Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23621 Davidia involucrata HOM05D011742 ORTHO05D014450 1.4e-57 226.1 115 100.0
Dinv15711 Davidia involucrata HOM05D002571 ORTHO05D002868 6.4e-39 164.1 99 86.9
Dinv23570 Davidia involucrata HOM05D002571 ORTHO05D002868 7.4e-27 124.0 100 67.0
Dinv23612 Davidia involucrata HOM05D002571 ORTHO05D002868 4.1e-25 118.2 90 70.0
Gohir.D12G210700 Gossypium hirsutum HOM05D002571 ORTHO05D002868 3.3e-11 72.0 81 48.1
Gorai.008G226200 Gossypium raimondii HOM05D002571 ORTHO05D002868 3.3e-11 72.0 81 48.1
PSO063G0454 Papaver somniferum HOM05D002571 ORTHO05D002868 5.7e-11 71.2 84 48.8
HanXRQChr03g0084261 Helianthus annuus HOM05D002571 ORTHO05D002868 9.7e-11 70.5 76 53.9
Sc01g0007410 Simmondsia chinensis HOM05D002571 ORTHO05D002868 9.7e-11 70.5 76 51.3
Gohir.A12G208100 Gossypium hirsutum HOM05D002571 ORTHO05D002868 2.2e-10 69.3 60 58.3
HanXRQChr13g0414101 Helianthus annuus HOM05D002571 ORTHO05D002868 1.1e-09 67.0 76 51.3
Dinv25217 Davidia involucrata HOM05D002571 ORTHO05D002868 2.4e-09 65.9 90 43.3
arahy.Tifrunner.gnm1.ann1.Q13343 Arachis hypogaea HOM05D011742 ORTHO05D014450 6.9e-09 64.3 51 64.7
arahy.Tifrunner.gnm1.ann1.S5VH0G Arachis hypogaea HOM05D011742 ORTHO05D014450 6.9e-09 64.3 51 64.7
Nn1g08037 Nelumbo nucifera HOM05D002571 ORTHO05D002868 1.2e-08 63.5 49 69.4
Aqoxy3G02344 Aquilegia oxysepala HOM05D002571 ORTHO05D002868 4.5e-08 61.6 57 57.9
Migut.A01010 Erythranthe guttata HOM05D002571 ORTHO05D002868 5.9e-08 61.2 47 66.0
Lj2C239G12 Lonicera japonica HOM05D002571 ORTHO05D002868 5.9e-08 61.2 53 60.4
arahy.Tifrunner.gnm1.ann1.77GXGK Arachis hypogaea HOM05D011742 ORTHO05D014450 7.7e-08 60.8 67 53.7
ECA248G0576 Erigeron canadensis HOM05D002571 ORTHO05D002868 7.7e-08 60.8 60 56.7
arahy.Tifrunner.gnm1.ann1.YY1YYX Arachis hypogaea HOM05D011742 ORTHO05D014450 1.0e-07 60.5 72 52.8
BcaC07g38105 Brassica carinata HOM05D002571 ORTHO05D002868 1.0e-07 60.5 61 52.5
BolC8t48527H Brassica oleracea HOM05D002571 ORTHO05D002868 1.0e-07 60.5 61 52.5
Prupe.5G035300 Prunus persica HOM05D002571 ORTHO05D002868 1.7e-07 59.7 57 56.1
Cc08_g02810 Coffea canephora HOM05D002571 ORTHO05D002868 2.2e-07 59.3 45 68.9
MD06G1034600 Malus domestica HOM05D002571 ORTHO05D002868 3.8e-07 58.5 57 54.4
Mapoly0001s0506 Marchantia polymorpha HOM05D002571 ORTHO05D014450 3.8e-07 58.5 55 54.5
Mapoly0063s0097 Marchantia polymorpha HOM05D002571 ORTHO05D002868 3.8e-07 58.5 70 45.7
CiPaw.11G093700 Carya illinoinensis HOM05D002571 ORTHO05D002868 5.0e-07 58.2 43 69.8
Hma1.2p1_1794F.1_g302660 Hydrangea macrophylla HOM05D002571 ORTHO05D002868 6.5e-07 57.8 79 44.3
Nn6g33584 Nelumbo nucifera HOM05D002571 ORTHO05D002868 6.5e-07 57.8 42 71.4
Sabra01G0110500 Salix brachista HOM05D002571 ORTHO05D002868 6.5e-07 57.8 84 51.2
RcHm_v2.0_Chr7g0209771 Rosa chinensis HOM05D002571 ORTHO05D002868 8.5e-07 57.4 57 54.4
FvH4_5g22130 Fragaria vesca HOM05D002571 ORTHO05D002868 1.4e-06 56.6 56 55.4
FAN08G0866 Fragaria x ananassa HOM05D002571 ORTHO05D002868 1.4e-06 56.6 56 55.4
FAN13G2715 Fragaria x ananassa HOM05D002571 ORTHO05D002868 1.4e-06 56.6 56 55.4
Hund14396 Selenicereus undatus HOM05D002571 ORTHO05D002868 1.4e-06 56.6 43 69.8
THA.LOC104806707 Tarenaya hassleriana HOM05D002571 ORTHO05D002868 1.4e-06 56.6 59 45.8
arahy.Tifrunner.gnm1.ann1.JXDN17 Arachis hypogaea HOM05D002571 ORTHO05D014450 1.9e-06 56.2 46 60.9
Cpa.g.sc90.50 Carica papaya HOM05D002571 ORTHO05D002868 2.5e-06 55.8 80 40.0
SGA_v2.0_scaffold36G14313 Striga asiatica HOM05D002571 ORTHO05D002868 2.5e-06 55.8 40 70.0
Cfa012442 Carpinus fangiana HOM05D002571 ORTHO05D002868 3.2e-06 55.5 39 74.4
FAN04G1146 Fragaria x ananassa HOM05D002571 ORTHO05D002868 3.2e-06 55.5 56 55.4
SGA_v2.0_scaffold198G41099 Striga asiatica HOM05D002571 ORTHO05D002868 3.2e-06 55.5 40 67.5
Aa31LG6G620 Aethionema arabicum HOM05D002571 ORTHO05D002868 4.2e-06 55.1 57 45.6
BcaC06g34351 Brassica carinata HOM05D002571 ORTHO05D002868 4.2e-06 55.1 57 47.4
C07p30050 Brassica napus HOM05D002571 ORTHO05D002868 4.2e-06 55.1 57 47.4
BolC7t43545H Brassica oleracea HOM05D002571 ORTHO05D002868 4.2e-06 55.1 57 47.4
AL8G11590 Arabidopsis lyrata HOM05D002571 ORTHO05D002868 5.5e-06 54.7 57 45.6
EL10Ac5g12116 Beta vulgaris HOM05D002571 ORTHO05D002868 5.5e-06 54.7 57 49.1
BcaB06g28807 Brassica carinata HOM05D002571 ORTHO05D002868 5.5e-06 54.7 81 39.5
BcaB06g28831 Brassica carinata HOM05D001747 ORTHO05D001696 5.5e-06 54.7 44 56.8
FAN18G0316 Fragaria x ananassa HOM05D002571 ORTHO05D002868 5.5e-06 54.7 55 54.5
Gohir.A11G030600 Gossypium hirsutum HOM05D002571 ORTHO05D002868 5.5e-06 54.7 57 52.6
Gohir.D11G029300 Gossypium hirsutum HOM05D002571 ORTHO05D002868 5.5e-06 54.7 57 52.6
Gorai.007G031900 Gossypium raimondii HOM05D002571 ORTHO05D002868 5.5e-06 54.7 57 52.6
TAR374G1691 Trochodendron aralioides HOM05D002571 ORTHO05D002868 5.5e-06 54.7 48 60.4
BcaC06g31450 Brassica carinata HOM05D002571 ORTHO05D002868 7.2e-06 54.3 57 47.4
A04p26760 Brassica napus HOM05D002571 ORTHO05D002868 7.2e-06 54.3 42 64.3
C04p64160 Brassica napus HOM05D002571 ORTHO05D002868 7.2e-06 54.3 42 64.3
AUR62007295 Chenopodium quinoa HOM05D002571 ORTHO05D002868 7.2e-06 54.3 57 52.6
AUR62018710 Chenopodium quinoa HOM05D002571 ORTHO05D002868 7.2e-06 54.3 57 52.6
THA.LOC104807947 Tarenaya hassleriana HOM05D002571 ORTHO05D002868 7.2e-06 54.3 51 54.9
AT5G46750 Arabidopsis thaliana HOM05D002571 ORTHO05D002868 9.4e-06 53.9 57 45.6
BraA04t18180Z Brassica rapa HOM05D002571 ORTHO05D002868 9.4e-06 53.9 39 66.7
COL.COLO4_17028 Corchorus olitorius HOM05D002571 ORTHO05D002868 9.4e-06 53.9 57 50.9
Hund11235 Selenicereus undatus HOM05D002571 ORTHO05D002868 9.4e-06 53.9 43 65.1
TAR636G2406 Trochodendron aralioides HOM05D002571 ORTHO05D002868 9.4e-06 53.9 42 66.7


User provided reference genes

Program Settings