucalyptus grandis HOM05D005284 ORTHO05D006609 8.2e-23 110.9 89 61.8
Gohir.A10G005900 Gossypium hirsutum HOM05D005284 ORTHO05D006609 8.2e-23 110.9 61 75.4
Gohir.D10G005900 Gossypium hirsutum HOM05D005284 ORTHO05D006609 8.2e-23 110.9 61 75.4
Gorai.011G006700 Gossypium raimondii HOM05D005284 ORTHO05D006609 8.2e-23 110.9 61 75.4
MD05G1265300 Malus domestica HOM05D005284 ORTHO05D006609 8.2e-23 110.9 119 49.6
Psat7g094280 Pisum sativum HOM05D005284 ORTHO05D006609 8.2e-23 110.9 61 75.4
arahy.Tifrunner.gnm1.ann1.06Y4PY Arachis hypogaea HOM05D005284 ORTHO05D006609 1.1e-22 110.5 66 69.7
Ca_18306_v3 Cicer arietinum L. HOM05D005284 ORTHO05D006609 1.1e-22 110.5 61 75.4
Cc08_g07170 Coffea canephora HOM05D005284 ORTHO05D006609 1.1e-22 110.5 61 78.7
Medtr4g094452 Medicago truncatula HOM05D005284 ORTHO05D006609 1.1e-22 110.5 61 75.4
Phvul.002G201500 Phaseolus vulgaris HOM05D005284 ORTHO05D006609 1.1e-22 110.5 61 77.0
Potri.011G157500 Populus trichocarpa HOM05D005284 ORTHO05D006609 1.1e-22 110.5 61 78.7
Lj4g0006881 Lotus japonicus HOM05D005284 ORTHO05D006609 1.4e-22 110.2 61 77.0
TPR.G23781 Trifolium pratense HOM05D005284 ORTHO05D006609 1.4e-22 110.2 61 75.4
CiPaw.09G147600 Carya illinoinensis HOM05D005284 ORTHO05D006609 1.8e-22 109.8 61 78.7
ECA234G4512 Erigeron canadensis HOM05D005284 ORTHO05D006609 1.8e-22 109.8 89 59.6
Prupe.4G100600 Prunus persica HOM05D005284 ORTHO05D006609 1.8e-22 109.8 89 60.7
FAN21G1306 Fragaria x ananassa HOM05D005284 ORTHO05D006609 2.4e-22 109.4 62 75.8
Sc04g0004240 Simmondsia chinensis HOM05D005284 ORTHO05D006609 2.4e-22 109.4 61 75.4
Ciclev10016195m.g Citrus clementina HOM05D005284 ORTHO05D006609 3.1e-22 109.0 61 75.4
Cpa.g.sc489.2 Carica papaya HOM05D005284 ORTHO05D006609 4.1e-22 108.6 89 60.7
VMungo0251G0080 Vigna mungo HOM05D005284 ORTHO05D006609 4.1e-22 108.6 61 75.4
Cfa000771 Carpinus fangiana HOM05D005284 ORTHO05D006609 5.3e-22 108.2 61 77.0
AUR62042202 Chenopodium quinoa HOM05D005284 ORTHO05D006609 5.3e-22 108.2 63 71.4
SGA_v2.0_scaffold1G00293 Striga asiatica HOM05D006189 ORTHO05D007765 5.3e-22 108.2 56 78.6
AT5G44450 Arabidopsis thaliana HOM05D005284 ORTHO05D006609 7.0e-22 107.8 60 75.0
FAN25G2940 Fragaria x ananassa HOM05D005284 ORTHO05D006609 7.0e-22 107.8 62 74.2
SEGI_24201 Sequoiadendron giganteum HOM05D005284 ORTHO05D006609 7.0e-22 107.8 61 73.8
MSTRG.7559 Avicennia marina HOM05D005284 ORTHO05D006609 9.1e-22 107.5 61 75.4
Migut.M01924 Erythranthe guttata HOM05D005284 ORTHO05D006609 9.1e-22 107.5 61 73.8
CSS0000752 Camellia sinensis var. sinensis HOM05D005284 ORTHO05D006609 1.2e-21 107.1 51 92.2
Thhalv10000956m.g Eutrema salsugineum HOM05D005284 ORTHO05D006609 1.2e-21 107.1 61 75.4
THA.LOC104812070 Tarenaya hassleriana HOM05D005284 ORTHO05D006609 1.2e-21 107.1 61 75.4
Glyma.08G079300 Glycine max HOM05D005284 ORTHO05D006609 1.5e-21 106.7 61 73.8
Sed0002797 Sechium edule HOM05D005284 ORTHO05D006609 1.5e-21 106.7 71 66.2
Sabra11G0142700 Salix brachista HOM05D005284 ORTHO05D006609 2.0e-21 106.3 89 59.6
GSVIVG01021778001 Vitis vinifera HOM05D005284 ORTHO05D006609 2.0e-21 106.3 61 72.1
Oeu000506.1 Olea europaea HOM05D005284 ORTHO05D006609 2.6e-21 105.9 56 78.6
PSO541G1959 Papaver somniferum HOM05D005284 ORTHO05D006609 2.6e-21 105.9 89 61.8
PSO675G4367 Papaver somniferum HOM05D005284 ORTHO05D006609 2.6e-21 105.9 89 61.8
SalBow8G0467 Salvia bowleyana HOM05D005284 ORTHO05D006609 2.6e-21 105.9 56 76.8
MELO3C007049.2 Cucumis melo HOM05D005284 ORTHO05D006609 3.4e-21 105.5 89 57.3
SalBow3G1375 Salvia bowleyana HOM05D005284 ORTHO05D006609 3.4e-21 105.5 56 76.8
CsaV3_6G052590 Cucumis sativus L. HOM05D005284 ORTHO05D006609 4.5e-21 105.1 89 57.3
CDE02G0074 Ceratophyllum demersum HOM05D005284 ORTHO05D006609 7.7e-21 104.4 61 70.5
Ah.01g003600 Amaranthus hybridus HOM05D005284 ORTHO05D006609 1.0e-20 104.0 61 70.5
CDE05G2614 Ceratophyllum demersum HOM05D005284 ORTHO05D006609 1.0e-20 104.0 61 70.5
CARHR178630 Cardamine hirsuta HOM05D005284 ORTHO05D006609 1.3e-20 103.6 61 75.4
Os03g0780900 Oryza sativa ssp. japonica HOM05D005284 ORTHO05D006609 1.3e-20 103.6 61 72.1
SMO364G0300 Selaginella moellendorffii HOM05D005284 ORTHO05D006609 1.3e-20 103.6 58 75.9
TAR626G0222 Trochodendron aralioides HOM05D005284 ORTHO05D006609 1.3e-20 103.6 112 49.1
Zm00001eb059610 Zea mays HOM05D005284 ORTHO05D006609 1.7e-20 103.2 61 70.5
Carub.0008s0404 Capsella rubella HOM05D005284 ORTHO05D006609 2.2e-20 102.8 61 73.8
Aqoxy1G01504 Aquilegia oxysepala HOM05D005284 ORTHO05D006609 2.9e-20 102.4 89 56.2
Aqoxy1G01508 Aquilegia oxysepala HOM05D005284 ORTHO05D006609 2.9e-20 102.4 89 56.2
unitig_748.g7349 Utricularia gibba HOM05D005284 ORTHO05D006609 2.9e-20 102.4 56 76.8
BcaC04g21829 Brassica carinata HOM05D005284 ORTHO05D006609 3.8e-20 102.1 61 72.1
Sp2g09280 Schrenkiella parvula HOM05D005284 ORTHO05D006609 3.8e-20 102.1 61 72.1
ATR0763G041 Amborella trichopoda HOM05D005284 ORTHO05D006609 5.0e-20 101.7 87 56.3
C09p26950 Brassica napus HOM05D005284 ORTHO05D006609 5.0e-20 101.7 62 69.4
BolC9t55580H Brassica oleracea HOM05D005284 ORTHO05D006609 5.0e-20 101.7 62 69.4
BcaB07g30944 Brassica carinata HOM05D005284 ORTHO05D006609 6.5e-20 101.3 61 72.1
Glyma.05G124100 Glycine max HOM05D005284 ORTHO05D006609 6.5e-20 101.3 61 70.5
Aa31LG9G8740 Aethionema arabicum HOM05D005284 ORTHO05D006609 1.1e-19 100.5 61 70.5
HPP92_000943 Vanilla planifolia HOM05D005284 ORTHO05D006609 1.1e-19 100.5 61 68.9
AL8G15400 Arabidopsis lyrata HOM05D005284 ORTHO05D006609 1.4e-19 100.1 61 70.5
BcaC06g31615 Brassica carinata HOM05D005284 ORTHO05D006609 1.9e-19 99.8 61 70.5
A06p47190 Brassica napus HOM05D005284 ORTHO05D006609 1.9e-19 99.8 61 70.5
A09p21140 Brassica napus HOM05D005284 ORTHO05D006609 1.9e-19 99.8 62 67.7
BraA06t27590Z Brassica rapa HOM05D005284 ORTHO05D006609 1.9e-19 99.8 61 70.5
BraA09t37720Z Brassica rapa HOM05D005284 ORTHO05D006609 1.9e-19 99.8 62 67.7
Nn7g37791 Nelumbo nucifera HOM05D005284 ORTHO05D006609 1.9e-19 99.8 56 75.0
BcaC06g34553 Brassica carinata HOM05D005284 ORTHO05D006609 9.4e-19 97.4 61 68.9
C07p27240 Brassica napus HOM05D005284 ORTHO05D006609 9.4e-19 97.4 61 68.9
BolC7t43252H Brassica oleracea HOM05D005284 ORTHO05D006609 9.4e-19 97.4 61 68.9
Mapoly0083s0001 Marchantia polymorpha HOM05D005284 ORTHO05D006609 5.7e-16 88.2 56 67.9
MCO11G684 Micromonas commoda HOM05D005284 ORTHO05D006609 9.7e-16 87.4 75 48.0
Aa31LG2G17800 Aethionema arabicum HOM05D005284 ORTHO05D006609 2.8e-15 85.9 49 71.4
Solyc02g021700.4 Solanum lycopersicum HOM05D005284 ORTHO05D006609 4.1e-14 82.0 50 70.0
PGR083G0243 Punica granatum HOM05D005284 ORTHO05D006609 5.3e-14 81.6 69 52.2
PGSC0003DMG400015105 Solanum tuberosum HOM05D005284 ORTHO05D006609 5.3e-14 81.6 50 70.0
CBR_g19259 Chara braunii HOM05D005284 ORTHO05D006609 9.1e-14 80.9 59 57.6
ClCG01G025350 Citrullus lanatus HOM05D005284 ORTHO05D006609 1.2e-13 80.5 39 82.1
AUR62033057 Chenopodium quinoa HOM05D005284 ORTHO05D006609 2.0e-13 79.7 39 82.1
Thecc.06G010000 Theobroma cacao HOM05D005284 ORTHO05D006609 2.0e-13 79.7 39 82.1
CSS0004293 Camellia sinensis var. sinensis HOM05D005284 ORTHO05D006609 5.9e-13 78.2 34 94.1
AagrBONN_evm.TU.Sc2ySwM_344.3509 Anthoceros agrestis HOM05D005284 ORTHO05D006609 2.9e-12 75.9 45 73.3
PRCOL_00002523 Prasinoderma coloniale HOM05D005284 ORTHO05D006609 2.9e-12 75.9 56 55.4
CARHR114890 Cardamine hirsuta HOM05D005284 ORTHO05D006609 1.5e-11 73.6 39 79.5
Cre06.g274400 Chlamydomonas reinhardtii HOM05D005284 ORTHO05D006609 5.5e-11 71.6 58 50.0
MBI18_g27137_MAGBIO Magnolia biondii HOM05D005284 ORTHO05D006609 5.5e-11 71.6 39 71.8
Glyma.04G136150 Glycine max HOM05D005284 ORTHO05D006609 7.2e-11 71.2 34 79.4


User provided reference genes

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