Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23254 Davidia involucrata HOM05D008232 ORTHO05D010390 4.0e-53 211.1 99 100.0
Migut.I00645 Erythranthe guttata HOM05D008232 ORTHO05D010390 2.0e-28 129.0 103 68.0
Peaxi162Scf00207g00211 Petunia axillaris HOM05D005461 ORTHO05D007157 2.9e-27 125.2 100 62.0
Prupe.3G107800 Prunus persica HOM05D008232 ORTHO05D010390 1.2e-25 119.8 100 60.0
Solyc06g068660.3 Solanum lycopersicum HOM05D008232 ORTHO05D010390 1.6e-25 119.4 97 57.7
Sopen06g025940 Solanum pennellii HOM05D008232 ORTHO05D010390 1.6e-25 119.4 97 57.7
FAN14G2943 Fragaria x ananassa HOM05D008232 ORTHO05D010390 5.0e-24 114.4 99 60.6
FvH4_6g27930 Fragaria vesca HOM05D008232 ORTHO05D010390 6.6e-24 114.0 99 60.6
Oeu036452.1 Olea europaea HOM05D008232 ORTHO05D010390 6.6e-24 114.0 97 55.7
FAN02G3893 Fragaria x ananassa HOM05D008232 ORTHO05D010390 3.3e-23 111.7 99 59.6
Potri.010G248600 Populus trichocarpa HOM05D008232 ORTHO05D010390 3.3e-23 111.7 95 57.9
MD09G1231600 Malus domestica HOM05D008232 ORTHO05D010390 2.1e-22 109.0 96 55.2
Nitab4.5_0004890g0010 Nicotiana tabacum HOM05D008232 ORTHO05D010390 4.7e-22 107.8 86 62.8
FAN05G2300 Fragaria x ananassa HOM05D008232 ORTHO05D010390 6.2e-22 107.5 99 57.6
QL04p062033 Quercus lobata HOM05D008232 ORTHO05D010390 6.2e-22 107.5 95 56.8
Eucgr.J03142 Eucalyptus grandis HOM05D008232 ORTHO05D010390 8.0e-22 107.1 100 54.0
CiPaw.03G112900 Carya illinoinensis HOM05D008232 ORTHO05D010390 3.1e-21 105.1 97 56.7
PGR031G2543 Punica granatum HOM05D008232 ORTHO05D010390 8.9e-21 103.6 96 51.0
FAN09G3435 Fragaria x ananassa HOM05D008232 ORTHO05D010390 5.8e-20 100.9 92 57.6
HanXRQChr09g0274311 Helianthus annuus HOM05D008232 ORTHO05D010390 9.8e-20 100.1 96 54.2
SalBow7G0137 Salvia bowleyana HOM05D008232 ORTHO05D010390 2.2e-19 99.0 80 61.2
Duzib235G0354 Durio zibethinus HOM05D008232 ORTHO05D010390 2.9e-19 98.6 96 51.0
Lsat_1_v5_gn_4_85220 Lactuca sativa HOM05D008232 ORTHO05D010390 2.9e-19 98.6 97 54.6
Cc04_g05510 Coffea canephora HOM05D000169 ORTHO05D001214 3.7e-19 98.2 86 57.0
Thecc.06G043900 Theobroma cacao HOM05D000051 ORTHO05D000015 3.2e-18 95.1 95 50.5
RcHm_v2.0_Chr2g0131491 Rosa chinensis HOM05D008232 ORTHO05D010390 1.2e-17 93.2 85 57.6
Atru.chr1.2756 Acer truncatum HOM05D008232 ORTHO05D010390 6.0e-17 90.9 103 50.5
Ciclev10026814m.g Citrus clementina HOM05D008232 ORTHO05D010390 7.8e-17 90.5 103 45.6
Actinidia08925 Actinidia chinensis HOM05D008232 ORTHO05D010390 2.3e-16 89.0 88 55.7
TWI31G1109 Tripterygium wilfordii HOM05D008232 ORTHO05D010390 3.9e-16 88.2 101 48.5
AT1G73120 Arabidopsis thaliana HOM05D008232 ORTHO05D010390 5.0e-16 87.8 102 54.9
BraA07t31461Z Brassica rapa HOM05D008232 ORTHO05D010390 5.0e-16 87.8 103 53.4
Cfa023521 Carpinus fangiana HOM05D008232 ORTHO05D010390 6.6e-16 87.4 78 60.3
AL2G32870 Arabidopsis lyrata HOM05D008232 ORTHO05D010390 8.6e-16 87.0 102 54.9
BolC6t39770H Brassica oleracea HOM05D008232 ORTHO05D010390 8.6e-16 87.0 103 52.4
Thhalv10019346m.g Eutrema salsugineum HOM05D008232 ORTHO05D010390 8.6e-16 87.0 102 53.9
A07p39100 Brassica napus HOM05D008232 ORTHO05D010390 1.1e-15 86.7 103 52.4
C06p47310 Brassica napus HOM05D008232 ORTHO05D010390 1.1e-15 86.7 103 52.4
CARHR066090 Cardamine hirsuta HOM05D008232 ORTHO05D010390 1.1e-15 86.7 101 54.5
Sp5g28080 Schrenkiella parvula HOM05D008232 ORTHO05D010390 1.9e-15 85.9 102 52.9
Carub.0002s1989 Capsella rubella HOM05D008232 ORTHO05D010390 1.2e-14 83.2 102 52.9
COL.COLO4_26749 Corchorus olitorius HOM05D008232 ORTHO05D010390 1.2e-14 83.2 75 53.3
THA.LOC104813941 Tarenaya hassleriana HOM05D008232 ORTHO05D010390 1.6e-14 82.8 79 55.7
TAR383G0592 Trochodendron aralioides HOM05D008232 ORTHO05D010390 6.2e-14 80.9 99 42.4
CANSAT64G1479 Cannabis sativa HOM05D008232 ORTHO05D010390 8.1e-14 80.5 112 45.5
Sed0014962 Sechium edule HOM05D008232 ORTHO05D010390 8.1e-14 80.5 102 43.1
C02p30580 Brassica napus HOM05D008232 ORTHO05D010390 1.8e-13 79.3 89 49.4
A02p18450 Brassica napus HOM05D008232 ORTHO05D010390 2.3e-13 79.0 104 46.2
BraA02t06884Z Brassica rapa HOM05D008232 ORTHO05D010390 2.3e-13 79.0 104 46.2
Aa31LG4G3390 Aethionema arabicum HOM05D008232 ORTHO05D010390 1.2e-12 76.6 85 51.8
CsaV3_4G007020 Cucumis sativus L. HOM05D008232 ORTHO05D010390 2.0e-12 75.9 86 45.3
MELO3C016243.2 Cucumis melo HOM05D008232 ORTHO05D010390 2.6e-12 75.5 86 45.3
Gohir.A05G117900 Gossypium hirsutum HOM05D008232 ORTHO05D010390 9.9e-12 73.6 97 42.3
PSO782G2603 Papaver somniferum HOM05D008232 ORTHO05D010390 9.9e-12 73.6 86 41.9
Manes.06G016400 Manihot esculenta HOM05D008232 ORTHO05D010390 1.3e-11 73.2 104 46.2
Gohir.D05G118800 Gossypium hirsutum HOM05D008232 ORTHO05D010390 1.7e-11 72.8 97 42.3
Gorai.009G122800 Gossypium raimondii HOM05D008232 ORTHO05D010390 2.2e-11 72.4 97 42.3
Aqoxy7G03060 Aquilegia oxysepala HOM05D008232 ORTHO05D010390 3.7e-11 71.6 85 43.5
Cpa.g.sc2471.1 Carica papaya HOM05D008232 ORTHO05D010390 1.4e-10 69.7 79 48.1
Sc10g0006420 Simmondsia chinensis HOM05D008232 ORTHO05D010390 3.2e-10 68.6 97 43.3
PSO478G5163 Papaver somniferum HOM05D008232 ORTHO05D010390 4.1e-10 68.2 91 44.0
Hund22378 Selenicereus undatus HOM05D008232 ORTHO05D010390 1.6e-09 66.2 104 38.5
Sc10g0006360 Simmondsia chinensis HOM05D008232 ORTHO05D010390 4.6e-09 64.7 97 41.2
ClCG07G011230 Citrullus lanatus HOM05D008232 ORTHO05D010390 5.1e-08 61.2 69 42.0
PGSC0003DMG400028930 Solanum tuberosum HOM05D008232 ORTHO05D010390 4.3e-07 58.2 42 66.7
Aa31LG8G6290 Aethionema arabicum HOM05D006153 ORTHO05D007701 3.6e-06 55.1 49 51.0


User provided reference genes

Program Settings