Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23644 Davidia involucrata HOM05D005953 ORTHO05D004056 1.1e-21 106.3 79 100.0
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 9.3e-13 76.6 80 57.5
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 2.1e-12 75.5 80 60.0
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 1.3e-11 72.8 79 54.4
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 1.8e-11 72.4 80 56.2
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 3.9e-11 71.2 82 53.7
Nn1g04077 Nelumbo nucifera HOM05D005953 ORTHO05D004056 5.6e-10 67.4 84 65.5
Prupe.3G137400 Prunus persica HOM05D005953 ORTHO05D004056 7.4e-10 67.0 84 71.4
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 1.6e-09 65.9 81 53.1
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 1.6e-09 65.9 79 48.1
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.6e-09 65.9 79 50.6
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 1.6e-09 65.9 79 64.6
CSS0043101 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 2.1e-09 65.5 80 77.5
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 2.8e-09 65.1 80 65.0
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 4.8e-09 64.3 79 60.8
CSS0034597 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 6.2e-09 63.9 80 77.5
Eucgr.A01816 Eucalyptus grandis HOM05D005953 ORTHO05D004056 1.4e-08 62.8 79 59.5
Actinidia30473 Actinidia chinensis HOM05D005953 ORTHO05D004056 1.8e-08 62.4 79 73.4
Actinidia39315 Actinidia chinensis HOM05D005953 ORTHO05D004056 1.8e-08 62.4 79 73.4
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 4.0e-08 61.2 83 53.0
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 4.0e-08 61.2 80 50.0
Actinidia11037 Actinidia chinensis HOM05D005953 ORTHO05D004056 5.3e-08 60.8 80 68.8
AT4G28290 Arabidopsis thaliana HOM05D005953 ORTHO05D004056 6.9e-08 60.5 81 55.6
CSS0009794 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 6.9e-08 60.5 79 68.4
CSS0043976 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 6.9e-08 60.5 79 68.4
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 1.2e-07 59.7 80 48.8
TWI36G1201 Tripterygium wilfordii HOM05D005953 ORTHO05D004056 1.2e-07 59.7 79 63.3
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.5e-07 59.3 82 47.6
Nitab4.5_0000512g0060 Nicotiana tabacum HOM05D005953 ORTHO05D004056 1.5e-07 59.3 83 59.0
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 1.5e-07 59.3 83 54.2
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 2.0e-07 58.9 80 48.8
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 2.0e-07 58.9 80 48.8
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 2.0e-07 58.9 83 48.2
Oeu002560.3 Olea europaea HOM05D005953 ORTHO05D004056 2.0e-07 58.9 84 59.5
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 2.6e-07 58.5 80 51.2
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 2.6e-07 58.5 81 50.6
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 2.6e-07 58.5 81 50.6
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 2.6e-07 58.5 81 66.7
CiPaw.03G176600 Carya illinoinensis HOM05D005953 ORTHO05D004056 3.4e-07 58.2 79 63.3
Dinv26420 Davidia involucrata HOM05D005953 ORTHO05D184478 3.4e-07 58.2 75 73.3
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 3.4e-07 58.2 79 48.1
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 3.4e-07 58.2 79 48.1
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 4.5e-07 57.8 79 40.5
Peaxi162Scf00206g01011 Petunia axillaris HOM05D005953 ORTHO05D004056 5.8e-07 57.4 85 60.0
PGR042G2028 Punica granatum HOM05D005953 ORTHO05D004056 5.8e-07 57.4 90 43.3
Nitab4.5_0002575g0070 Nicotiana tabacum HOM05D005953 ORTHO05D004056 7.6e-07 57.0 82 47.6
TAR627G0894 Trochodendron aralioides HOM05D005953 ORTHO05D004056 7.6e-07 57.0 80 65.0
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 9.9e-07 56.6 81 45.7
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 9.9e-07 56.6 79 45.6
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 9.9e-07 56.6 83 50.6
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 1.3e-06 56.2 79 48.1
PSO675G7471 Papaver somniferum HOM05D005953 ORTHO05D004056 1.7e-06 55.8 45 62.2
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 2.2e-06 55.5 81 46.9
Peaxi162Scf00008g00097 Petunia axillaris HOM05D005953 ORTHO05D004056 2.2e-06 55.5 51 52.9
BcaC09g50494 Brassica carinata HOM05D005953 ORTHO05D004056 2.9e-06 55.1 81 56.8
A01p19690 Brassica napus HOM05D005953 ORTHO05D004056 2.9e-06 55.1 81 56.8
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 2.9e-06 55.1 81 48.1
BraA01t01902Z Brassica rapa HOM05D005953 ORTHO05D004056 2.9e-06 55.1 81 56.8
vmacro12298 Vaccinium macrocarpon HOM05D005953 ORTHO05D004056 2.9e-06 55.1 84 66.7
arahy.Tifrunner.gnm1.ann1.4Y3SQC Arachis hypogaea HOM05D005953 ORTHO05D004056 3.8e-06 54.7 79 64.6
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 3.8e-06 54.7 81 44.4
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 3.8e-06 54.7 82 45.1
Nitab4.5_0002253g0010 Nicotiana tabacum HOM05D005953 ORTHO05D004056 3.8e-06 54.7 50 62.0
Cfa014612 Carpinus fangiana HOM05D005953 ORTHO05D004056 4.9e-06 54.3 80 66.2
BcaNung01582 Brassica carinata HOM05D005953 ORTHO05D004056 6.4e-06 53.9 81 65.4
Lsat_1_v5_gn_3_37261 Lactuca sativa HOM05D005953 ORTHO05D004056 6.4e-06 53.9 81 59.3
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 6.4e-06 53.9 81 43.2
CARHR236000 Cardamine hirsuta HOM05D005953 ORTHO05D004056 8.4e-06 53.5 81 64.2
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 8.4e-06 53.5 79 43.0
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 8.4e-06 53.5 84 42.9
Thhalv10026705m.g Eutrema salsugineum HOM05D005953 ORTHO05D004056 8.4e-06 53.5 82 67.1
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 8.4e-06 53.5 79 39.2
Nitab4.5_0002169g0120 Nicotiana tabacum HOM05D005953 ORTHO05D004056 8.4e-06 53.5 81 55.6
Sed0010329 Sechium edule HOM05D005953 ORTHO05D004056 8.4e-06 53.5 82 62.2
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 8.4e-06 53.5 82 45.1


User provided reference genes

Program Settings