Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23461 Davidia involucrata HOM05D001544 ORTHO05D005712 1.7e-93 345.9 168 100.0
Nn5g29207 Nelumbo nucifera HOM05D001544 ORTHO05D002732 3.8e-48 195.3 138 71.0
Thecc.02G076200 Theobroma cacao HOM05D001544 ORTHO05D005712 8.8e-45 184.1 142 62.0
TAR625G1395 Trochodendron aralioides HOM05D001544 ORTHO05D005712 1.5e-44 183.3 132 70.5
Aqoxy5G01497 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 7.4e-44 181.0 112 75.0
QL11p046076 Quercus lobata HOM05D001544 ORTHO05D005712 2.2e-43 179.5 141 65.2
Atru.chr5.3135 Acer truncatum HOM05D001544 ORTHO05D005712 4.8e-43 178.3 141 60.3
TWI79G0125 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 1.8e-42 176.4 134 63.4
CsaV3_2G015260 Cucumis sativus L. HOM05D001544 ORTHO05D005712 2.4e-42 176.0 131 66.4
ClCG11G003920 Citrullus lanatus HOM05D001544 ORTHO05D005712 7.0e-42 174.5 132 65.9
Eucgr.G01724 Eucalyptus grandis HOM05D001544 ORTHO05D005712 1.2e-41 173.7 118 67.8
MELO3C023351.2 Cucumis melo HOM05D001544 ORTHO05D005712 1.6e-41 173.3 131 66.4
Dinv40055 Davidia involucrata HOM05D001544 ORTHO05D005712 4.5e-41 171.8 133 64.7
Sed0017058 Sechium edule HOM05D001544 ORTHO05D005712 7.7e-41 171.0 132 63.6
CiPaw.06G128900 Carya illinoinensis HOM05D001544 ORTHO05D005712 1.7e-40 169.9 133 63.2
GSVIVG01024183001 Vitis vinifera HOM05D001544 ORTHO05D005712 2.2e-40 169.5 132 65.2
FvH4_2g10310 Fragaria vesca HOM05D001544 ORTHO05D005712 2.9e-40 169.1 136 63.2
FAN20G3124 Fragaria x ananassa HOM05D001544 ORTHO05D005712 2.9e-40 169.1 136 63.2
Gohir.D02G220200 Gossypium hirsutum HOM05D001544 ORTHO05D005712 5.0e-40 168.3 121 66.9
Gorai.005G248100 Gossypium raimondii HOM05D001544 ORTHO05D005712 5.0e-40 168.3 121 66.9
FAN24G0484 Fragaria x ananassa HOM05D001544 ORTHO05D005712 8.5e-40 167.5 136 62.5
Cfa005097 Carpinus fangiana HOM05D001544 ORTHO05D005712 1.1e-39 167.2 133 63.2
Ciclev10029261m.g Citrus clementina HOM05D001544 ORTHO05D005712 1.1e-39 167.2 122 67.2
Gohir.A03G198800 Gossypium hirsutum HOM05D001544 ORTHO05D005712 1.5e-39 166.8 121 66.1
Duzib132G0442 Durio zibethinus HOM05D001544 ORTHO05D005712 1.9e-39 166.4 150 58.7
Sc03g0003410 Simmondsia chinensis HOM05D001544 ORTHO05D005712 3.2e-39 165.6 135 62.2
MD10G1064100 Malus domestica HOM05D001544 ORTHO05D005712 5.5e-39 164.9 111 68.5
Glyma.11G111600 Glycine max HOM05D001544 ORTHO05D005712 1.2e-38 163.7 121 65.3
FAN15G2093 Fragaria x ananassa HOM05D001544 ORTHO05D005712 1.6e-38 163.3 136 61.0
Lalb_Chr01g0002161 Lupinus albus HOM05D001544 ORTHO05D005712 6.1e-38 161.4 113 63.7
Prupe.8G085800 Prunus persica HOM05D001544 ORTHO05D005712 6.1e-38 161.4 111 69.4
TWI75G0115 Tripterygium wilfordii HOM05D001544 ORTHO05D005712 6.1e-38 161.4 139 59.0
CANSAT11G1780 Cannabis sativa HOM05D001544 ORTHO05D005712 1.4e-37 160.2 109 70.6
arahy.Tifrunner.gnm1.ann1.3WL649 Arachis hypogaea HOM05D001544 ORTHO05D005712 3.0e-37 159.1 123 59.3
Lj3g0003276 Lotus japonicus HOM05D001544 ORTHO05D005712 3.0e-37 159.1 117 62.4
Hma1.2p1_0266F.1_g106940 Hydrangea macrophylla HOM05D001544 ORTHO05D005712 4.0e-37 158.7 116 64.7
RcHm_v2.0_Chr6g0267511 Rosa chinensis HOM05D001544 ORTHO05D005712 4.0e-37 158.7 136 59.6
PSO170G3698 Papaver somniferum HOM05D001544 ORTHO05D005712 6.7e-37 157.9 148 51.4
Phvul.011G039500 Phaseolus vulgaris HOM05D001544 ORTHO05D005712 6.7e-37 157.9 121 62.0
Nitab4.5_0010830g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 8.8e-37 157.5 105 69.5
PGR042G1893 Punica granatum HOM05D001544 ORTHO05D005712 2.0e-36 156.4 114 64.0
arahy.Tifrunner.gnm1.ann1.3TM7ML Arachis hypogaea HOM05D001544 ORTHO05D005712 4.4e-36 155.2 120 59.2
Psat7g226160 Pisum sativum HOM05D001544 ORTHO05D005712 1.3e-35 153.7 153 50.3
Lalb_Chr19g0138931 Lupinus albus HOM05D001544 ORTHO05D005712 1.7e-35 153.3 129 56.6
Nitab4.5_0000753g0030 Nicotiana tabacum HOM05D001544 ORTHO05D005712 1.7e-35 153.3 116 62.1
Sed0002010 Sechium edule HOM05D001544 ORTHO05D005712 2.2e-35 152.9 131 57.3
Hund14027 Selenicereus undatus HOM05D001544 ORTHO05D005712 3.7e-35 152.1 122 63.9
HanXRQChr14g0441601 Helianthus annuus HOM05D001544 ORTHO05D005712 4.8e-35 151.8 138 52.9
Lj4A214G24 Lonicera japonica HOM05D001544 ORTHO05D005712 6.3e-35 151.4 144 55.6
Cc07_g10380 Coffea canephora HOM05D001544 ORTHO05D005712 8.2e-35 151.0 134 54.5
HanXRQChr13g0414781 Helianthus annuus HOM05D001544 ORTHO05D005712 1.8e-34 149.8 126 54.8
HPP92_022282 Vanilla planifolia HOM05D001544 ORTHO05D005712 1.8e-34 149.8 132 53.0
EL10As8g23856 Beta vulgaris HOM05D001544 ORTHO05D005712 3.1e-34 149.1 153 54.9
TPR.G34176 Trifolium pratense HOM05D001544 ORTHO05D005712 3.1e-34 149.1 111 61.3
Glyma.01G006900 Glycine max HOM05D001544 ORTHO05D005712 4.1e-34 148.7 121 58.7
PSO210G7387 Papaver somniferum HOM05D001544 ORTHO05D005712 5.3e-34 148.3 133 54.9
vmacro21904 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 1.6e-33 146.7 141 56.0
PSO675G4981 Papaver somniferum HOM05D001544 ORTHO05D005712 2.7e-33 146.0 134 58.2
Aqoxy6G02390 Aquilegia oxysepala HOM05D001544 ORTHO05D005712 4.5e-33 145.2 118 55.1
Dinv42006 Davidia involucrata HOM05D001544 ORTHO05D002732 4.5e-33 145.2 134 61.2
PSO541G2534 Papaver somniferum HOM05D001544 ORTHO05D005712 4.5e-33 145.2 112 65.2
Rhsim10G0214300 Rhododendron simsii HOM05D001544 ORTHO05D005712 7.7e-33 144.4 145 54.5
Medtr4g032740 Medicago truncatula HOM05D001544 ORTHO05D005712 1.3e-32 143.7 128 54.7
PGSC0003DMG401022539 Solanum tuberosum HOM05D001544 ORTHO05D005712 2.2e-32 142.9 116 56.9
Sopen03g006440 Solanum pennellii HOM05D001544 ORTHO05D005712 3.8e-32 142.1 141 50.4
CSS0007563 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 5.0e-32 141.7 109 58.7
ECA238G2610 Erigeron canadensis HOM05D002906 ORTHO05D003211 6.5e-32 141.4 113 56.6
Lsat_1_v5_gn_2_78361 Lactuca sativa HOM05D001544 ORTHO05D005712 6.5e-32 141.4 127 52.0
Solyc03g033650.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 3.2e-31 139.0 116 55.2
QL06p034007 Quercus lobata HOM05D001544 ORTHO05D005712 4.2e-31 138.7 138 52.2
CSS0013177 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D005712 5.5e-31 138.3 134 51.5
Dinv33599 Davidia involucrata HOM05D001544 ORTHO05D005712 7.2e-31 137.9 93 66.7
arahy.Tifrunner.gnm1.ann1.N6BS4T Arachis hypogaea HOM05D001544 ORTHO05D005712 9.4e-31 137.5 100 61.0
SEGI_21342 Sequoiadendron giganteum HOM05D001544 ORTHO05D005712 1.2e-30 137.1 141 52.5
MSTRG.23282 Avicennia marina HOM05D001544 ORTHO05D005712 2.1e-30 136.3 133 49.6
VMungo1127G0458 Vigna mungo HOM05D001544 ORTHO05D005712 3.6e-30 135.6 103 57.3
SGA_v2.0_scaffold2G01246 Striga asiatica HOM05D001544 ORTHO05D005712 4.7e-30 135.2 113 54.0
Cpa.g.sc6.211 Carica papaya HOM05D001544 ORTHO05D005712 6.1e-30 134.8 134 50.0
Lj3g0002354 Lotus japonicus HOM05D001544 ORTHO05D005712 2.3e-29 132.9 116 55.2
vmacro22095 Vaccinium macrocarpon HOM05D001544 ORTHO05D005712 1.2e-28 130.6 128 53.9
AT3G51100 Arabidopsis thaliana HOM05D001544 ORTHO05D005712 2.6e-28 129.4 113 54.0
CARHR160690 Cardamine hirsuta HOM05D001544 ORTHO05D005712 2.6e-28 129.4 112 54.5
PGSC0003DMG402003620 Solanum tuberosum HOM05D001544 ORTHO05D005712 3.4e-28 129.0 116 54.3
SGA_v2.0_scaffold51G18782 Striga asiatica HOM05D001544 ORTHO05D005712 5.7e-28 128.3 114 50.0
THA.LOC104821318 Tarenaya hassleriana HOM05D001544 ORTHO05D005712 7.5e-28 127.9 139 45.3
AL5G31520 Arabidopsis lyrata HOM05D001544 ORTHO05D005712 9.8e-28 127.5 112 53.6
Sp5g11110 Schrenkiella parvula HOM05D001544 ORTHO05D005712 1.3e-27 127.1 127 48.8
Carub.0005s1750 Capsella rubella HOM05D001544 ORTHO05D005712 2.2e-27 126.3 112 52.7
Thhalv10010713m.g Eutrema salsugineum HOM05D001544 ORTHO05D005712 2.2e-27 126.3 127 48.0
Manes.02G100900 Manihot esculenta HOM05D001544 ORTHO05D005712 2.2e-27 126.3 141 48.9
Oeu021945.1 Olea europaea HOM05D001544 ORTHO05D005712 2.8e-27 125.9 130 46.9
Sopen02g029220 Solanum pennellii HOM05D001544 ORTHO05D005712 3.7e-27 125.6 118 53.4
Manes.01G142600 Manihot esculenta HOM05D001544 ORTHO05D005712 4.8e-27 125.2 150 52.0
Aa31LG4G19200 Aethionema arabicum HOM05D001544 ORTHO05D005712 6.3e-27 124.8 113 51.3
Solyc02g084550.3 Solanum lycopersicum HOM05D001544 ORTHO05D005712 6.3e-27 124.8 114 54.4
Haze_03811 Corylus avellana HOM05D001544 ORTHO05D005712 1.8e-26 123.2 162 45.1
BcaC06g33056 Brassica carinata HOM05D001544 ORTHO05D005712 2.4e-26 122.9 113 51.3
A03p48120 Brassica napus HOM05D001544 ORTHO05D005712 2.4e-26 122.9 113 51.3
C07p46160 Brassica napus HOM05D001544 ORTHO05D005712 2.4e-26 122.9 113 51.3
BolC7t45132H Brassica oleracea HOM05D001544 ORTHO05D005712 2.4e-26 122.9 113 51.3
BraA03t13919Z Brassica rapa HOM05D001544 ORTHO05D005712 2.4e-26 122.9 113 51.3
SalBow8G0407 Salvia bowleyana HOM05D001544 ORTHO05D005712 2.4e-26 122.9 96 53.1
DCAR_025988 Daucus carota HOM05D001544 ORTHO05D005712 5.4e-26 121.7 139 43.9
Os06g0713900 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 5.4e-26 121.7 113 50.4
Migut.L00036 Erythranthe guttata HOM05D001544 ORTHO05D005712 9.1e-26 120.9 123 47.2
CiPaw.07G055800 Carya illinoinensis HOM05D001544 ORTHO05D005712 1.2e-25 120.6 143 46.2
TAR381G0232 Trochodendron aralioides HOM05D001544 ORTHO05D005712 1.2e-25 120.6 85 68.2
Potri.007G016200 Populus trichocarpa HOM05D001544 ORTHO05D005712 7.7e-25 117.9 146 45.2
Potri.005G117400 Populus trichocarpa HOM05D001544 ORTHO05D005712 1.3e-24 117.1 113 52.2
Prupe.7G164800 Prunus persica HOM05D001544 ORTHO05D005712 2.5e-23 112.8 132 45.5
MD15G1249400 Malus domestica HOM05D001544 ORTHO05D005712 5.5e-23 111.7 134 44.0
unitig_0.g2167 Utricularia gibba HOM05D001544 ORTHO05D005712 5.5e-23 111.7 84 58.3
Os09g0530700 Oryza sativa ssp. japonica HOM05D001544 ORTHO05D005712 7.2e-23 111.3 122 45.1
Peaxi162Scf00010g00610 Petunia axillaris HOM05D001544 ORTHO05D005712 7.2e-23 111.3 111 49.5
Zm00001eb103400 Zea mays HOM05D001544 ORTHO05D005712 1.6e-22 110.2 114 45.6
Mapoly0074s0044 Marchantia polymorpha HOM05D001544 ORTHO05D005712 4.7e-22 108.6 129 45.0
RcHm_v2.0_Chr2g0099951 Rosa chinensis HOM05D001544 ORTHO05D005712 4.7e-22 108.6 111 51.4
Zm00001eb227920 Zea mays HOM05D001544 ORTHO05D005712 4.7e-22 108.6 110 48.2
MD02G1135800 Malus domestica HOM05D001544 ORTHO05D005712 4.0e-21 105.5 140 43.6
Rhsim08G0035500 Rhododendron simsii HOM05D001544 ORTHO05D005712 6.8e-21 104.8 80 60.0
MBI14_g19737_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 8.8e-21 104.4 77 63.6
Ca_19707_v3 Cicer arietinum L. HOM05D001544 ORTHO05D005712 1.5e-20 103.6 83 56.6
Migut.H02483 Erythranthe guttata HOM05D001544 ORTHO05D005712 1.5e-20 103.6 106 46.2
AagrBONN_evm.TU.Sc2ySwM_362.490 Anthoceros agrestis HOM05D001544 ORTHO05D005712 2.6e-20 102.8 135 42.2
Thecc.01G023700 Theobroma cacao HOM05D001544 ORTHO05D005712 3.4e-20 102.4 118 44.1
FAN26G2191 Fragaria x ananassa HOM05D001544 ORTHO05D005712 7.5e-20 101.3 140 44.3
CDE12G0819 Ceratophyllum demersum HOM05D001544 ORTHO05D002732 2.2e-19 99.8 135 44.4
FAN23G1654 Fragaria x ananassa HOM05D002906 ORTHO05D003211 1.4e-18 97.1 140 43.6
FAN28G0278 Fragaria x ananassa HOM05D001544 ORTHO05D005712 1.4e-18 97.1 140 43.6
FAN23G2664 Fragaria x ananassa HOM05D001544 ORTHO05D005712 4.1e-18 95.5 123 45.5
FvH4_1g12190 Fragaria vesca HOM05D001544 ORTHO05D005712 1.2e-17 94.0 117 44.4
Pp3c14_16330 Physcomitrium patens HOM05D001544 ORTHO05D005712 1.3e-16 90.5 141 38.3
Pp3c26_11470 Physcomitrium patens HOM05D001544 ORTHO05D005712 2.3e-16 89.7 97 41.2
MBI14_g19731_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D005712 5.0e-16 88.6 107 47.7
Gohir.D11G185900 Gossypium hirsutum HOM05D001544 ORTHO05D005712 6.6e-16 88.2 140 33.6
Pp3c3_3130 Physcomitrium patens HOM05D001544 ORTHO05D005712 1.1e-15 87.4 97 39.2
Sabra05G0096400 Salix brachista HOM05D001544 ORTHO05D005712 2.5e-15 86.3 143 37.8
SMO004G0024 Selaginella moellendorffii HOM05D001544 ORTHO05D005712 2.5e-15 86.3 138 38.4
Cfa006938 Carpinus fangiana HOM05D001544 ORTHO05D005712 3.3e-15 85.9 73 56.2
Oeu037732.1 Olea europaea HOM05D001544 ORTHO05D005712 9.5e-15 84.3 70 57.1
Gohir.A11G178100 Gossypium hirsutum HOM05D001544 ORTHO05D005712 1.2e-14 84.0 142 33.1
Gorai.007G197500 Gossypium raimondii HOM05D001544 ORTHO05D005712 1.6e-14 83.6 145 33.1
SMO361G0705 Selaginella moellendorffii HOM05D001544 ORTHO05D005712 1.4e-13 80.5 90 44.4
Sabra07G0013400 Salix brachista HOM05D001544 ORTHO05D005712 1.8e-13 80.1 107 44.9
Zm00001eb319500 Zea mays HOM05D001544 ORTHO05D005712 3.0e-08 62.8 121 30.6
Thecc.01G023500 Theobroma cacao HOM05D001544 ORTHO05D005712 8.0e-06 54.7 73 38.4


User provided reference genes

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