Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23691 Davidia involucrata HOM05D009304 ORTHO05D003109 4.4e-201 704.5 383 100.0
Dinv01395 Davidia involucrata HOM05D009304 ORTHO05D003109 7.8e-57 225.3 260 62.3
CSS0013822 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 1.7e-51 207.6 261 57.5
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 3.8e-51 206.5 265 53.6
CSS0028025 Camellia sinensis var. sinensis HOM05D009304 ORTHO05D003109 8.4e-51 205.3 261 57.1
Cc05_g06660 Coffea canephora HOM05D009304 ORTHO05D003109 2.6e-36 157.1 264 46.6
TAR626G0020 Trochodendron aralioides HOM05D004441 ORTHO05D003109 2.9e-35 153.7 268 44.4
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 1.4e-34 151.4 282 44.3
Nitab4.5_0003018g0090 Nicotiana tabacum HOM05D009304 ORTHO05D003109 1.6e-33 147.9 283 44.5
Hma1.2p1_0875F.1_g231510 Hydrangea macrophylla HOM05D009304 ORTHO05D003109 1.3e-32 144.8 271 45.8
Actinidia11074 Actinidia chinensis HOM05D002331 ORTHO05D003109 7.4e-31 139.0 266 47.4
PGSC0003DMG400018324 Solanum tuberosum HOM05D009304 ORTHO05D003109 7.4e-31 139.0 280 43.9
Solyc07g054560.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 3.7e-30 136.7 279 42.7
Sopen07g028460 Solanum pennellii HOM05D009304 ORTHO05D003109 4.8e-30 136.3 282 43.3
Nitab4.5_0002370g0010 Nicotiana tabacum HOM05D009304 ORTHO05D003109 6.9e-29 132.5 215 47.4
Sc17g0006420 Simmondsia chinensis HOM05D004441 ORTHO05D003109 1.1e-23 115.2 280 40.4
TAR627G0319 Trochodendron aralioides HOM05D004441 ORTHO05D003109 2.5e-23 114.0 193 45.6
Lsat_1_v5_gn_4_70241 Lactuca sativa HOM05D009304 ORTHO05D003109 8.2e-22 109.0 270 39.6
DCAR_009737 Daucus carota HOM05D009304 ORTHO05D003109 3.1e-21 107.1 280 41.8
Peaxi162Scf00007g00287 Petunia axillaris HOM05D009304 ORTHO05D003109 3.1e-21 107.1 199 46.2
Lj1A1210T53 Lonicera japonica HOM05D004441 ORTHO05D003109 9.1e-21 105.5 260 42.3
Prupe.4G040000 Prunus persica HOM05D004441 ORTHO05D003109 1.2e-20 105.1 293 37.5
Aqoxy1G02647 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 1.5e-20 104.8 287 40.4
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 2.0e-20 104.4 265 41.5
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 2.0e-20 104.4 265 41.5
QL08p037640 Quercus lobata HOM05D010652 ORTHO05D003109 3.4e-20 103.6 271 39.1
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 4.5e-20 103.2 218 41.7
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 4.5e-20 103.2 263 39.5
Actinidia09882 Actinidia chinensis HOM05D009304 ORTHO05D003109 5.9e-20 102.8 227 42.7
Rhsim04G0066200 Rhododendron simsii HOM05D009304 ORTHO05D003109 5.9e-20 102.8 142 54.9
Hma1.2p1_0280F.1_g112760 Hydrangea macrophylla HOM05D009304 ORTHO05D003109 2.9e-19 100.5 156 49.4
CAN.G996.13 Capsicum annuum HOM05D009304 ORTHO05D003109 8.5e-19 99.0 240 39.2
Medtr2g012750 Medicago truncatula HOM05D004441 ORTHO05D003109 2.5e-18 97.4 291 34.4
FvH4_6g44980 Fragaria vesca HOM05D010652 ORTHO05D003109 5.5e-18 96.3 303 34.3
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 1.6e-17 94.7 262 37.4
FAN05G0655 Fragaria x ananassa HOM05D010652 ORTHO05D003109 2.1e-17 94.4 291 35.1
FAN05G4761 Fragaria x ananassa HOM05D010652 ORTHO05D003109 2.1e-17 94.4 291 35.1
Nn1g03959 Nelumbo nucifera HOM05D004441 ORTHO05D003109 2.7e-17 94.0 175 40.6
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 2.7e-17 94.0 263 37.3
TPR.G36719 Trifolium pratense HOM05D004441 ORTHO05D003109 3.6e-17 93.6 261 38.3
Psat7g199680 Pisum sativum HOM05D010177 ORTHO05D003109 6.1e-17 92.8 232 36.6
FAN09G1981 Fragaria x ananassa HOM05D010652 ORTHO05D003109 7.9e-17 92.4 261 35.2
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 2.3e-16 90.9 264 37.1
Glyma.15G069600 Glycine max HOM05D004441 ORTHO05D003109 3.0e-16 90.5 243 39.1
ClCG03G005640 Citrullus lanatus HOM05D004441 ORTHO05D003109 5.1e-16 89.7 254 36.2
CsaV3_1G011910 Cucumis sativus L. HOM05D004441 ORTHO05D003109 1.1e-15 88.6 227 39.2
PSO675G8062 Papaver somniferum HOM05D004441 ORTHO05D003109 1.5e-15 88.2 289 36.7
Eucgr.A01789 Eucalyptus grandis HOM05D004441 ORTHO05D003109 2.6e-15 87.4 279 37.3
FAN14G1127 Fragaria x ananassa HOM05D010652 ORTHO05D003109 4.4e-15 86.7 303 32.7
Solyc01g106180.3 Solanum lycopersicum HOM05D009304 ORTHO05D003109 7.4e-15 85.9 137 49.6
TWI63G0258 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 1.3e-14 85.1 260 34.6
Glyma.12G108500 Glycine max HOM05D010177 ORTHO05D003109 1.7e-14 84.7 243 34.6
Lsat_1_v5_gn_8_132261 Lactuca sativa HOM05D009304 ORTHO05D003109 1.7e-14 84.7 242 39.3
Haze_13109 Corylus avellana HOM05D010652 ORTHO05D003109 2.2e-14 84.3 278 34.9
Sopen12g021050 Solanum pennellii HOM05D009304 ORTHO05D003109 2.2e-14 84.3 121 52.1
Oeu025512.1 Olea europaea HOM05D009304 ORTHO05D003109 2.8e-14 84.0 260 35.0
Cpa.g.sc34.119 Carica papaya HOM05D004441 ORTHO05D003109 8.2e-14 82.4 259 37.8
SalBow8G3623 Salvia bowleyana HOM05D004441 ORTHO05D003109 8.2e-14 82.4 280 36.1
SalBow8G4382 Salvia bowleyana HOM05D004441 ORTHO05D003109 8.2e-14 82.4 280 36.1
FAN16G1227 Fragaria x ananassa HOM05D004441 ORTHO05D003109 2.4e-13 80.9 271 36.9
FAN25G3261 Fragaria x ananassa HOM05D004441 ORTHO05D003109 3.1e-13 80.5 271 36.9
Gohir.D05G166400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 3.1e-13 80.5 289 33.2
CiPaw.09G160900 Carya illinoinensis HOM05D004441 ORTHO05D003109 5.3e-13 79.7 258 36.4
COL.COLO4_31538 Corchorus olitorius HOM05D004441 ORTHO05D003109 5.3e-13 79.7 263 33.1
Psat1g207120 Pisum sativum HOM05D004441 ORTHO05D003109 5.3e-13 79.7 246 36.6
Cfa014564 Carpinus fangiana HOM05D010652 ORTHO05D003109 6.9e-13 79.3 234 35.5
FAN21G2327 Fragaria x ananassa HOM05D004441 ORTHO05D003109 1.2e-12 78.6 242 37.6
Gohir.A05G163400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.2e-12 78.6 265 33.2
Lalb_Chr19g0135401 Lupinus albus HOM05D010177 ORTHO05D003109 1.2e-12 78.6 252 36.1
Ca_20682_v3 Cicer arietinum L. HOM05D010177 ORTHO05D003109 1.5e-12 78.2 279 33.7
Ca_00297_v3 Cicer arietinum L. HOM05D004441 ORTHO05D003109 2.0e-12 77.8 263 35.7
Gorai.009G171500 Gossypium raimondii HOM05D004441 ORTHO05D003109 2.0e-12 77.8 288 32.6
Glyma.U031310 Glycine max HOM05D010177 ORTHO05D003109 2.6e-12 77.4 242 33.9
arahy.Tifrunner.gnm1.ann1.7X1CID Arachis hypogaea HOM05D010177 ORTHO05D003109 3.4e-12 77.0 298 34.9
CANSAT64G2194 Cannabis sativa HOM05D010652 ORTHO05D003109 4.5e-12 76.6 274 35.4
Sabra11G0031800 Salix brachista HOM05D004441 ORTHO05D003109 4.5e-12 76.6 265 35.8
FAN11G1619 Fragaria x ananassa HOM05D004441 ORTHO05D003109 7.7e-12 75.9 278 35.3
Lalb_Chr15g0089961 Lupinus albus HOM05D004441 ORTHO05D003109 7.7e-12 75.9 293 32.1
FvH4_3g04520 Fragaria vesca HOM05D004441 ORTHO05D003109 1.0e-11 75.5 275 36.0
Solyc08g068460.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 1.0e-11 75.5 258 34.9
Thecc.06G194800 Theobroma cacao HOM05D004441 ORTHO05D003109 2.2e-11 74.3 261 32.2
MD10G1300500 Malus domestica HOM05D004441 ORTHO05D003109 3.8e-11 73.6 288 34.0
Potri.011G045700 Populus trichocarpa HOM05D004441 ORTHO05D003109 5.0e-11 73.2 304 34.2
Lalb_Chr22g0356441 Lupinus albus HOM05D010177 ORTHO05D003109 8.5e-11 72.4 235 32.3
ClCG02G001220 Citrullus lanatus HOM05D032711 ORTHO05D003109 1.1e-10 72.0 245 31.8
Duzib160G0195 Durio zibethinus HOM05D004441 ORTHO05D003109 1.1e-10 72.0 264 31.4
Lj3g0011122 Lotus japonicus HOM05D010177 ORTHO05D003109 1.1e-10 72.0 264 34.5
Migut.M01162 Erythranthe guttata HOM05D004441 ORTHO05D003109 1.9e-10 71.2 244 34.4
Haze_06542 Corylus avellana HOM05D004441 ORTHO05D003109 3.2e-10 70.5 220 36.4
Rhsim13G0175700 Rhododendron simsii HOM05D004441 ORTHO05D003109 3.2e-10 70.5 259 36.7
arahy.Tifrunner.gnm1.ann1.KXRU9A Arachis hypogaea HOM05D004441 ORTHO05D003109 5.5e-10 69.7 262 34.4
Sed0013174 Sechium edule HOM05D004441 ORTHO05D003109 7.2e-10 69.3 206 36.9
Cc00_g11510 Coffea canephora HOM05D004441 ORTHO05D003109 1.6e-09 68.2 261 33.0
DCAR_004123 Daucus carota HOM05D004441 ORTHO05D003109 1.6e-09 68.2 217 36.4
ECA234G0694 Erigeron canadensis HOM05D009304 ORTHO05D003109 1.6e-09 68.2 268 36.6
Manes.13G149800 Manihot esculenta HOM05D010652 ORTHO05D003109 2.1e-09 67.8 268 32.8
Manes.17G041200 Manihot esculenta HOM05D004441 ORTHO05D003109 2.1e-09 67.8 290 33.8
Sed0017971 Sechium edule HOM05D002331 ORTHO05D002624 2.7e-09 67.4 243 34.2
Actinidia05598 Actinidia chinensis HOM05D004441 ORTHO05D003109 3.6e-09 67.0 253 35.6
Aqoxy4G01294 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 4.7e-09 66.6 284 35.6
CsaV3_7G004220 Cucumis sativus L. HOM05D032711 ORTHO05D003109 7.9e-09 65.9 238 33.2
TWI38G0459 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 7.9e-09 65.9 277 35.7
Solyc09g082960.1 Solanum lycopersicum HOM05D009304 ORTHO05D003109 1.0e-08 65.5 82 54.9
VMungo1127G1338 Vigna mungo HOM05D010177 ORTHO05D003109 1.4e-08 65.1 238 34.0
MBI18_g13205_MAGBIO Magnolia biondii HOM05D004441 ORTHO05D003109 1.8e-08 64.7 273 33.0
Sed0005410 Sechium edule HOM05D002331 ORTHO05D002624 1.8e-08 64.7 237 31.2
Nn1g06687 Nelumbo nucifera HOM05D004441 ORTHO05D003109 2.3e-08 64.3 259 34.0
Prupe.3G233700 Prunus persica HOM05D010652 ORTHO05D003109 2.3e-08 64.3 330 30.0
Potri.004G037100 Populus trichocarpa HOM05D004441 ORTHO05D003109 5.2e-08 63.2 258 35.7
PGR142G1157 Punica granatum HOM05D010652 ORTHO05D003109 5.2e-08 63.2 272 31.2
Cfa000385 Carpinus fangiana HOM05D004441 ORTHO05D003109 8.8e-08 62.4 219 36.5
Gorai.010G150800 Gossypium raimondii HOM05D004441 ORTHO05D003109 1.5e-07 61.6 260 30.0
Phvul.011G112800 Phaseolus vulgaris HOM05D010177 ORTHO05D003109 2.0e-07 61.2 324 30.9
PSO541G1557 Papaver somniferum HOM05D004441 ORTHO05D003109 3.3e-07 60.5 295 32.9
PGR042G0321 Punica granatum HOM05D004441 ORTHO05D003109 3.3e-07 60.5 276 34.1
arahy.Tifrunner.gnm1.ann1.48X98F Arachis hypogaea HOM05D010177 ORTHO05D003109 4.4e-07 60.1 244 30.7
Sabra05G0071200 Salix brachista HOM05D010652 ORTHO05D003109 4.4e-07 60.1 253 31.6
Lalb_Chr18g0059831 Lupinus albus HOM05D004441 ORTHO05D003109 5.7e-07 59.7 141 40.4
Oeu026007.1 Olea europaea HOM05D004441 ORTHO05D003109 5.7e-07 59.7 270 33.7
CiPaw.03G171700 Carya illinoinensis HOM05D004441 ORTHO05D003109 7.4e-07 59.3 239 31.4
Dinv39787 Davidia involucrata HOM05D004441 ORTHO05D003109 7.4e-07 59.3 249 33.3
Duzib192G0975 Durio zibethinus HOM05D004441 ORTHO05D003109 7.4e-07 59.3 260 28.8
Gohir.A06G124300 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.3e-06 58.5 260 29.6
Gohir.D06G129200 Gossypium hirsutum HOM05D004441 ORTHO05D003109 1.7e-06 58.2 261 29.9
VMungo1080G0072 Vigna mungo HOM05D010177 ORTHO05D003109 3.7e-06 57.0 243 34.6
arahy.Tifrunner.gnm1.ann1.W0S7NR Arachis hypogaea HOM05D004441 ORTHO05D003109 4.8e-06 56.6 163 41.7
PGR004G2153 Punica granatum HOM05D004441 ORTHO05D003109 4.8e-06 56.6 293 32.1
RcHm_v2.0_Chr5g0007441 Rosa chinensis HOM05D004441 ORTHO05D003109 4.8e-06 56.6 294 34.0
Atru.chr6.3043 Acer truncatum HOM05D010652 ORTHO05D003109 8.2e-06 55.8 170 35.9
CDE02G3343 Ceratophyllum demersum HOM05D004441 ORTHO05D003109 8.2e-06 55.8 208 30.8
Glyma.U031322 Glycine max HOM05D010177 ORTHO05D003109 8.2e-06 55.8 173 35.8
Psat5g270560 Pisum sativum HOM05D010177 ORTHO05D003109 8.2e-06 55.8 236 30.5


User provided reference genes

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