Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 8.2e-135 483.8 258 100.0
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 3.2e-70 269.2 255 65.5
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 9.3e-70 267.7 250 66.4
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 9.9e-64 247.7 271 59.4
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 8.4e-55 218.0 261 56.3
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 7.9e-53 211.5 226 57.5
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 2.1e-50 203.4 260 51.5
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 6.3e-50 201.8 252 54.8
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 3.1e-49 199.5 220 58.6
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 4.1e-49 199.1 254 53.5
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 2.0e-48 196.8 262 53.8
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 1.1e-46 191.0 246 53.3
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.4e-46 190.7 253 52.6
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 4.2e-46 189.1 256 52.0
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 9.3e-46 188.0 257 49.8
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 1.6e-45 187.2 234 54.3
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 2.3e-44 183.3 233 52.8
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 3.9e-44 182.6 231 51.9
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 3.3e-43 179.5 245 51.8
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 9.7e-43 177.9 245 51.8
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.6e-42 177.2 186 58.1
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 6.3e-42 175.3 246 48.8
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 6.3e-42 175.3 265 47.5
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 8.2e-42 174.9 244 51.2
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 2.4e-41 173.3 193 56.0
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 3.1e-41 172.9 251 50.2
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 4.1e-41 172.6 264 48.1
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 5.3e-41 172.2 234 49.6
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 2.0e-40 170.2 177 62.1
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 2.0e-40 170.2 245 48.2
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 2.6e-40 169.9 257 47.9
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 5.9e-40 168.7 263 46.0
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 5.9e-40 168.7 254 47.6
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 7.7e-40 168.3 298 44.0
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 1.0e-39 167.9 260 45.8
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 1.1e-38 164.5 245 49.8
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 1.4e-38 164.1 227 50.7
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 1.4e-38 164.1 221 52.5
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 3.2e-38 162.9 241 48.1
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 1.2e-37 161.0 224 53.6
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 2.7e-37 159.8 241 47.7
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 2.3e-36 156.8 161 60.2
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 3.0e-36 156.4 192 54.7
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 3.0e-36 156.4 253 45.1
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 5.1e-36 155.6 254 48.0
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 8.8e-36 154.8 248 45.2
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 1.1e-35 154.5 190 55.8
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 1.5e-35 154.1 239 45.6
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 2.5e-35 153.3 211 51.7
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 7.4e-35 151.8 255 44.7
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 7.4e-35 151.8 244 45.5
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 1.3e-34 151.0 196 51.5
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 1.7e-34 150.6 189 48.7
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 4.8e-34 149.1 234 45.3
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 6.3e-34 148.7 240 45.8
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 3.1e-33 146.4 251 46.6
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 1.5e-32 144.1 155 56.8
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 1.7e-31 140.6 192 47.4
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 1.7e-31 140.6 239 45.6
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 2.2e-31 140.2 230 47.4
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 1.4e-30 137.5 185 49.2
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 1.4e-30 137.5 196 46.9
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 2.5e-30 136.7 209 46.9
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 2.5e-30 136.7 209 46.9
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 4.2e-30 136.0 175 52.0
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 5.5e-30 135.6 209 46.9
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 5.5e-30 135.6 229 45.4
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 5.5e-30 135.6 158 56.3
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 7.2e-30 135.2 109 73.4
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 9.4e-30 134.8 226 44.7
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 9.4e-30 134.8 172 51.2
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 6.1e-29 132.1 194 44.8
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 6.1e-29 132.1 170 52.4
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 6.1e-29 132.1 294 39.8
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 7.9e-29 131.7 198 47.5
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 7.9e-29 131.7 194 44.3
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 1.0e-28 131.3 202 44.6
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 1.4e-28 131.0 187 49.7
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 1.4e-28 131.0 192 45.8
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 1.8e-28 130.6 204 45.1
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 1.8e-28 130.6 207 43.5
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 2.3e-28 130.2 207 44.0
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 2.3e-28 130.2 214 46.7
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 3.0e-28 129.8 219 44.3
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 3.0e-28 129.8 202 43.6
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 8.8e-28 128.3 203 43.3
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 5.7e-27 125.6 177 52.0
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 1.3e-26 124.4 139 54.0
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 1.3e-26 124.4 218 44.5
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 6.3e-26 122.1 168 53.6
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 3.1e-25 119.8 218 39.0
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 3.1e-25 119.8 221 42.1
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 4.1e-25 119.4 215 38.1
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 5.3e-25 119.0 104 63.5
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 2.6e-24 116.7 235 40.9
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 3.5e-24 116.3 201 45.3
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 4.5e-24 115.9 116 61.2
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 1.0e-23 114.8 271 38.0
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 5.0e-23 112.5 202 44.1
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 2.5e-22 110.2 288 39.2
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 3.2e-22 109.8 201 46.8
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 9.4e-22 108.2 126 57.9
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 2.1e-21 107.1 211 41.2
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 8.0e-21 105.1 125 59.2
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 2.0e-19 100.5 123 57.7
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 2.6e-19 100.1 180 41.7
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 9.7e-19 98.2 117 54.7
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 1.6e-16 90.9 97 60.8
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 2.9e-15 86.7 186 40.9
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 1.5e-14 84.3 187 37.4
GSVIVG01017558001 Vitis vinifera HOM05D005915 ORTHO05D007239 1.9e-14 84.0 91 52.7
Haze_16651 Corylus avellana HOM05D005915 ORTHO05D007239 3.2e-14 83.2 144 52.8
DCAR_016295 Daucus carota HOM05D005915 ORTHO05D007239 4.7e-13 79.3 142 46.5
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 4.7e-13 79.3 156 38.5
Actinidia18238 Actinidia chinensis HOM05D005915 ORTHO05D007239 1.4e-12 77.8 73 67.1
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 4.4e-11 72.8 99 41.4
TAR625G0588 Trochodendron aralioides HOM05D005915 ORTHO05D007239 4.4e-11 72.8 83 55.4
Actinidia25450 Actinidia chinensis HOM05D005915 ORTHO05D007239 7.5e-11 72.0 37 89.2
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 1.3e-10 71.2 100 38.0
Lsat_1_v5_gn_9_86741 Lactuca sativa HOM05D005915 ORTHO05D007239 1.1e-09 68.2 82 53.7
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 2.4e-09 67.0 34 94.1
TAR625G0573 Trochodendron aralioides HOM05D005915 ORTHO05D007239 3.1e-09 66.6 107 50.5
Haze_16650 Corylus avellana HOM05D005915 ORTHO05D007239 7.0e-09 65.5 51 58.8
ClCG00G004860 Citrullus lanatus HOM05D005915 ORTHO05D007239 9.1e-09 65.1 79 46.8
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 2.0e-08 63.9 96 46.9


User provided reference genes

Program Settings