Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23325 Davidia involucrata HOM05D025042 ORTHO05D000132 4.3e-75 284.6 153 100.0
Dinv39228 Davidia involucrata HOM05D000231 ORTHO05D000132 6.6e-15 84.7 45 95.6
Dinv02662 Davidia involucrata HOM05D014046 ORTHO05D016984 2.8e-13 79.3 45 91.1
Dinv28314 Davidia involucrata HOM05D025042 ORTHO05D000132 2.8e-13 79.3 48 85.4
Dinv10149 Davidia involucrata HOM05D025042 ORTHO05D000132 8.1e-13 77.8 45 88.9
Dinv44959 Davidia involucrata HOM05D000231 ORTHO05D000132 6.8e-12 74.7 45 80.0
Rhsim06G0061900 Rhododendron simsii HOM05D000231 ORTHO05D000132 1.4e-09 67.0 45 73.3
vmacro21436 Vaccinium macrocarpon HOM05D000231 ORTHO05D000132 1.2e-08 63.9 45 66.7
CSS0006197 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 3.5e-08 62.4 45 71.1
Actinidia10194 Actinidia chinensis HOM05D000231 ORTHO05D000132 4.6e-08 62.0 45 60.0
QL12p037951 Quercus lobata HOM05D000231 ORTHO05D000132 4.6e-08 62.0 45 64.4
Dinv15945 Davidia involucrata HOM05D025042 ORTHO05D000132 1.7e-07 60.1 33 93.9
Atru.chr13.823 Acer truncatum HOM05D000231 ORTHO05D000132 3.0e-07 59.3 45 62.2
Actinidia22691 Actinidia chinensis HOM05D000231 ORTHO05D000132 3.9e-07 58.9 45 60.0
Glyma.06G046200 Glycine max HOM05D000231 ORTHO05D000132 3.9e-07 58.9 83 36.1
CSS0048218 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 6.6e-07 58.2 38 71.1
Cfa013787 Carpinus fangiana HOM05D000231 ORTHO05D000132 6.6e-07 58.2 45 62.2
Haze_22447 Corylus avellana HOM05D000231 ORTHO05D000132 6.6e-07 58.2 45 62.2
Glyma.04G045500 Glycine max HOM05D000231 ORTHO05D000132 6.6e-07 58.2 83 36.1
Manes.18G045900 Manihot esculenta HOM05D000231 ORTHO05D000132 8.6e-07 57.8 45 62.2
CSS0033143 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 1.1e-06 57.4 38 71.1
GSVIVG01009353001 Vitis vinifera HOM05D000231 ORTHO05D000132 1.1e-06 57.4 44 65.9
CiPaw.07G175600 Carya illinoinensis HOM05D000231 ORTHO05D000132 1.5e-06 57.0 45 55.6
MD15G1070900 Malus domestica HOM05D000231 ORTHO05D000132 2.5e-06 56.2 45 60.0
Manes.05G181500 Manihot esculenta HOM05D000231 ORTHO05D000132 2.5e-06 56.2 45 60.0
CiPaw.08G050000 Carya illinoinensis HOM05D000231 ORTHO05D000132 3.3e-06 55.8 45 55.6
TAR376G0828 Trochodendron aralioides HOM05D000231 ORTHO05D000132 3.3e-06 55.8 72 40.3
COL.COLO4_28514 Corchorus olitorius HOM05D000231 ORTHO05D000132 4.3e-06 55.5 58 48.3
Duzib093G2066 Durio zibethinus HOM05D000231 ORTHO05D000132 4.3e-06 55.5 58 51.7
TAR628G1445 Trochodendron aralioides HOM05D000231 ORTHO05D000132 5.6e-06 55.1 47 55.3
TPR.G33713 Trifolium pratense HOM05D000231 ORTHO05D000132 7.3e-06 54.7 71 40.8
Nn1g04579 Nelumbo nucifera HOM05D000231 ORTHO05D000132 9.6e-06 54.3 47 53.2


User provided reference genes

Program Settings