Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23623 Davidia involucrata HOM05D005412 ORTHO05D006096 3.6e-45 184.5 90 100.0
Dinv23614 Davidia involucrata HOM05D005412 ORTHO05D006096 8.9e-44 179.9 90 96.7
Dinv23622 Davidia involucrata HOM05D005412 ORTHO05D006096 3.9e-39 164.5 82 100.0
Dinv23615 Davidia involucrata HOM05D005412 ORTHO05D006096 2.9e-34 148.3 72 100.0
Dinv42150 Davidia involucrata HOM05D005412 ORTHO05D006096 1.2e-27 126.3 67 89.6
Prupe.8G123400 Prunus persica HOM05D005412 ORTHO05D006096 1.5e-27 125.9 67 88.1
MD10G1093800 Malus domestica HOM05D005412 ORTHO05D006096 3.4e-27 124.8 67 86.6
Rhsim11G0166400 Rhododendron simsii HOM05D005412 ORTHO05D006096 3.4e-27 124.8 67 89.6
TAR376G0189 Trochodendron aralioides HOM05D005412 ORTHO05D006096 4.4e-27 124.4 67 89.6
Actinidia00447 Actinidia chinensis HOM05D005412 ORTHO05D006096 5.8e-27 124.0 67 88.1
Nn5g30243 Nelumbo nucifera HOM05D005412 ORTHO05D006096 7.5e-27 123.6 67 88.1
Cpa.g.sc62.21 Carica papaya HOM05D005412 ORTHO05D006096 9.9e-27 123.2 67 83.6
THA.LOC104800351 Tarenaya hassleriana HOM05D005412 ORTHO05D006096 9.9e-27 123.2 67 86.6
CiPaw.05G051900 Carya illinoinensis HOM05D005412 ORTHO05D006096 1.3e-26 122.9 67 86.6
MD05G1079500 Malus domestica HOM05D005412 ORTHO05D006096 1.3e-26 122.9 66 86.4
vmacro02202 Vaccinium macrocarpon HOM05D005412 ORTHO05D006096 1.3e-26 122.9 67 88.1
Peaxi162Scf00016g01825 Petunia axillaris HOM05D005412 ORTHO05D006096 1.7e-26 122.5 67 86.6
GSVIVG01031759001 Vitis vinifera HOM05D005412 ORTHO05D006096 1.7e-26 122.5 67 85.1
CAN.G1041.23 Capsicum annuum HOM05D005412 ORTHO05D006096 2.2e-26 122.1 67 85.1
CSS0011349 Camellia sinensis var. sinensis HOM05D005412 ORTHO05D006096 2.9e-26 121.7 67 88.1
TAR628G0752 Trochodendron aralioides HOM05D005412 ORTHO05D006096 2.9e-26 121.7 67 85.1
Lj9C358T17 Lonicera japonica HOM05D005412 ORTHO05D006096 3.7e-26 121.3 67 85.1
Nitab4.5_0003080g0090 Nicotiana tabacum HOM05D005412 ORTHO05D006096 3.7e-26 121.3 67 85.1
Nitab4.5_0003503g0010 Nicotiana tabacum HOM05D005412 ORTHO05D006096 3.7e-26 121.3 67 85.1
Ca_18676_v3 Cicer arietinum L. HOM05D005412 ORTHO05D006096 6.4e-26 120.6 67 82.1
Lalb_Chr09g0328271 Lupinus albus HOM05D005412 ORTHO05D006096 8.3e-26 120.2 67 82.1
RcHm_v2.0_Chr6g0256971 Rosa chinensis HOM05D005412 ORTHO05D006096 1.9e-25 119.0 65 84.6
TPR.G30829 Trifolium pratense HOM05D005412 ORTHO05D006096 1.9e-25 119.0 67 80.6
FvH4_2g06220 Fragaria vesca HOM05D005412 ORTHO05D006096 2.4e-25 118.6 65 84.6
FAN24G2004 Fragaria x ananassa HOM05D005412 ORTHO05D006096 2.4e-25 118.6 65 84.6
FAN27G2299 Fragaria x ananassa HOM05D005412 ORTHO05D006096 2.4e-25 118.6 65 84.6
FAN15G2385 Fragaria x ananassa HOM05D005412 ORTHO05D006096 5.4e-25 117.5 65 83.1
DCAR_022030 Daucus carota HOM05D005412 ORTHO05D006096 7.1e-25 117.1 67 83.6
FAN20G2783 Fragaria x ananassa HOM05D005412 ORTHO05D006096 7.1e-25 117.1 65 83.1
HanXRQChr03g0072341 Helianthus annuus HOM05D005412 ORTHO05D006096 9.2e-25 116.7 67 79.1
Psat7g124160 Pisum sativum HOM05D005412 ORTHO05D006096 9.2e-25 116.7 67 79.1
QL11p036050 Quercus lobata HOM05D005412 ORTHO05D006096 9.2e-25 116.7 67 79.1
ClCG05G010030 Citrullus lanatus HOM05D005412 ORTHO05D006096 1.2e-24 116.3 67 77.6
MELO3C019513.2 Cucumis melo HOM05D005412 ORTHO05D006096 1.2e-24 116.3 67 77.6
arahy.Tifrunner.gnm1.ann1.4LZP30 Arachis hypogaea HOM05D005412 ORTHO05D006096 1.6e-24 115.9 67 80.6
arahy.Tifrunner.gnm1.ann1.Q5Y61J Arachis hypogaea HOM05D005412 ORTHO05D006096 1.6e-24 115.9 67 80.6
Medtr4g086370 Medicago truncatula HOM05D005412 ORTHO05D006096 1.6e-24 115.9 67 77.6
Thecc.02G099500 Theobroma cacao HOM05D005412 ORTHO05D006096 1.6e-24 115.9 64 89.1
AT3G19190 Arabidopsis thaliana HOM05D005412 ORTHO05D006096 2.1e-24 115.5 67 82.1
CARHR094600 Cardamine hirsuta HOM05D005412 ORTHO05D006096 2.1e-24 115.5 67 82.1
HPP92_028322 Vanilla planifolia HOM05D005412 ORTHO05D006096 3.5e-24 114.8 67 80.6
Migut.B00339 Erythranthe guttata HOM05D005412 ORTHO05D006096 4.6e-24 114.4 67 79.1
Oeu025571.1 Olea europaea HOM05D005412 ORTHO05D006096 4.6e-24 114.4 79 74.7
Thhalv10019879m.g Eutrema salsugineum HOM05D005412 ORTHO05D006096 6.0e-24 114.0 67 80.6
Sp3g17260 Schrenkiella parvula HOM05D005412 ORTHO05D006096 6.0e-24 114.0 67 80.6
SGA_v2.0_scaffold90G27665 Striga asiatica HOM05D005412 ORTHO05D006096 6.0e-24 114.0 67 79.1
COL.COLO4_32667 Corchorus olitorius HOM05D005412 ORTHO05D006096 1.0e-23 113.2 64 87.5
Phvul.003G295800 Phaseolus vulgaris HOM05D005412 ORTHO05D006096 1.0e-23 113.2 68 79.4
TWI75G0165 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 1.0e-23 113.2 67 76.1
VMungo0251G1021 Vigna mungo HOM05D005412 ORTHO05D006096 1.0e-23 113.2 68 79.4
Cc02_g18700 Coffea canephora HOM05D005412 ORTHO05D006096 1.3e-23 112.8 67 77.6
Eucgr.I01159 Eucalyptus grandis HOM05D005412 ORTHO05D006096 1.3e-23 112.8 65 80.0
Manes.10G065500 Manihot esculenta HOM05D005412 ORTHO05D006096 1.3e-23 112.8 67 76.1
Sc14g0001650 Simmondsia chinensis HOM05D005412 ORTHO05D006096 1.3e-23 112.8 67 80.6
Aa31LG8G5990 Aethionema arabicum HOM05D005412 ORTHO05D006096 1.7e-23 112.5 67 79.1
AL3G32570 Arabidopsis lyrata HOM05D005412 ORTHO05D006096 1.7e-23 112.5 67 79.1
Sabra09G0078800 Salix brachista HOM05D005412 ORTHO05D006096 3.0e-23 111.7 67 77.6
Sed0007905 Sechium edule HOM05D005412 ORTHO05D006096 3.0e-23 111.7 67 74.6
Lj4g0027932 Lotus japonicus HOM05D005412 ORTHO05D006096 3.9e-23 111.3 65 80.0
Potri.009G102900 Populus trichocarpa HOM05D005412 ORTHO05D006096 3.9e-23 111.3 67 77.6
Glyma.07G211600 Glycine max HOM05D005412 ORTHO05D006096 6.6e-23 110.5 68 77.9
Ah.02g117120 Amaranthus hybridus HOM05D005412 ORTHO05D006096 8.6e-23 110.2 70 74.3
Duzib052G1101 Durio zibethinus HOM05D005412 ORTHO05D006096 8.6e-23 110.2 64 84.4
Gorai.005G238500 Gossypium raimondii HOM05D005412 ORTHO05D006096 8.6e-23 110.2 64 84.4
Atru.chr5.2730 Acer truncatum HOM05D005412 ORTHO05D006096 1.1e-22 109.8 65 75.4
Duzib248G0232 Durio zibethinus HOM05D005412 ORTHO05D006096 1.1e-22 109.8 64 84.4
Glyma.02G133400 Glycine max HOM05D005412 ORTHO05D006096 1.1e-22 109.8 68 77.9
Ciclev10027665m.g Citrus clementina HOM05D005412 ORTHO05D006096 1.5e-22 109.4 65 76.9
TWI79G0096 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 1.5e-22 109.4 68 75.0
Haze_01830 Corylus avellana HOM05D005412 ORTHO05D006096 1.9e-22 109.0 67 73.1
Sabra04G0093700 Salix brachista HOM05D005412 ORTHO05D006096 1.9e-22 109.0 67 77.6
EL10Ac9g21835 Beta vulgaris HOM05D005412 ORTHO05D006096 2.5e-22 108.6 70 74.3
Solyc01g108160.3 Solanum lycopersicum HOM05D005412 ORTHO05D006096 2.5e-22 108.6 65 80.0
Potri.004G141700 Populus trichocarpa HOM05D005412 ORTHO05D006096 3.3e-22 108.2 67 76.1
BcaB06g25975 Brassica carinata HOM05D005412 ORTHO05D006096 4.3e-22 107.8 67 79.1
BcaNung06981 Brassica carinata HOM05D005412 ORTHO05D006096 4.3e-22 107.8 67 79.1
A05p30450 Brassica napus HOM05D005412 ORTHO05D006096 4.3e-22 107.8 67 79.1
C05p46050 Brassica napus HOM05D005412 ORTHO05D006096 4.3e-22 107.8 67 79.1
BolC5t33332H Brassica oleracea HOM05D005412 ORTHO05D006096 4.3e-22 107.8 67 79.1
BraA05t21884Z Brassica rapa HOM05D005412 ORTHO05D006096 4.3e-22 107.8 67 79.1
AUR62011444 Chenopodium quinoa HOM05D005412 ORTHO05D006096 5.6e-22 107.5 67 76.1
AUR62016618 Chenopodium quinoa HOM05D005412 ORTHO05D006096 5.6e-22 107.5 67 76.1
Sopen01g050390 Solanum pennellii HOM05D005412 ORTHO05D006096 7.3e-22 107.1 65 78.5
Carub.0003s1902 Capsella rubella HOM05D005412 ORTHO05D006096 9.5e-22 106.7 68 77.9
PGSC0003DMG400025793 Solanum tuberosum HOM05D005412 ORTHO05D006096 1.2e-21 106.3 65 78.5
CsaV3_3G018530 Cucumis sativus L. HOM05D005412 ORTHO05D006096 3.6e-21 104.8 61 75.4
unitig_21.g20750 Utricularia gibba HOM05D005412 ORTHO05D006096 3.6e-21 104.8 67 73.1
PSO210G3961 Papaver somniferum HOM05D005412 ORTHO05D006096 4.7e-21 104.4 67 71.6
PSO170G0229 Papaver somniferum HOM05D005412 ORTHO05D006096 1.4e-20 102.8 67 71.6
CDE02G1280 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 2.4e-20 102.1 72 65.3
Lsat_1_v5_gn_9_110121 Lactuca sativa HOM05D005412 ORTHO05D006096 2.4e-20 102.1 64 76.6
CDE09G1352 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 4.0e-20 101.3 67 68.7
CiPaw.06G143300 Carya illinoinensis HOM05D005412 ORTHO05D006096 2.6e-19 98.6 56 83.9
Hund00331 Selenicereus undatus HOM05D005412 ORTHO05D006096 4.4e-19 97.8 64 70.3
MBI02_g17325_MAGBIO Magnolia biondii HOM05D005412 ORTHO05D006096 5.8e-19 97.4 56 80.4
Oeu003689.1 Olea europaea HOM05D005412 ORTHO05D006096 5.8e-19 97.4 68 75.0
SHI05374 Sapria himalayana HOM05D005412 ORTHO05D006096 2.4e-17 92.0 67 62.7
BcaNung06609 Brassica carinata HOM05D005412 ORTHO05D006096 1.6e-16 89.4 55 80.0
Aqoxy5G01253 Aquilegia oxysepala HOM05D005412 ORTHO05D006096 9.6e-14 80.1 69 52.2
ATR0100G063 Amborella trichopoda HOM05D005412 ORTHO05D006096 1.5e-11 72.8 67 50.7
Zm00001eb280540 Zea mays HOM05D005412 ORTHO05D006096 2.0e-11 72.4 50 62.0
Mapoly0038s0067 Marchantia polymorpha HOM05D005412 ORTHO05D006096 7.6e-11 70.5 56 57.1
AagrBONN_evm.TU.Sc2ySwM_369.474 Anthoceros agrestis HOM05D005412 ORTHO05D006096 8.4e-10 67.0 57 49.1
CBR_g37914 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-09 66.2 56 53.6
Pp3c13_15610 Physcomitrium patens HOM05D005412 ORTHO05D006096 3.2e-09 65.1 56 50.0
SEGI_28745 Sequoiadendron giganteum HOM05D005412 ORTHO05D006096 3.2e-09 65.1 52 61.5
Cre09.g408950 Chlamydomonas reinhardtii HOM05D005412 ORTHO05D006096 1.5e-06 56.2 53 43.4
MCO03G368 Micromonas commoda HOM05D005412 ORTHO05D006096 4.3e-06 54.7 52 44.2


User provided reference genes

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