Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 1.6e-120 436.4 273 100.0
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 4.7e-56 222.2 261 56.7
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.4e-55 220.7 261 57.5
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 2.3e-55 219.9 152 78.3
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 1.7e-53 213.8 156 76.3
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 1.3e-50 204.1 140 77.1
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 1.3e-50 204.1 185 66.5
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 5.1e-50 202.2 222 55.0
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 2.5e-49 199.9 164 68.3
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 4.3e-49 199.1 190 59.5
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 5.6e-49 198.7 200 61.5
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 5.6e-49 198.7 199 57.8
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 9.6e-49 198.0 180 61.7
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 1.2e-48 197.6 174 68.4
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 1.6e-48 197.2 246 55.3
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 1.6e-48 197.2 145 72.4
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 2.1e-48 196.8 181 61.3
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 2.8e-48 196.4 174 67.8
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 2.8e-48 196.4 174 67.8
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 4.7e-48 195.7 169 68.0
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 6.2e-48 195.3 262 51.9
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 1.4e-47 194.1 251 49.4
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 1.8e-47 193.7 248 51.6
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 5.2e-47 192.2 180 60.6
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 6.8e-47 191.8 180 60.6
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.5e-46 190.7 151 74.8
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 3.4e-46 189.5 244 52.0
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 4.4e-46 189.1 148 66.9
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 4.4e-46 189.1 183 59.6
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 9.9e-46 188.0 186 57.0
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 9.9e-46 188.0 260 51.5
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 1.3e-45 187.6 180 60.6
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 3.8e-45 186.0 263 50.2
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 1.1e-44 184.5 180 60.6
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 1.4e-44 184.1 219 54.3
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 1.4e-44 184.1 237 52.3
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 1.9e-44 183.7 232 51.3
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 3.2e-44 183.0 137 69.3
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 3.2e-44 183.0 171 60.8
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.1e-44 181.8 180 60.0
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 9.3e-44 181.4 170 58.2
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.2e-43 181.0 116 78.4
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 1.6e-43 180.6 173 60.7
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 2.1e-43 180.3 178 57.3
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 4.6e-43 179.1 131 71.0
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 6.0e-43 178.7 178 57.3
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 7.8e-43 178.3 206 56.3
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 1.3e-42 177.6 166 59.0
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 2.3e-42 176.8 280 46.1
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 2.3e-42 176.8 159 61.6
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 2.3e-42 176.8 179 59.2
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.3e-42 176.8 179 59.2
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 3.0e-42 176.4 226 50.0
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 3.0e-42 176.4 171 61.4
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 3.9e-42 176.0 156 62.2
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 3.9e-42 176.0 186 56.5
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.9e-41 173.7 179 58.7
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 1.9e-41 173.7 179 59.2
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 2.5e-41 173.3 137 65.7
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 3.3e-41 172.9 144 65.3
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 4.3e-41 172.6 149 64.4
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 4.3e-41 172.6 251 47.4
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 4.3e-41 172.6 177 55.9
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 5.6e-41 172.2 163 58.3
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 9.6e-41 171.4 168 57.7
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.3e-40 171.0 133 68.4
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 4.8e-40 169.1 138 69.6
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 1.8e-39 167.2 178 56.7
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 3.1e-39 166.4 249 48.6
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 4.0e-39 166.0 141 67.4
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 4.0e-39 166.0 258 45.3
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 9.0e-39 164.9 126 69.8
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.2e-38 164.5 138 67.4
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 1.2e-38 164.5 167 56.9
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 2.0e-38 163.7 108 80.6
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 3.4e-38 162.9 223 46.2
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 4.4e-38 162.5 253 43.5
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 2.9e-37 159.8 141 64.5
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 2.9e-37 159.8 141 64.5
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 4.9e-37 159.1 141 64.5
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.1e-36 157.9 140 64.3
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 1.4e-36 157.5 141 64.5
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 1.4e-36 157.5 141 64.5
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 4.2e-36 156.0 261 44.8
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 5.4e-36 155.6 173 54.9
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 9.3e-36 154.8 140 63.6
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 4.6e-35 152.5 140 62.9
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 1.3e-34 151.0 177 52.0
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 1.7e-34 150.6 136 63.2
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 8.7e-34 148.3 157 57.3
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.9e-33 147.1 110 70.9
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 5.6e-33 145.6 206 47.6
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 1.3e-32 144.4 209 47.8
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 1.3e-32 144.4 209 47.8
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 2.1e-32 143.7 99 76.8
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 2.8e-32 143.3 194 50.0
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 4.8e-32 142.5 215 47.0
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 1.8e-31 140.6 140 55.7
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 3.1e-31 139.8 209 47.4
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 3.1e-31 139.8 209 47.4
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.1e-28 131.3 194 48.5
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.4e-28 131.0 150 58.7
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 3.2e-28 129.8 131 55.7
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 4.2e-28 129.4 96 70.8
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 6.5e-21 105.5 116 48.3
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 2.7e-19 100.1 152 44.1
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 7.9e-19 98.6 88 64.8
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.0e-18 98.2 89 64.0
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.8e-18 97.4 61 77.0
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.8e-18 97.4 61 77.0
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 3.9e-18 96.3 110 49.1
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 3.9e-18 96.3 126 42.1
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 5.1e-18 95.9 87 64.4
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 6.7e-18 95.5 59 78.0
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 9.0e-15 85.1 67 70.1
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 1.5e-14 84.3 54 75.9
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.5e-14 84.3 54 77.8
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 3.4e-14 83.2 109 55.0
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 9.3e-12 75.1 51 72.5
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 3.5e-11 73.2 53 71.7
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 3.3e-09 66.6 82 41.5


User provided reference genes

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