Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23614 Davidia involucrata HOM05D005412 ORTHO05D006096 4.7e-45 184.1 90 100.0
Dinv23623 Davidia involucrata HOM05D005412 ORTHO05D006096 8.9e-44 179.9 90 96.7
Dinv23622 Davidia involucrata HOM05D005412 ORTHO05D006096 9.5e-38 159.8 82 96.3
Dinv23615 Davidia involucrata HOM05D005412 ORTHO05D006096 7.0e-33 143.7 72 95.8
Dinv42150 Davidia involucrata HOM05D005412 ORTHO05D006096 3.4e-27 124.8 67 88.1
Prupe.8G123400 Prunus persica HOM05D005412 ORTHO05D006096 4.4e-27 124.4 67 86.6
THA.LOC104800351 Tarenaya hassleriana HOM05D005412 ORTHO05D006096 5.8e-27 124.0 67 86.6
Cpa.g.sc62.21 Carica papaya HOM05D005412 ORTHO05D006096 9.9e-27 123.2 67 83.6
MD10G1093800 Malus domestica HOM05D005412 ORTHO05D006096 9.9e-27 123.2 67 85.1
Rhsim11G0166400 Rhododendron simsii HOM05D005412 ORTHO05D006096 9.9e-27 123.2 67 88.1
TAR376G0189 Trochodendron aralioides HOM05D005412 ORTHO05D006096 1.3e-26 122.9 67 88.1
Actinidia00447 Actinidia chinensis HOM05D005412 ORTHO05D006096 1.7e-26 122.5 67 86.6
Nn5g30243 Nelumbo nucifera HOM05D005412 ORTHO05D006096 2.2e-26 122.1 67 86.6
TAR628G0752 Trochodendron aralioides HOM05D005412 ORTHO05D006096 2.9e-26 121.7 67 85.1
CiPaw.05G051900 Carya illinoinensis HOM05D005412 ORTHO05D006096 3.7e-26 121.3 67 85.1
MD05G1079500 Malus domestica HOM05D005412 ORTHO05D006096 3.7e-26 121.3 66 84.8
vmacro02202 Vaccinium macrocarpon HOM05D005412 ORTHO05D006096 3.7e-26 121.3 67 86.6
CAN.G1041.23 Capsicum annuum HOM05D005412 ORTHO05D006096 4.9e-26 120.9 67 83.6
GSVIVG01031759001 Vitis vinifera HOM05D005412 ORTHO05D006096 4.9e-26 120.9 67 83.6
CSS0011349 Camellia sinensis var. sinensis HOM05D005412 ORTHO05D006096 8.3e-26 120.2 67 86.6
Lalb_Chr09g0328271 Lupinus albus HOM05D005412 ORTHO05D006096 8.3e-26 120.2 67 82.1
Nitab4.5_0003080g0090 Nicotiana tabacum HOM05D005412 ORTHO05D006096 8.3e-26 120.2 67 83.6
Nitab4.5_0003503g0010 Nicotiana tabacum HOM05D005412 ORTHO05D006096 8.3e-26 120.2 67 83.6
Lj9C358T17 Lonicera japonica HOM05D005412 ORTHO05D006096 1.1e-25 119.8 67 83.6
Peaxi162Scf00016g01825 Petunia axillaris HOM05D005412 ORTHO05D006096 1.1e-25 119.8 67 83.6
Ca_18676_v3 Cicer arietinum L. HOM05D005412 ORTHO05D006096 1.9e-25 119.0 67 80.6
HanXRQChr03g0072341 Helianthus annuus HOM05D005412 ORTHO05D006096 4.1e-25 117.9 67 80.6
RcHm_v2.0_Chr6g0256971 Rosa chinensis HOM05D005412 ORTHO05D006096 5.4e-25 117.5 65 83.1
TPR.G30829 Trifolium pratense HOM05D005412 ORTHO05D006096 5.4e-25 117.5 67 79.1
FvH4_2g06220 Fragaria vesca HOM05D005412 ORTHO05D006096 7.1e-25 117.1 65 83.1
FAN24G2004 Fragaria x ananassa HOM05D005412 ORTHO05D006096 7.1e-25 117.1 65 83.1
FAN27G2299 Fragaria x ananassa HOM05D005412 ORTHO05D006096 7.1e-25 117.1 65 83.1
Medtr4g086370 Medicago truncatula HOM05D005412 ORTHO05D006096 9.2e-25 116.7 67 77.6
Thecc.02G099500 Theobroma cacao HOM05D005412 ORTHO05D006096 9.2e-25 116.7 64 89.1
QL11p036050 Quercus lobata HOM05D005412 ORTHO05D006096 1.2e-24 116.3 67 77.6
FAN15G2385 Fragaria x ananassa HOM05D005412 ORTHO05D006096 1.6e-24 115.9 65 81.5
AT3G19190 Arabidopsis thaliana HOM05D005412 ORTHO05D006096 2.1e-24 115.5 67 82.1
CARHR094600 Cardamine hirsuta HOM05D005412 ORTHO05D006096 2.1e-24 115.5 67 82.1
DCAR_022030 Daucus carota HOM05D005412 ORTHO05D006096 2.1e-24 115.5 67 82.1
FAN20G2783 Fragaria x ananassa HOM05D005412 ORTHO05D006096 2.1e-24 115.5 65 81.5
HPP92_028322 Vanilla planifolia HOM05D005412 ORTHO05D006096 2.1e-24 115.5 67 80.6
Psat7g124160 Pisum sativum HOM05D005412 ORTHO05D006096 2.7e-24 115.2 67 77.6
ClCG05G010030 Citrullus lanatus HOM05D005412 ORTHO05D006096 3.5e-24 114.8 67 76.1
MELO3C019513.2 Cucumis melo HOM05D005412 ORTHO05D006096 3.5e-24 114.8 67 76.1
arahy.Tifrunner.gnm1.ann1.4LZP30 Arachis hypogaea HOM05D005412 ORTHO05D006096 4.6e-24 114.4 67 79.1
arahy.Tifrunner.gnm1.ann1.Q5Y61J Arachis hypogaea HOM05D005412 ORTHO05D006096 4.6e-24 114.4 67 79.1
COL.COLO4_32667 Corchorus olitorius HOM05D005412 ORTHO05D006096 6.0e-24 114.0 64 87.5
Thhalv10019879m.g Eutrema salsugineum HOM05D005412 ORTHO05D006096 6.0e-24 114.0 67 80.6
Sp3g17260 Schrenkiella parvula HOM05D005412 ORTHO05D006096 6.0e-24 114.0 67 80.6
Eucgr.I01159 Eucalyptus grandis HOM05D005412 ORTHO05D006096 7.8e-24 113.6 65 80.0
Manes.10G065500 Manihot esculenta HOM05D005412 ORTHO05D006096 7.8e-24 113.6 67 76.1
Phvul.003G295800 Phaseolus vulgaris HOM05D005412 ORTHO05D006096 1.0e-23 113.2 68 79.4
VMungo0251G1021 Vigna mungo HOM05D005412 ORTHO05D006096 1.0e-23 113.2 68 79.4
Migut.B00339 Erythranthe guttata HOM05D005412 ORTHO05D006096 1.3e-23 112.8 67 77.6
Oeu025571.1 Olea europaea HOM05D005412 ORTHO05D006096 1.3e-23 112.8 79 73.4
Aa31LG8G5990 Aethionema arabicum HOM05D005412 ORTHO05D006096 1.7e-23 112.5 67 79.1
AL3G32570 Arabidopsis lyrata HOM05D005412 ORTHO05D006096 1.7e-23 112.5 67 79.1
SGA_v2.0_scaffold90G27665 Striga asiatica HOM05D005412 ORTHO05D006096 1.7e-23 112.5 67 77.6
Potri.009G102900 Populus trichocarpa HOM05D005412 ORTHO05D006096 2.3e-23 112.1 67 77.6
Sabra09G0078800 Salix brachista HOM05D005412 ORTHO05D006096 3.0e-23 111.7 67 77.6
TWI75G0165 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 3.0e-23 111.7 67 74.6
Ah.02g117120 Amaranthus hybridus HOM05D005412 ORTHO05D006096 3.9e-23 111.3 70 75.7
Cc02_g18700 Coffea canephora HOM05D005412 ORTHO05D006096 3.9e-23 111.3 67 76.1
Sc14g0001650 Simmondsia chinensis HOM05D005412 ORTHO05D006096 3.9e-23 111.3 67 79.1
Duzib052G1101 Durio zibethinus HOM05D005412 ORTHO05D006096 5.1e-23 110.9 64 84.4
Gorai.005G238500 Gossypium raimondii HOM05D005412 ORTHO05D006096 5.1e-23 110.9 64 84.4
Glyma.07G211600 Glycine max HOM05D005412 ORTHO05D006096 6.6e-23 110.5 68 77.9
TWI79G0096 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 6.6e-23 110.5 68 76.5
Sed0007905 Sechium edule HOM05D005412 ORTHO05D006096 8.6e-23 110.2 67 73.1
EL10Ac9g21835 Beta vulgaris HOM05D005412 ORTHO05D006096 1.1e-22 109.8 70 75.7
Glyma.02G133400 Glycine max HOM05D005412 ORTHO05D006096 1.1e-22 109.8 68 77.9
Lj4g0027932 Lotus japonicus HOM05D005412 ORTHO05D006096 1.1e-22 109.8 65 78.5
Sabra04G0093700 Salix brachista HOM05D005412 ORTHO05D006096 1.1e-22 109.8 67 77.6
Ciclev10027665m.g Citrus clementina HOM05D005412 ORTHO05D006096 1.5e-22 109.4 65 76.9
Duzib248G0232 Durio zibethinus HOM05D005412 ORTHO05D006096 1.5e-22 109.4 64 84.4
Haze_01830 Corylus avellana HOM05D005412 ORTHO05D006096 1.9e-22 109.0 67 73.1
Potri.004G141700 Populus trichocarpa HOM05D005412 ORTHO05D006096 1.9e-22 109.0 67 76.1
AUR62011444 Chenopodium quinoa HOM05D005412 ORTHO05D006096 2.5e-22 108.6 67 77.6
AUR62016618 Chenopodium quinoa HOM05D005412 ORTHO05D006096 2.5e-22 108.6 67 77.6
Atru.chr5.2730 Acer truncatum HOM05D005412 ORTHO05D006096 3.3e-22 108.2 65 73.8
BcaB06g25975 Brassica carinata HOM05D005412 ORTHO05D006096 4.3e-22 107.8 67 79.1
BcaNung06981 Brassica carinata HOM05D005412 ORTHO05D006096 4.3e-22 107.8 67 79.1
A05p30450 Brassica napus HOM05D005412 ORTHO05D006096 4.3e-22 107.8 67 79.1
C05p46050 Brassica napus HOM05D005412 ORTHO05D006096 4.3e-22 107.8 67 79.1
BolC5t33332H Brassica oleracea HOM05D005412 ORTHO05D006096 4.3e-22 107.8 67 79.1
BraA05t21884Z Brassica rapa HOM05D005412 ORTHO05D006096 4.3e-22 107.8 67 79.1
Carub.0003s1902 Capsella rubella HOM05D005412 ORTHO05D006096 5.6e-22 107.5 68 77.9
Solyc01g108160.3 Solanum lycopersicum HOM05D005412 ORTHO05D006096 5.6e-22 107.5 65 78.5
Sopen01g050390 Solanum pennellii HOM05D005412 ORTHO05D006096 1.6e-21 105.9 65 76.9
PGSC0003DMG400025793 Solanum tuberosum HOM05D005412 ORTHO05D006096 2.8e-21 105.1 65 76.9
CsaV3_3G018530 Cucumis sativus L. HOM05D005412 ORTHO05D006096 1.1e-20 103.2 61 73.8
Lsat_1_v5_gn_9_110121 Lactuca sativa HOM05D005412 ORTHO05D006096 1.4e-20 102.8 64 76.6
PSO210G3961 Papaver somniferum HOM05D005412 ORTHO05D006096 1.4e-20 102.8 67 70.1
unitig_21.g20750 Utricularia gibba HOM05D005412 ORTHO05D006096 2.4e-20 102.1 67 70.1
PSO170G0229 Papaver somniferum HOM05D005412 ORTHO05D006096 4.0e-20 101.3 67 70.1
CDE02G1280 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 6.8e-20 100.5 72 63.9
CDE09G1352 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 1.2e-19 99.8 67 67.2
Hund00331 Selenicereus undatus HOM05D005412 ORTHO05D006096 2.0e-19 99.0 64 71.9
CiPaw.06G143300 Carya illinoinensis HOM05D005412 ORTHO05D006096 7.6e-19 97.1 56 82.1
MBI02_g17325_MAGBIO Magnolia biondii HOM05D005412 ORTHO05D006096 1.7e-18 95.9 56 78.6
Oeu003689.1 Olea europaea HOM05D005412 ORTHO05D006096 1.7e-18 95.9 68 73.5
SHI05374 Sapria himalayana HOM05D005412 ORTHO05D006096 3.8e-18 94.7 67 64.2
BcaNung06609 Brassica carinata HOM05D005412 ORTHO05D006096 1.6e-16 89.4 55 80.0
Aqoxy5G01253 Aquilegia oxysepala HOM05D005412 ORTHO05D006096 1.6e-13 79.3 69 52.2
ATR0100G063 Amborella trichopoda HOM05D005412 ORTHO05D006096 1.5e-11 72.8 67 50.7
Zm00001eb280540 Zea mays HOM05D005412 ORTHO05D006096 2.0e-11 72.4 50 62.0
Mapoly0038s0067 Marchantia polymorpha HOM05D005412 ORTHO05D006096 2.2e-10 68.9 56 55.4
AagrBONN_evm.TU.Sc2ySwM_369.474 Anthoceros agrestis HOM05D005412 ORTHO05D006096 6.4e-10 67.4 57 49.1
SEGI_28745 Sequoiadendron giganteum HOM05D005412 ORTHO05D006096 3.2e-09 65.1 52 61.5
CBR_g37914 Chara braunii HOM05D000019 ORTHO05D000048 4.2e-09 64.7 56 51.8
Pp3c13_15610 Physcomitrium patens HOM05D005412 ORTHO05D006096 9.3e-09 63.5 56 48.2
Cre09.g408950 Chlamydomonas reinhardtii HOM05D005412 ORTHO05D006096 1.1e-06 56.6 53 43.4
Migut.B00337 Erythranthe guttata HOM05D005412 ORTHO05D006096 2.5e-06 55.5 73 43.8
MCO03G368 Micromonas commoda HOM05D005412 ORTHO05D006096 4.3e-06 54.7 52 44.2


User provided reference genes

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