Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23632 Davidia involucrata HOM05D004801 ORTHO05D005747 1.8e-147 526.2 318 100.0
Hma1.2p1_0002F.1_g001940 Hydrangea macrophylla HOM05D004801 ORTHO05D005747 1.6e-63 247.3 267 65.9
CSS0019593 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 2.7e-55 219.9 270 58.5
Dinv26411 Davidia involucrata HOM05D004801 ORTHO05D005747 1.0e-49 201.4 265 58.5
Oeu019133.1 Olea europaea HOM05D004801 ORTHO05D005747 2.2e-41 173.7 259 45.6
TAR626G1782 Trochodendron aralioides HOM05D004801 ORTHO05D005747 6.5e-41 172.2 283 43.8
Cfa014619 Carpinus fangiana HOM05D004801 ORTHO05D005747 1.6e-39 167.5 264 53.4
Actinidia11029 Actinidia chinensis HOM05D004801 ORTHO05D005747 1.4e-38 164.5 274 47.4
Haze_13169 Corylus avellana HOM05D004801 ORTHO05D005747 2.3e-38 163.7 264 52.3
CSS0042810 Camellia sinensis var. sinensis HOM05D004801 ORTHO05D005747 4.4e-37 159.5 260 49.6
Cc05_g07190 Coffea canephora HOM05D004801 ORTHO05D005747 4.4e-37 159.5 261 53.6
COL.COLO4_30200 Corchorus olitorius HOM05D004801 ORTHO05D005747 1.3e-36 157.9 261 48.3
SGA_v2.0_scaffold70G23526 Striga asiatica HOM05D004801 ORTHO05D005747 1.3e-36 157.9 261 46.0
QL08p038965 Quercus lobata HOM05D004801 ORTHO05D005747 2.2e-36 157.1 265 52.8
CiPaw.03G177800 Carya illinoinensis HOM05D004801 ORTHO05D005747 4.8e-36 156.0 208 57.7
vmacro12308 Vaccinium macrocarpon HOM05D004801 ORTHO05D005747 6.3e-36 155.6 270 45.9
Sc21g0002890 Simmondsia chinensis HOM05D004801 ORTHO05D005747 8.3e-36 155.2 267 40.8
Migut.M00296 Erythranthe guttata HOM05D004801 ORTHO05D005747 1.4e-35 154.5 261 52.5
Lsat_1_v5_gn_8_135921 Lactuca sativa HOM05D004801 ORTHO05D005747 5.4e-35 152.5 260 49.6
Manes.13G146300 Manihot esculenta HOM05D004801 ORTHO05D005747 5.4e-35 152.5 279 40.1
Gorai.005G201200 Gossypium raimondii HOM05D004801 ORTHO05D005747 1.6e-34 151.0 260 41.9
GSVIVG01020552001 Vitis vinifera HOM05D004801 ORTHO05D005747 2.0e-34 150.6 82 84.1
DCAR_013013 Daucus carota HOM05D004801 ORTHO05D005747 2.7e-34 150.2 259 41.3
HanXRQChr17g0559281 Helianthus annuus HOM05D004801 ORTHO05D005747 3.5e-34 149.8 260 48.8
Sed0013547 Sechium edule HOM05D004801 ORTHO05D005747 4.5e-34 149.4 258 40.3
EL10Ac9g20770 Beta vulgaris HOM05D004801 ORTHO05D005747 5.9e-34 149.1 270 54.1
Gohir.A03G156300 Gossypium hirsutum HOM05D004801 ORTHO05D005747 1.0e-33 148.3 260 43.5
Phvul.004G108100 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 1.3e-33 147.9 262 46.9
ClCG00G003550 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.7e-33 147.5 268 42.2
ClCG07G002870 Citrullus lanatus HOM05D004801 ORTHO05D005747 1.7e-33 147.5 268 42.2
MSTRG.12824 Avicennia marina HOM05D004801 ORTHO05D005747 2.3e-33 147.1 256 48.8
PGSC0003DMG400013144 Solanum tuberosum HOM05D004801 ORTHO05D005747 2.3e-33 147.1 261 44.4
Solyc10g008320.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 3.8e-33 146.4 266 44.7
Nitab4.5_0011784g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 5.0e-33 146.0 264 50.0
Gohir.D02G179400 Gossypium hirsutum HOM05D004801 ORTHO05D005747 6.6e-33 145.6 260 49.6
Thecc.02G180400 Theobroma cacao HOM05D004801 ORTHO05D005747 6.6e-33 145.6 262 45.8
Lalb_Chr24g0399901 Lupinus albus HOM05D004801 ORTHO05D005747 1.5e-32 144.4 265 41.9
Sopen10g004180 Solanum pennellii HOM05D004801 ORTHO05D005747 1.5e-32 144.4 263 44.9
Atru.chr6.2990 Acer truncatum HOM05D004801 ORTHO05D005747 1.9e-32 144.1 86 79.1
MELO3C018732.2 Cucumis melo HOM05D004801 ORTHO05D005747 1.9e-32 144.1 269 40.5
CsaV3_7G004470 Cucumis sativus L. HOM05D004801 ORTHO05D005747 3.3e-32 143.3 273 40.3
Rhsim06G0141800 Rhododendron simsii HOM05D004801 ORTHO05D005747 3.3e-32 143.3 98 70.4
VMungo0464G0320 Vigna mungo HOM05D004801 ORTHO05D005747 3.3e-32 143.3 257 38.5
Glyma.12G204600 Glycine max HOM05D004801 ORTHO05D005747 7.2e-32 142.1 267 40.4
Sed0002865 Sechium edule HOM05D004801 ORTHO05D005747 9.5e-32 141.7 260 46.5
SGA_v2.0_scaffold34G13950 Striga asiatica HOM05D004801 ORTHO05D005747 9.5e-32 141.7 269 47.2
Gorai.012G128300 Gossypium raimondii HOM05D004801 ORTHO05D005747 1.2e-31 141.4 260 53.8
Duzib132G1264 Durio zibethinus HOM05D004801 ORTHO05D005747 1.6e-31 141.0 259 39.0
RcHm_v2.0_Chr2g0126621 Rosa chinensis HOM05D004801 ORTHO05D005747 2.8e-31 140.2 252 45.2
ECA234G0944 Erigeron canadensis HOM05D004801 ORTHO05D005747 3.6e-31 139.8 243 45.7
Gohir.D04G142900 Gossypium hirsutum HOM05D004801 ORTHO05D005747 3.6e-31 139.8 260 53.8
unitig_46.g18595 Utricularia gibba HOM05D004801 ORTHO05D005747 4.7e-31 139.4 205 43.4
Duzib248G0607 Durio zibethinus HOM05D004801 ORTHO05D005747 6.1e-31 139.0 261 41.0
Gohir.A04G103500 Gossypium hirsutum HOM05D004801 ORTHO05D005747 6.1e-31 139.0 83 75.9
MD17G1239900 Malus domestica HOM05D004801 ORTHO05D005747 8.0e-31 138.7 261 40.6
Nitab4.5_0014741g0010 Nicotiana tabacum HOM05D004801 ORTHO05D005747 8.0e-31 138.7 261 42.9
VMungo0464G1438 Vigna mungo HOM05D004801 ORTHO05D005747 8.0e-31 138.7 261 51.3
Peaxi162Scf00059g00194 Petunia axillaris HOM05D004801 ORTHO05D005747 1.0e-30 138.3 267 44.6
Prupe.3G132500 Prunus persica HOM05D004801 ORTHO05D005747 1.0e-30 138.3 260 45.4
Nitab4.5_0000585g0130 Nicotiana tabacum HOM05D004801 ORTHO05D005747 1.4e-30 137.9 263 49.4
Ciclev10016785m.g Citrus clementina HOM05D004801 ORTHO05D005747 1.8e-30 137.5 94 70.2
Glyma.13G296700 Glycine max HOM05D004801 ORTHO05D005747 1.8e-30 137.5 261 45.2
HPP92_008364 Vanilla planifolia HOM05D004801 ORTHO05D005747 1.8e-30 137.5 213 44.1
Ah.08g215280 Amaranthus hybridus HOM05D004801 ORTHO05D005747 4.0e-30 136.3 260 39.6
Glyma.12G204500 Glycine max HOM05D004801 ORTHO05D005747 1.2e-29 134.8 262 38.2
TWI36G1772 Tripterygium wilfordii HOM05D004801 ORTHO05D005747 1.5e-29 134.4 262 48.1
Lj3g0028176 Lotus japonicus HOM05D004801 ORTHO05D005747 2.0e-29 134.0 267 36.7
AUR62040063 Chenopodium quinoa HOM05D004801 ORTHO05D005747 2.6e-29 133.7 277 49.5
arahy.Tifrunner.gnm1.ann1.G6M6JD Arachis hypogaea HOM05D004801 ORTHO05D005747 4.4e-29 132.9 284 45.1
SHI10398 Sapria himalayana HOM05D004801 ORTHO05D005747 4.4e-29 132.9 189 43.9
Nitab4.5_0000638g0250 Nicotiana tabacum HOM05D004801 ORTHO05D005747 7.5e-29 132.1 263 41.8
CAN.G578.5 Capsicum annuum HOM05D004801 ORTHO05D005747 1.3e-28 131.3 88 75.0
MSTRG.14326 Avicennia marina HOM05D004801 ORTHO05D005747 1.7e-28 131.0 218 39.4
arahy.Tifrunner.gnm1.ann1.KJ31KE Arachis hypogaea HOM05D004801 ORTHO05D005747 3.7e-28 129.8 278 46.8
AUR62022461 Chenopodium quinoa HOM05D004801 ORTHO05D005747 8.3e-28 128.6 276 37.0
Lalb_Chr14g0366971 Lupinus albus HOM05D004801 ORTHO05D005747 8.3e-28 128.6 265 39.2
Sopen07g027930 Solanum pennellii HOM05D004801 ORTHO05D005747 8.3e-28 128.6 91 70.3
Eucgr.A01822 Eucalyptus grandis HOM05D004801 ORTHO05D005747 1.4e-27 127.9 277 49.8
FAN02G2956 Fragaria x ananassa HOM05D004801 ORTHO05D005747 1.8e-27 127.5 73 79.5
FAN09G3815 Fragaria x ananassa HOM05D004801 ORTHO05D005747 1.8e-27 127.5 73 79.5
PGSC0003DMG400018341 Solanum tuberosum HOM05D004801 ORTHO05D005747 1.8e-27 127.5 91 70.3
Phvul.004G108200 Phaseolus vulgaris HOM05D004801 ORTHO05D005747 2.4e-27 127.1 265 37.4
Lsat_1_v5_gn_8_135941 Lactuca sativa HOM05D004801 ORTHO05D005747 5.4e-27 125.9 262 40.1
Aqoxy4G01981 Aquilegia oxysepala HOM05D004801 ORTHO05D005747 7.0e-27 125.6 82 70.7
Sabra13G0110300 Salix brachista HOM05D004801 ORTHO05D005747 7.0e-27 125.6 215 50.7
FvH4_6g26250 Fragaria vesca HOM05D004801 ORTHO05D005747 9.2e-27 125.2 90 66.7
Potri.013G130700 Populus trichocarpa HOM05D004801 ORTHO05D005747 9.2e-27 125.2 103 59.2
Solyc07g053950.1 Solanum lycopersicum HOM05D004801 ORTHO05D005747 2.0e-26 124.0 91 69.2
Cpa.g.sc34.170 Carica papaya HOM05D004801 ORTHO05D005747 2.7e-26 123.6 205 41.0
unitig_37.g12306 Utricularia gibba HOM05D004801 ORTHO05D005747 3.5e-26 123.2 226 41.2
SalBow1G6004 Salvia bowleyana HOM05D004801 ORTHO05D005747 4.5e-26 122.9 261 37.2
Ca_01496_v3 Cicer arietinum L. HOM05D004801 ORTHO05D005747 5.9e-26 122.5 266 37.2
MBI18_g28947_MAGBIO Magnolia biondii HOM05D004801 ORTHO05D005747 5.9e-26 122.5 249 37.3
SalBow1G1046 Salvia bowleyana HOM05D004801 ORTHO05D005747 5.9e-26 122.5 267 38.2
Lj1P721T18 Lonicera japonica HOM05D004801 ORTHO05D005747 2.5e-24 117.1 64 82.8
PGR042G3918 Punica granatum HOM05D004801 ORTHO05D005747 2.5e-24 117.1 277 47.7
Glyma.13G296800 Glycine max HOM05D004801 ORTHO05D005747 4.3e-24 116.3 107 53.3
Peaxi162Scf00132g00008 Petunia axillaris HOM05D004801 ORTHO05D005747 7.3e-24 115.5 237 40.9
Medtr2g090385 Medicago truncatula HOM05D004801 ORTHO05D005747 2.8e-23 113.6 262 42.4
BraA08t33972Z Brassica rapa HOM05D004801 ORTHO05D005747 6.1e-23 112.5 258 34.5
AT4G28310 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 1.4e-22 111.3 179 40.2
C01p24790 Brassica napus HOM05D004801 ORTHO05D005747 1.4e-22 111.3 96 57.3
A08p20130 Brassica napus HOM05D004801 ORTHO05D005747 1.8e-22 110.9 212 37.7
SEGI_29524 Sequoiadendron giganteum HOM05D004801 ORTHO05D005747 1.8e-22 110.9 96 53.1
CARHR236030 Cardamine hirsuta HOM05D004801 ORTHO05D005747 3.1e-22 110.2 188 38.3
Os06g0115700 Oryza sativa ssp. japonica HOM05D004801 ORTHO05D005747 3.1e-22 110.2 74 71.6
BcaC07g38324 Brassica carinata HOM05D004801 ORTHO05D005747 4.0e-22 109.8 200 38.0
C08p10790 Brassica napus HOM05D004801 ORTHO05D005747 4.0e-22 109.8 200 38.0
BraA01t01904Z Brassica rapa HOM05D004801 ORTHO05D005747 4.0e-22 109.8 76 64.5
Zm00001eb269130 Zea mays HOM05D004801 ORTHO05D005747 5.2e-22 109.4 92 60.9
BcaB03g12566 Brassica carinata HOM05D004801 ORTHO05D005747 6.8e-22 109.0 256 34.4
PSO357G0555 Papaver somniferum HOM05D004801 ORTHO05D005747 6.8e-22 109.0 319 40.8
BolC8t48753H Brassica oleracea HOM05D004801 ORTHO05D005747 8.9e-22 108.6 212 37.3
AL7G24290 Arabidopsis lyrata HOM05D004801 ORTHO05D005747 1.2e-21 108.2 77 63.6
Aa31LG2G22170 Aethionema arabicum HOM05D004801 ORTHO05D005747 1.5e-21 107.8 77 59.7
BolC1t02426H Brassica oleracea HOM05D004801 ORTHO05D005747 2.0e-21 107.5 203 42.9
BcaC09g50492 Brassica carinata HOM05D004801 ORTHO05D005747 2.6e-21 107.1 203 41.4
TPR.G6396 Trifolium pratense HOM05D004801 ORTHO05D005747 7.5e-21 105.5 266 36.5
BcaNung01577 Brassica carinata HOM05D004801 ORTHO05D005747 9.8e-21 105.1 208 34.6
Sp7g26270 Schrenkiella parvula HOM05D004801 ORTHO05D005747 9.8e-21 105.1 259 34.7
Psat5g272360 Pisum sativum HOM05D004801 ORTHO05D005747 1.3e-20 104.8 73 68.5
THA.LOC104824700 Tarenaya hassleriana HOM05D004801 ORTHO05D005747 1.3e-20 104.8 78 57.7
Mapoly0078s0017 Marchantia polymorpha HOM05D004801 ORTHO05D005747 2.2e-20 104.0 78 59.0
Psat5g270840 Pisum sativum HOM05D004801 ORTHO05D005747 2.9e-20 103.6 73 67.1
Aa31LG10G480 Aethionema arabicum HOM05D004801 ORTHO05D005747 4.9e-20 102.8 77 58.4
Thhalv10027270m.g Eutrema salsugineum HOM05D004801 ORTHO05D005747 4.9e-20 102.8 259 33.2
Carub.0007s1244 Capsella rubella HOM05D004801 ORTHO05D005747 8.3e-20 102.1 77 57.1
ATR0124G030 Amborella trichopoda HOM05D004801 ORTHO05D005747 1.9e-19 100.9 108 48.1
Pp3c17_13330 Physcomitrium patens HOM05D004801 ORTHO05D005747 7.0e-19 99.0 77 61.0
PSO170G5688 Papaver somniferum HOM05D004801 ORTHO05D005747 1.6e-18 97.8 323 38.1
BcaC06g32627 Brassica carinata HOM05D004801 ORTHO05D005747 1.3e-17 94.7 73 56.2
BcaC06g32628 Brassica carinata HOM05D004801 ORTHO05D005747 1.3e-17 94.7 73 56.2
Pp3c14_12710 Physcomitrium patens HOM05D004801 ORTHO05D005747 1.7e-17 94.4 77 55.8
A03p58010 Brassica napus HOM05D004801 ORTHO05D005747 5.6e-16 89.4 76 53.9
BraA03t14864Z Brassica rapa HOM05D004801 ORTHO05D005747 5.6e-16 89.4 76 53.9
AagrBONN_evm.TU.Sc2ySwM_344.3370 Anthoceros agrestis HOM05D004801 ORTHO05D005747 9.5e-16 88.6 78 56.4
C07p56130 Brassica napus HOM05D004801 ORTHO05D005747 8.0e-15 85.5 76 51.3
BolC7t46088H Brassica oleracea HOM05D004801 ORTHO05D005747 4.0e-14 83.2 76 51.3
SalBow7G4382 Salvia bowleyana HOM05D004801 ORTHO05D005747 2.9e-12 77.0 222 36.5
BcaNung01357 Brassica carinata HOM05D004801 ORTHO05D005747 8.6e-09 65.5 58 48.3
CSS0039100 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D004590 4.7e-07 59.7 53 67.9
SalBow7G4186 Salvia bowleyana HOM05D000074 ORTHO05D000220 8.1e-07 58.9 32 81.2
AT1G52270 Arabidopsis thaliana HOM05D004801 ORTHO05D005747 6.8e-06 55.8 60 45.0


User provided reference genes

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