Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 3.8e-293 1010.7 511 100.0
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 3.9e-237 824.7 505 82.2
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 3.0e-229 798.5 521 78.3
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 2.5e-228 795.4 519 79.6
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 2.4e-226 788.9 511 78.3
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 1.9e-223 779.2 513 78.2
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 1.2e-222 776.5 513 77.6
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 3.5e-222 775.0 516 77.7
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 1.0e-221 773.5 510 76.9
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 3.0e-221 771.9 513 77.4
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 8.7e-221 770.4 500 78.2
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 8.7e-221 770.4 513 75.8
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 1.1e-220 770.0 517 77.2
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 1.6e-219 766.1 514 76.8
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 1.6e-219 766.1 516 76.9
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 4.8e-219 764.6 526 74.0
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 6.3e-219 764.2 515 77.1
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 8.2e-219 763.8 514 76.7
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 5.0e-216 754.6 493 77.9
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 5.0e-216 754.6 473 80.3
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 2.7e-214 748.8 510 74.5
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 2.7e-214 748.8 523 73.0
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 2.7e-214 748.8 514 75.9
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 2.3e-213 745.7 510 75.5
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 8.7e-213 743.8 513 74.5
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 1.9e-212 742.7 510 73.3
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 1.9e-212 742.7 512 73.8
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 6.3e-211 737.6 510 75.5
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 1.1e-210 736.9 507 75.3
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 1.1e-210 736.9 520 74.0
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 2.4e-210 735.7 513 74.1
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 2.4e-210 735.7 518 73.2
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 2.4e-210 735.7 507 74.4
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 3.1e-210 735.3 469 78.5
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 6.9e-210 734.2 502 75.3
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 9.0e-210 733.8 521 71.8
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 1.2e-209 733.4 518 72.4
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 1.5e-209 733.0 516 71.1
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 2.6e-209 732.3 521 71.6
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 3.4e-209 731.9 516 72.7
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 7.7e-209 730.7 510 74.1
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 3.8e-208 728.4 526 71.9
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 3.8e-208 728.4 509 72.9
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 5.0e-208 728.0 498 72.7
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 6.5e-208 727.6 509 70.7
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 1.1e-207 726.9 512 72.5
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 1.4e-207 726.5 479 77.5
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.9e-207 726.1 524 71.6
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 2.5e-207 725.7 512 72.3
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 2.5e-207 725.7 504 72.2
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 2.5e-207 725.7 515 71.7
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 9.4e-207 723.8 508 72.2
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 9.4e-207 723.8 479 76.0
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 9.4e-207 723.8 488 73.6
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 1.2e-206 723.4 515 71.3
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 1.6e-206 723.0 472 75.8
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 2.7e-206 722.2 511 72.4
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 4.6e-206 721.5 510 72.4
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 1.0e-205 720.3 510 71.8
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 3.9e-205 718.4 478 75.9
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 6.7e-205 717.6 507 70.4
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 6.7e-205 717.6 509 71.5
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 8.8e-205 717.2 520 72.5
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 1.5e-204 716.5 443 79.2
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 1.7e-203 713.0 470 75.5
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 2.2e-203 712.6 494 72.3
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 3.7e-203 711.8 519 72.3
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 4.8e-203 711.4 511 71.0
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 8.2e-203 710.7 508 70.9
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 1.1e-202 710.3 474 74.9
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 1.4e-202 709.9 502 70.5
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 4.1e-202 708.4 502 70.3
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 5.3e-202 708.0 482 74.5
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 3.4e-201 705.3 480 72.9
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 3.4e-201 705.3 472 74.8
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 7.7e-201 704.1 499 70.1
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 1.7e-200 703.0 410 83.2
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 2.2e-200 702.6 505 71.1
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 2.9e-200 702.2 498 70.9
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 5.0e-200 701.4 480 75.2
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 2.5e-199 699.1 499 70.1
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 2.5e-199 699.1 609 62.6
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 7.2e-199 697.6 468 75.4
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 2.1e-198 696.0 499 70.3
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 4.7e-198 694.9 523 69.0
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 7.9e-198 694.1 470 74.0
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 1.5e-196 689.9 468 73.5
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 2.8e-195 685.6 468 74.8
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 6.3e-195 684.5 503 70.2
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 8.5e-192 674.1 470 73.0
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 5.5e-191 671.4 465 71.8
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 7.2e-191 671.0 388 82.0
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 7.2e-191 671.0 450 74.4
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 8.0e-190 667.5 452 72.8
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 1.5e-188 663.3 419 76.8
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 4.4e-188 661.8 479 71.2
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 1.4e-178 630.2 510 68.0
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 1.8e-173 613.2 339 88.2
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 3.8e-168 595.5 495 62.2
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 4.4e-164 582.0 378 76.5
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 2.2e-163 579.7 386 76.7
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 3.6e-158 562.4 395 72.2
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 2.3e-149 533.1 341 80.4
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 4.0e-141 505.8 512 51.6
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 2.4e-138 496.5 409 57.9
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 6.6e-136 488.4 406 58.6
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 8.7e-128 461.5 452 53.3
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 4.8e-118 429.1 509 46.6
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 5.8e-108 395.6 440 52.3
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 1.2e-105 387.9 254 77.6
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 5.1e-104 382.5 514 46.1
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 1.2e-100 371.3 504 46.0
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 4.5e-100 369.4 484 49.0
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 1.7e-99 367.5 406 51.0
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 2.2e-99 367.1 487 46.6
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 7.2e-98 362.1 556 41.2
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 4.8e-94 349.4 445 44.0
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 2.6e-92 343.6 455 48.4
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 4.8e-86 322.8 176 86.9
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 2.6e-76 290.4 169 81.7
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 4.7e-73 279.6 447 39.1
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 1.2e-57 228.4 211 62.6
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 4.7e-41 173.3 138 65.2
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 5.2e-40 169.9 131 67.2
Hma1.2p1_0066F.1_g036790 Hydrangea macrophylla HOM05D005713 ORTHO05D021118 1.7e-30 138.3 136 63.2
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 3.7e-30 137.1 82 79.3
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 1.4e-29 135.2 105 62.9
Actinidia27912 Actinidia chinensis HOM05D005713 ORTHO05D021118 4.3e-26 123.6 142 56.3
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 1.6e-25 121.7 141 45.4
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 9.9e-23 112.5 104 62.5
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 3.0e-19 100.9 58 84.5
PGSC0003DMG400003326 Solanum tuberosum HOM05D005713 ORTHO05D021118 1.5e-18 98.6 127 46.5
PGSC0003DMG400019020 Solanum tuberosum HOM05D005713 ORTHO05D021118 1.4e-16 92.0 127 44.1
QL11p041915 Quercus lobata HOM05D005713 ORTHO05D021118 8.4e-14 82.8 138 46.4
Actinidia27913 Actinidia chinensis HOM05D005713 ORTHO05D007751 9.6e-10 69.3 41 80.5
QL11p041469 Quercus lobata HOM05D005713 ORTHO05D338114 1.2e-07 62.4 38 78.9


User provided reference genes

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