Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23264 Davidia involucrata HOM05D006720 ORTHO05D008333 5.1e-159 564.3 274 100.0
CSS0010698 Camellia sinensis var. sinensis HOM05D006720 ORTHO05D008333 2.0e-102 376.3 331 59.5
Lj5C82T14 Lonicera japonica HOM05D006720 ORTHO05D008333 3.7e-101 372.1 343 59.2
Hma1.2p1_0329F.1_g127340 Hydrangea macrophylla HOM05D006720 ORTHO05D008333 4.2e-97 358.6 338 56.8
Actinidia08931 Actinidia chinensis HOM05D006720 ORTHO05D008333 8.3e-93 344.4 333 57.4
vmacro16839 Vaccinium macrocarpon HOM05D006720 ORTHO05D008333 1.6e-88 330.1 337 55.8
Nn8g40120 Nelumbo nucifera HOM05D006720 ORTHO05D008333 5.7e-86 321.6 347 53.0
Haze_16697 Corylus avellana HOM05D006720 ORTHO05D008333 4.6e-83 312.0 381 48.3
TAR383G0893 Trochodendron aralioides HOM05D006720 ORTHO05D008333 8.0e-80 301.2 294 55.4
GSVIVG01016095001 Vitis vinifera HOM05D006720 ORTHO05D008333 1.1e-79 300.8 330 53.0
Gohir.A05G117100 Gossypium hirsutum HOM05D006720 ORTHO05D008333 3.1e-79 299.3 352 48.3
Gohir.D05G118000 Gossypium hirsutum HOM05D006720 ORTHO05D008333 3.1e-79 299.3 352 48.9
Sabra01G0028300 Salix brachista HOM05D006720 ORTHO05D008333 5.2e-79 298.5 338 50.6
Prupe.3G104500 Prunus persica HOM05D006720 ORTHO05D008333 2.0e-78 296.6 343 50.1
Cc04_g05350 Coffea canephora HOM05D006720 ORTHO05D008333 1.3e-77 293.9 350 52.0
Thecc.06G048000 Theobroma cacao HOM05D006720 ORTHO05D008333 1.7e-77 293.5 352 47.2
Gorai.009G121900 Gossypium raimondii HOM05D006720 ORTHO05D008333 2.9e-77 292.7 353 48.7
Eucgr.J03133 Eucalyptus grandis HOM05D006720 ORTHO05D008333 1.9e-76 290.0 335 48.1
Dinv21433 Davidia involucrata HOM05D006720 ORTHO05D008333 3.2e-76 289.3 189 77.8
MD09G1228600 Malus domestica HOM05D006720 ORTHO05D008333 7.0e-76 288.1 352 49.7
Potri.001G041400 Populus trichocarpa HOM05D006720 ORTHO05D008333 1.2e-75 287.3 338 50.3
PGR031G3965 Punica granatum HOM05D006720 ORTHO05D008333 1.6e-75 287.0 341 51.0
Nitab4.5_0002700g0050 Nicotiana tabacum HOM05D006720 ORTHO05D008333 3.5e-75 285.8 346 50.6
Duzib235G0030 Durio zibethinus HOM05D006720 ORTHO05D008333 6.0e-75 285.0 337 47.8
Cfa001847 Carpinus fangiana HOM05D006720 ORTHO05D008333 7.8e-75 284.6 341 49.3
CsaV3_7G031740 Cucumis sativus L. HOM05D006720 ORTHO05D008333 1.0e-74 284.3 337 48.1
QL05p037203 Quercus lobata HOM05D006720 ORTHO05D008333 1.7e-74 283.5 344 50.0
Manes.04G100600 Manihot esculenta HOM05D006720 ORTHO05D008333 3.9e-74 282.3 336 48.2
Sopen03g036640 Solanum pennellii HOM05D006720 ORTHO05D008333 5.0e-74 282.0 341 50.7
COL.COLO4_26788 Corchorus olitorius HOM05D006720 ORTHO05D008333 6.6e-74 281.6 352 46.0
ECA232G3089 Erigeron canadensis HOM05D006720 ORTHO05D008333 1.5e-73 280.4 336 48.5
Peaxi162Scf00314g01027 Petunia axillaris HOM05D006720 ORTHO05D008333 2.5e-73 279.6 342 49.7
CANSAT64G1752 Cannabis sativa HOM05D006720 ORTHO05D008333 4.3e-73 278.9 359 47.1
PGSC0003DMG400014215 Solanum tuberosum HOM05D006720 ORTHO05D008333 4.3e-73 278.9 343 50.1
RcHm_v2.0_Chr2g0132241 Rosa chinensis HOM05D006720 ORTHO05D008333 5.6e-73 278.5 350 47.7
Lsat_1_v5_gn_4_84960 Lactuca sativa HOM05D006720 ORTHO05D008333 7.3e-73 278.1 333 49.8
MSTRG.11219 Avicennia marina HOM05D006720 ORTHO05D008333 9.5e-73 277.7 339 46.3
DCAR_025536 Daucus carota HOM05D006720 ORTHO05D008333 1.2e-72 277.3 343 47.8
Solyc03g117730.3 Solanum lycopersicum HOM05D006720 ORTHO05D008333 2.1e-72 276.6 335 51.6
MBI15_g26073_MAGBIO Magnolia biondii HOM05D006720 ORTHO05D008333 3.6e-72 275.8 343 50.1
ClCG09G003460 Citrullus lanatus HOM05D006720 ORTHO05D008333 6.2e-72 275.0 330 47.6
MELO3C023483.2 Cucumis melo HOM05D006720 ORTHO05D008333 8.1e-72 274.6 298 50.3
FAN02G3506 Fragaria x ananassa HOM05D006720 ORTHO05D008333 1.1e-71 274.2 348 47.4
Nitab4.5_0004738g0030 Nicotiana tabacum HOM05D006720 ORTHO05D008333 1.1e-71 274.2 342 49.1
FAN05G2916 Fragaria x ananassa HOM05D006720 ORTHO05D008333 1.8e-71 273.5 348 47.4
PSO017G2116 Papaver somniferum HOM05D006720 ORTHO05D008333 2.3e-71 273.1 362 45.3
Atru.chr1.2814 Acer truncatum HOM05D006720 ORTHO05D008333 3.1e-71 272.7 370 45.1
FvH4_6g28190 Fragaria vesca HOM05D006720 ORTHO05D008333 2.0e-70 270.0 347 48.1
CiPaw.02G163900 Carya illinoinensis HOM05D006720 ORTHO05D008333 3.4e-70 269.2 239 59.0
PSO170G6385 Papaver somniferum HOM05D006720 ORTHO05D008333 3.4e-70 269.2 360 45.0
Oeu036708.3 Olea europaea HOM05D001135 ORTHO05D008333 4.4e-70 268.9 343 47.2
SGA_v2.0_scaffold5G02836 Striga asiatica HOM05D006720 ORTHO05D008333 7.5e-70 268.1 339 46.6
MD17G1227000 Malus domestica HOM05D006720 ORTHO05D008333 1.7e-69 266.9 348 47.1
HanXRQChr09g0274211 Helianthus annuus HOM05D006720 ORTHO05D008333 1.1e-68 264.2 311 48.9
SalBow7G4111 Salvia bowleyana HOM05D006720 ORTHO05D008333 4.1e-68 262.3 333 44.4
Lalb_Chr14g0376131 Lupinus albus HOM05D006720 ORTHO05D008333 7.1e-68 261.5 336 46.4
CAN.G1008.11 Capsicum annuum HOM05D006720 ORTHO05D008333 8.6e-66 254.6 338 48.8
TWI12G1459 Tripterygium wilfordii HOM05D006720 ORTHO05D008333 8.6e-66 254.6 348 44.5
CSS0024292 Camellia sinensis var. sinensis HOM05D006720 ORTHO05D008333 2.5e-65 253.1 189 67.7
Migut.I00629 Erythranthe guttata HOM05D006720 ORTHO05D008333 4.7e-64 248.8 347 43.5
Sed0009506 Sechium edule HOM05D006720 ORTHO05D008333 5.2e-63 245.4 334 44.0
Rhsim12G0184400 Rhododendron simsii HOM05D006720 ORTHO05D008333 1.3e-61 240.7 196 65.8
AUR62033006 Chenopodium quinoa HOM05D006720 ORTHO05D008333 4.9e-61 238.8 353 41.4
Aqoxy7G02333 Aquilegia oxysepala HOM05D006720 ORTHO05D008333 8.4e-61 238.0 366 43.2
FAN09G3415 Fragaria x ananassa HOM05D006720 ORTHO05D008333 8.4e-61 238.0 294 50.3
Hund06712 Selenicereus undatus HOM05D006720 ORTHO05D008333 2.4e-60 236.5 338 42.0
AUR62034065 Chenopodium quinoa HOM05D006720 ORTHO05D008333 4.1e-60 235.7 354 41.0
EL10Ac8g19413 Beta vulgaris HOM05D006720 ORTHO05D008333 1.6e-59 233.8 354 41.5
FAN14G1194 Fragaria x ananassa HOM05D006720 ORTHO05D008333 7.8e-59 231.5 347 44.4
Manes.11G069900 Manihot esculenta HOM05D006720 ORTHO05D008333 1.5e-57 227.3 283 49.5
Ah.09g231790 Amaranthus hybridus HOM05D001135 ORTHO05D001005 1.9e-57 226.9 359 41.5
arahy.Tifrunner.gnm1.ann1.597RPM Arachis hypogaea HOM05D006720 ORTHO05D008333 4.3e-57 225.7 342 43.3
arahy.Tifrunner.gnm1.ann1.HE2FXA Arachis hypogaea HOM05D006720 ORTHO05D008333 4.3e-57 225.7 342 43.3
Lj3g0009177 Lotus japonicus HOM05D006720 ORTHO05D008333 5.2e-55 218.8 240 50.4
VMungo1080G1475 Vigna mungo HOM05D006720 ORTHO05D008333 2.4e-52 209.9 323 40.9
Phvul.005G183800 Phaseolus vulgaris HOM05D006720 ORTHO05D008333 3.2e-52 209.5 324 41.4
Ca_01005_v3 Cicer arietinum L. HOM05D006720 ORTHO05D008333 4.6e-51 205.7 307 40.4
SEGI_19282 Sequoiadendron giganteum HOM05D006720 ORTHO05D008333 3.6e-48 196.1 331 39.3
Ciclev10026193m.g Citrus clementina HOM05D006720 ORTHO05D008333 1.8e-47 193.7 218 49.5
THA.LOC104812423 Tarenaya hassleriana HOM05D006720 ORTHO05D008333 2.4e-47 193.4 308 39.3
Psat5g308240 Pisum sativum HOM05D006720 ORTHO05D008333 1.2e-46 191.0 339 36.9
Glyma.13G371500 Glycine max HOM05D006720 ORTHO05D008333 2.6e-46 189.9 268 43.3
Sp1g14380 Schrenkiella parvula HOM05D006720 ORTHO05D008333 2.2e-45 186.8 263 41.1
BcaC05g25606 Brassica carinata HOM05D006720 ORTHO05D008333 6.4e-45 185.3 290 38.6
Thhalv10007810m.g Eutrema salsugineum HOM05D006720 ORTHO05D008333 8.4e-45 184.9 292 38.4
Aa31LG7G640 Aethionema arabicum HOM05D006720 ORTHO05D008333 1.1e-44 184.5 282 40.8
C05p14260 Brassica napus HOM05D006720 ORTHO05D008333 1.1e-44 184.5 237 42.2
AT1G16070 Arabidopsis thaliana HOM05D006720 ORTHO05D008333 1.4e-44 184.1 261 40.6
AL1G28230 Arabidopsis lyrata HOM05D006720 ORTHO05D008333 1.9e-44 183.7 261 40.6
CARHR016580 Cardamine hirsuta HOM05D006720 ORTHO05D008333 3.2e-44 183.0 261 39.8
BolC5t30158H Brassica oleracea HOM05D006720 ORTHO05D008333 9.3e-44 181.4 290 37.9
BraA06t24378Z Brassica rapa HOM05D006720 ORTHO05D008333 2.1e-43 180.3 300 38.7
A06p12090 Brassica napus HOM05D006720 ORTHO05D008333 2.7e-43 179.9 300 37.7
Carub.0001s1587 Capsella rubella HOM05D006720 ORTHO05D008333 1.8e-42 177.2 261 38.7
Medtr2g105390 Medicago truncatula HOM05D006720 ORTHO05D008333 1.9e-41 173.7 319 37.3
Zm00001eb233920 Zea mays HOM05D006720 ORTHO05D008333 1.1e-36 157.9 241 42.3
CDE05G1675 Ceratophyllum demersum HOM05D006720 ORTHO05D008333 2.1e-35 153.7 319 36.7
CSS0016662 Camellia sinensis var. sinensis HOM05D006720 ORTHO05D008333 2.7e-35 153.3 92 75.0
Hma1.2p1_0338F.1_g129720 Hydrangea macrophylla HOM05D006720 ORTHO05D008333 8.7e-34 148.3 83 81.9
CDE02G1676 Ceratophyllum demersum HOM05D006720 ORTHO05D008333 8.4e-29 131.7 197 44.7
Rhsim12G0185100 Rhododendron simsii HOM05D006720 ORTHO05D008333 3.2e-28 129.8 96 64.6
HPP92_003070 Vanilla planifolia HOM05D006720 ORTHO05D008333 4.6e-27 125.9 274 37.2
ATR0767G122 Amborella trichopoda HOM05D006720 ORTHO05D008333 3.0e-26 123.2 249 36.5
Dinv21432 Davidia involucrata HOM05D006720 ORTHO05D008333 1.1e-25 121.3 63 84.1
Rhsim12G0184300 Rhododendron simsii HOM05D006720 ORTHO05D008333 1.5e-25 120.9 121 56.2
Os02g0179400 Oryza sativa ssp. japonica HOM05D006720 ORTHO05D008333 3.3e-25 119.8 179 39.7
PGR031G2660 Punica granatum HOM05D006720 ORTHO05D008333 8.5e-21 105.1 95 61.1
SGA_v2.0_scaffold382G50398 Striga asiatica HOM05D006720 ORTHO05D008333 8.5e-21 105.1 115 47.0
Hma1.2p1_0338F.1_g129710 Hydrangea macrophylla HOM05D006720 ORTHO05D008333 1.4e-20 104.4 67 70.1
Psat3g139560 Pisum sativum HOM05D006720 ORTHO05D008333 3.0e-18 96.7 80 53.8
SMO137G0108 Selaginella moellendorffii HOM05D006720 ORTHO05D008333 1.1e-17 94.7 198 32.8
AagrBONN_evm.TU.Sc2ySwM_368.1228 Anthoceros agrestis HOM05D006720 ORTHO05D008333 4.3e-17 92.8 200 31.5
Sc10g0008450 Simmondsia chinensis HOM05D006720 ORTHO05D008333 5.7e-17 92.4 83 51.8
BcaB02g06589 Brassica carinata HOM05D006720 ORTHO05D008333 2.8e-16 90.1 297 29.3
Potri.003G185401 Populus trichocarpa HOM05D006720 ORTHO05D008333 8.2e-16 88.6 79 54.4
Oeu023309.1 Olea europaea HOM05D006720 ORTHO05D008333 2.4e-15 87.0 76 55.3
CBR_g4400 Chara braunii HOM05D006720 ORTHO05D008333 2.7e-11 73.6 246 24.8
AagrBONN_evm.TU.Sc2ySwM_362.1577 Anthoceros agrestis HOM05D006720 ORTHO05D008333 1.2e-06 58.2 173 27.2


User provided reference genes

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