Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23622 Davidia involucrata HOM05D005412 ORTHO05D006096 6.9e-90 334.0 168 100.0
Dinv23623 Davidia involucrata HOM05D005412 ORTHO05D006096 1.2e-38 163.7 82 100.0
Dinv23614 Davidia involucrata HOM05D005412 ORTHO05D006096 3.0e-37 159.1 82 96.3
Dinv23615 Davidia involucrata HOM05D005412 ORTHO05D006096 9.8e-28 127.5 64 100.0
Dinv42150 Davidia involucrata HOM05D005412 ORTHO05D006096 2.2e-24 116.3 64 89.1
Prupe.8G123400 Prunus persica HOM05D005412 ORTHO05D006096 2.9e-24 115.9 64 87.5
Thecc.02G099500 Theobroma cacao HOM05D005412 ORTHO05D006096 5.0e-24 115.2 64 89.1
CSS0011349 Camellia sinensis var. sinensis HOM05D005412 ORTHO05D006096 6.5e-24 114.8 64 89.1
MD10G1093800 Malus domestica HOM05D005412 ORTHO05D006096 6.5e-24 114.8 64 85.9
Rhsim11G0166400 Rhododendron simsii HOM05D005412 ORTHO05D006096 6.5e-24 114.8 64 89.1
TAR376G0189 Trochodendron aralioides HOM05D005412 ORTHO05D006096 8.5e-24 114.4 64 89.1
Actinidia00447 Actinidia chinensis HOM05D005412 ORTHO05D006096 1.1e-23 114.0 64 87.5
RcHm_v2.0_Chr6g0256971 Rosa chinensis HOM05D005412 ORTHO05D006096 1.1e-23 114.0 64 84.4
FvH4_2g06220 Fragaria vesca HOM05D005412 ORTHO05D006096 1.5e-23 113.6 64 84.4
FAN24G2004 Fragaria x ananassa HOM05D005412 ORTHO05D006096 1.5e-23 113.6 64 84.4
FAN27G2299 Fragaria x ananassa HOM05D005412 ORTHO05D006096 1.5e-23 113.6 64 84.4
Nn5g30243 Nelumbo nucifera HOM05D005412 ORTHO05D006096 1.5e-23 113.6 64 87.5
Cpa.g.sc62.21 Carica papaya HOM05D005412 ORTHO05D006096 1.9e-23 113.2 64 82.8
THA.LOC104800351 Tarenaya hassleriana HOM05D005412 ORTHO05D006096 1.9e-23 113.2 64 85.9
CiPaw.05G051900 Carya illinoinensis HOM05D005412 ORTHO05D006096 2.5e-23 112.8 64 85.9
vmacro02202 Vaccinium macrocarpon HOM05D005412 ORTHO05D006096 2.5e-23 112.8 64 87.5
COL.COLO4_32667 Corchorus olitorius HOM05D005412 ORTHO05D006096 3.2e-23 112.5 64 87.5
FAN15G2385 Fragaria x ananassa HOM05D005412 ORTHO05D006096 3.2e-23 112.5 64 82.8
MD05G1079500 Malus domestica HOM05D005412 ORTHO05D006096 3.2e-23 112.5 63 85.7
Peaxi162Scf00016g01825 Petunia axillaris HOM05D005412 ORTHO05D006096 3.2e-23 112.5 64 85.9
GSVIVG01031759001 Vitis vinifera HOM05D005412 ORTHO05D006096 3.2e-23 112.5 64 84.4
CAN.G1041.23 Capsicum annuum HOM05D005412 ORTHO05D006096 4.2e-23 112.1 64 84.4
FAN20G2783 Fragaria x ananassa HOM05D005412 ORTHO05D006096 4.2e-23 112.1 64 82.8
TAR628G0752 Trochodendron aralioides HOM05D005412 ORTHO05D006096 5.5e-23 111.7 64 84.4
Lj9C358T17 Lonicera japonica HOM05D005412 ORTHO05D006096 7.2e-23 111.3 64 84.4
Nitab4.5_0003080g0090 Nicotiana tabacum HOM05D005412 ORTHO05D006096 7.2e-23 111.3 64 84.4
Nitab4.5_0003503g0010 Nicotiana tabacum HOM05D005412 ORTHO05D006096 7.2e-23 111.3 64 84.4
Ca_18676_v3 Cicer arietinum L. HOM05D005412 ORTHO05D006096 1.2e-22 110.5 64 81.2
DCAR_022030 Daucus carota HOM05D005412 ORTHO05D006096 1.2e-22 110.5 66 83.3
Lalb_Chr09g0328271 Lupinus albus HOM05D005412 ORTHO05D006096 1.6e-22 110.2 64 81.2
Duzib052G1101 Durio zibethinus HOM05D005412 ORTHO05D006096 2.7e-22 109.4 64 84.4
Gorai.005G238500 Gossypium raimondii HOM05D005412 ORTHO05D006096 2.7e-22 109.4 64 84.4
Duzib248G0232 Durio zibethinus HOM05D005412 ORTHO05D006096 3.6e-22 109.0 64 84.4
TPR.G30829 Trifolium pratense HOM05D005412 ORTHO05D006096 3.6e-22 109.0 64 79.7
HPP92_028322 Vanilla planifolia HOM05D005412 ORTHO05D006096 6.1e-22 108.2 64 81.2
Migut.B00339 Erythranthe guttata HOM05D005412 ORTHO05D006096 8.0e-22 107.8 66 78.8
Eucgr.I01159 Eucalyptus grandis HOM05D005412 ORTHO05D006096 8.0e-22 107.8 63 81.0
Phvul.003G295800 Phaseolus vulgaris HOM05D005412 ORTHO05D006096 8.0e-22 107.8 64 79.7
VMungo0251G1021 Vigna mungo HOM05D005412 ORTHO05D006096 8.0e-22 107.8 64 79.7
Glyma.02G133400 Glycine max HOM05D005412 ORTHO05D006096 1.0e-21 107.5 64 79.7
Oeu025571.1 Olea europaea HOM05D005412 ORTHO05D006096 1.0e-21 107.5 76 75.0
SGA_v2.0_scaffold90G27665 Striga asiatica HOM05D005412 ORTHO05D006096 1.0e-21 107.5 66 78.8
HanXRQChr03g0072341 Helianthus annuus HOM05D005412 ORTHO05D006096 1.8e-21 106.7 64 78.1
Psat7g124160 Pisum sativum HOM05D005412 ORTHO05D006096 1.8e-21 106.7 63 79.4
QL11p036050 Quercus lobata HOM05D005412 ORTHO05D006096 1.8e-21 106.7 64 78.1
ClCG05G010030 Citrullus lanatus HOM05D005412 ORTHO05D006096 2.3e-21 106.3 64 76.6
Cc02_g18700 Coffea canephora HOM05D005412 ORTHO05D006096 2.3e-21 106.3 66 77.3
MELO3C019513.2 Cucumis melo HOM05D005412 ORTHO05D006096 2.3e-21 106.3 64 76.6
Lj4g0027932 Lotus japonicus HOM05D005412 ORTHO05D006096 2.3e-21 106.3 64 79.7
Manes.10G065500 Manihot esculenta HOM05D005412 ORTHO05D006096 2.3e-21 106.3 66 75.8
arahy.Tifrunner.gnm1.ann1.4LZP30 Arachis hypogaea HOM05D005412 ORTHO05D006096 3.0e-21 105.9 64 79.7
arahy.Tifrunner.gnm1.ann1.Q5Y61J Arachis hypogaea HOM05D005412 ORTHO05D006096 3.0e-21 105.9 64 79.7
Medtr4g086370 Medicago truncatula HOM05D005412 ORTHO05D006096 3.0e-21 105.9 64 76.6
AT3G19190 Arabidopsis thaliana HOM05D005412 ORTHO05D006096 4.0e-21 105.5 64 81.2
CARHR094600 Cardamine hirsuta HOM05D005412 ORTHO05D006096 4.0e-21 105.5 64 81.2
Glyma.07G211600 Glycine max HOM05D005412 ORTHO05D006096 5.2e-21 105.1 62 80.6
Sabra09G0078800 Salix brachista HOM05D005412 ORTHO05D006096 5.2e-21 105.1 66 77.3
Atru.chr5.2730 Acer truncatum HOM05D005412 ORTHO05D006096 6.8e-21 104.8 62 77.4
Potri.009G102900 Populus trichocarpa HOM05D005412 ORTHO05D006096 6.8e-21 104.8 66 77.3
Sed0007905 Sechium edule HOM05D005412 ORTHO05D006096 6.8e-21 104.8 64 75.0
Carub.0003s1902 Capsella rubella HOM05D005412 ORTHO05D006096 8.8e-21 104.4 64 79.7
Ciclev10027665m.g Citrus clementina HOM05D005412 ORTHO05D006096 8.8e-21 104.4 63 77.8
Thhalv10019879m.g Eutrema salsugineum HOM05D005412 ORTHO05D006096 1.2e-20 104.0 64 79.7
Sp3g17260 Schrenkiella parvula HOM05D005412 ORTHO05D006096 1.2e-20 104.0 64 79.7
Solyc01g108160.3 Solanum lycopersicum HOM05D005412 ORTHO05D006096 1.5e-20 103.6 64 79.7
TWI75G0165 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 2.0e-20 103.2 63 76.2
Sc14g0001650 Simmondsia chinensis HOM05D005412 ORTHO05D006096 2.6e-20 102.8 63 81.0
TWI79G0096 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 2.6e-20 102.8 67 74.6
Aa31LG8G5990 Aethionema arabicum HOM05D005412 ORTHO05D006096 3.4e-20 102.4 63 79.4
AL3G32570 Arabidopsis lyrata HOM05D005412 ORTHO05D006096 3.4e-20 102.4 64 78.1
EL10Ac9g21835 Beta vulgaris HOM05D005412 ORTHO05D006096 3.4e-20 102.4 69 73.9
Haze_01830 Corylus avellana HOM05D005412 ORTHO05D006096 3.4e-20 102.4 66 72.7
Sabra04G0093700 Salix brachista HOM05D005412 ORTHO05D006096 3.4e-20 102.4 66 77.3
Sopen01g050390 Solanum pennellii HOM05D005412 ORTHO05D006096 4.4e-20 102.1 64 78.1
Potri.004G141700 Populus trichocarpa HOM05D005412 ORTHO05D006096 5.7e-20 101.7 66 75.8
Lsat_1_v5_gn_9_110121 Lactuca sativa HOM05D005412 ORTHO05D006096 7.5e-20 101.3 64 76.6
PGSC0003DMG400025793 Solanum tuberosum HOM05D005412 ORTHO05D006096 7.5e-20 101.3 62 80.6
BcaB06g25975 Brassica carinata HOM05D005412 ORTHO05D006096 9.8e-20 100.9 59 83.1
BcaNung06981 Brassica carinata HOM05D005412 ORTHO05D006096 9.8e-20 100.9 59 83.1
A05p30450 Brassica napus HOM05D005412 ORTHO05D006096 9.8e-20 100.9 59 83.1
C05p46050 Brassica napus HOM05D005412 ORTHO05D006096 9.8e-20 100.9 59 83.1
BolC5t33332H Brassica oleracea HOM05D005412 ORTHO05D006096 9.8e-20 100.9 59 83.1
BraA05t21884Z Brassica rapa HOM05D005412 ORTHO05D006096 9.8e-20 100.9 59 83.1
AUR62011444 Chenopodium quinoa HOM05D005412 ORTHO05D006096 9.8e-20 100.9 66 75.8
AUR62016618 Chenopodium quinoa HOM05D005412 ORTHO05D006096 9.8e-20 100.9 66 75.8
Ah.02g117120 Amaranthus hybridus HOM05D005412 ORTHO05D006096 1.7e-19 100.1 67 73.1
CiPaw.06G143300 Carya illinoinensis HOM05D005412 ORTHO05D006096 4.9e-19 98.6 56 83.9
unitig_21.g20750 Utricularia gibba HOM05D005412 ORTHO05D006096 6.3e-19 98.2 66 72.7
Hund00331 Selenicereus undatus HOM05D005412 ORTHO05D006096 8.3e-19 97.8 72 63.9
MBI02_g17325_MAGBIO Magnolia biondii HOM05D005412 ORTHO05D006096 1.1e-18 97.4 56 80.4
Oeu003689.1 Olea europaea HOM05D005412 ORTHO05D006096 1.4e-18 97.1 68 75.0
CDE02G1280 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 4.1e-18 95.5 71 64.8
PSO210G3961 Papaver somniferum HOM05D005412 ORTHO05D006096 5.4e-18 95.1 63 71.4
CDE09G1352 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 7.0e-18 94.7 66 68.2
CsaV3_3G018530 Cucumis sativus L. HOM05D005412 ORTHO05D006096 7.0e-18 94.7 58 74.1
PSO170G0229 Papaver somniferum HOM05D005412 ORTHO05D006096 1.6e-17 93.6 63 71.4
BcaNung06609 Brassica carinata HOM05D005412 ORTHO05D006096 2.8e-14 82.8 47 85.1
SHI05374 Sapria himalayana HOM05D005412 ORTHO05D006096 4.7e-14 82.0 64 60.9
Zm00001eb280540 Zea mays HOM05D005412 ORTHO05D006096 3.7e-11 72.4 50 62.0
Aqoxy5G01253 Aquilegia oxysepala HOM05D005412 ORTHO05D006096 1.1e-10 70.9 58 53.4
Mapoly0038s0067 Marchantia polymorpha HOM05D005412 ORTHO05D006096 1.4e-10 70.5 56 57.1
AagrBONN_evm.TU.Sc2ySwM_369.474 Anthoceros agrestis HOM05D005412 ORTHO05D006096 1.6e-09 67.0 57 49.1
CBR_g37914 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-09 66.2 56 53.6
Pp3c13_15610 Physcomitrium patens HOM05D005412 ORTHO05D006096 5.9e-09 65.1 56 50.0
SEGI_28745 Sequoiadendron giganteum HOM05D005412 ORTHO05D006096 5.9e-09 65.1 52 61.5
ATR0100G063 Amborella trichopoda HOM05D005412 ORTHO05D006096 1.0e-08 64.3 57 54.4
Cre09.g408950 Chlamydomonas reinhardtii HOM05D005412 ORTHO05D006096 2.8e-06 56.2 53 43.4
MCO03G368 Micromonas commoda HOM05D005412 ORTHO05D006096 8.0e-06 54.7 52 44.2


User provided reference genes

Program Settings