Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23186 Davidia involucrata HOM05D005105 ORTHO05D006244 1.3e-102 376.3 188 100.0
Actinidia18329 Actinidia chinensis HOM05D005105 ORTHO05D006244 9.2e-51 204.1 167 65.3
TAR629G0447 Trochodendron aralioides HOM05D005105 ORTHO05D006244 6.4e-44 181.4 174 60.3
Lsat_1_v5_gn_5_10960 Lactuca sativa HOM05D005105 ORTHO05D006244 8.6e-41 171.0 180 58.3
GSVIVG01008594001 Vitis vinifera HOM05D005105 ORTHO05D006244 5.6e-40 168.3 185 55.7
MD09G1007000 Malus domestica HOM05D005105 ORTHO05D006244 1.1e-38 164.1 162 57.4
HanXRQChr05g0155591 Helianthus annuus HOM05D005105 ORTHO05D006244 1.8e-38 163.3 173 57.2
TWI34G1796 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 2.3e-38 162.9 174 52.9
Oeu020395.1 Olea europaea HOM05D005105 ORTHO05D006244 3.1e-38 162.5 162 57.4
Prupe.3G310100 Prunus persica HOM05D005105 ORTHO05D006244 3.1e-38 162.5 158 57.0
Nn3g16360 Nelumbo nucifera HOM05D005105 ORTHO05D006244 6.8e-38 161.4 163 59.5
Manes.04G087600 Manihot esculenta HOM05D005105 ORTHO05D006244 2.0e-37 159.8 180 52.2
QL02p070577 Quercus lobata HOM05D005105 ORTHO05D006244 2.0e-37 159.8 163 55.8
Atru.chr6.2612 Acer truncatum HOM05D005105 ORTHO05D006244 3.4e-37 159.1 181 55.2
Actinidia36228 Actinidia chinensis HOM05D005105 ORTHO05D006244 4.4e-37 158.7 165 57.0
Cpa.g.sc70.110 Carica papaya HOM05D005105 ORTHO05D006244 1.3e-36 157.1 167 53.9
Solyc02g082210.4 Solanum lycopersicum HOM05D005105 ORTHO05D006244 1.3e-36 157.1 157 54.8
Nitab4.5_0011381g0040 Nicotiana tabacum HOM05D005105 ORTHO05D006244 3.2e-35 152.5 153 58.8
vmacro19146 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 4.1e-35 152.1 227 44.9
Lsat_1_v5_gn_0_23961 Lactuca sativa HOM05D005105 ORTHO05D006244 5.4e-35 151.8 171 51.5
HanXRQChr17g0551611 Helianthus annuus HOM05D005105 ORTHO05D006244 9.2e-35 151.0 157 54.8
FAN14G3030 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.6e-34 150.2 163 51.5
Glyma.02G065000 Glycine max HOM05D005105 ORTHO05D006244 1.6e-34 150.2 160 55.6
Potri.001G325500 Populus trichocarpa HOM05D005105 ORTHO05D006244 1.6e-34 150.2 159 54.7
FAN02G1943 Fragaria x ananassa HOM05D005105 ORTHO05D006244 2.7e-34 149.4 165 50.9
TWI60G0613 Tripterygium wilfordii HOM05D005105 ORTHO05D006244 2.7e-34 149.4 163 52.8
FAN09G0463 Fragaria x ananassa HOM05D005105 ORTHO05D006244 3.5e-34 149.1 165 50.9
Peaxi162Scf00331g00014 Petunia axillaris HOM05D005105 ORTHO05D006244 3.5e-34 149.1 159 51.6
Lalb_Chr00c40g0412501 Lupinus albus HOM05D005105 ORTHO05D006244 4.6e-34 148.7 176 51.7
Cfa007197 Carpinus fangiana HOM05D005105 ORTHO05D006244 6.0e-34 148.3 164 54.9
PSO017G6125 Papaver somniferum HOM05D005105 ORTHO05D006244 6.0e-34 148.3 157 55.4
ClCG01G008700 Citrullus lanatus HOM05D005105 ORTHO05D006244 7.8e-34 147.9 94 78.7
Duzib264G1310 Durio zibethinus HOM05D005105 ORTHO05D006244 1.0e-33 147.5 176 53.4
PSO063G6475 Papaver somniferum HOM05D005105 ORTHO05D006244 1.0e-33 147.5 157 55.4
Aqoxy5G03244_Aqoxy5G03245 Aquilegia oxysepala HOM05D005105 ORTHO05D006244 1.3e-33 147.1 157 57.3
PSO478G4366 Papaver somniferum HOM05D005105 ORTHO05D006244 1.3e-33 147.1 157 55.4
Cc07_g01060 Coffea canephora HOM05D005105 ORTHO05D006244 1.7e-33 146.7 156 55.1
SGA_v2.0_scaffold253G45172 Striga asiatica HOM05D005105 ORTHO05D006244 1.7e-33 146.7 173 48.6
EL10Ac6g15451 Beta vulgaris HOM05D005105 ORTHO05D006244 3.0e-33 146.0 176 47.2
Glyma.16G146100 Glycine max HOM05D005105 ORTHO05D006244 3.0e-33 146.0 160 53.1
THA.LOC104825638 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 3.9e-33 145.6 159 55.3
CANSAT21G1015 Cannabis sativa HOM05D005105 ORTHO05D006244 8.6e-33 144.4 171 49.7
DCAR_015209 Daucus carota HOM05D005105 ORTHO05D006244 8.6e-33 144.4 173 50.3
Thecc.04G041900 Theobroma cacao HOM05D005105 ORTHO05D006244 8.6e-33 144.4 179 53.1
CiPaw.03G004800 Carya illinoinensis HOM05D005105 ORTHO05D006244 1.1e-32 144.1 139 59.7
Gohir.D09G039801 Gossypium hirsutum HOM05D005105 ORTHO05D006244 1.1e-32 144.1 175 52.6
Glyma.16G052500 Glycine max HOM05D005105 ORTHO05D006244 1.5e-32 143.7 167 49.7
Ah.03g148260 Amaranthus hybridus HOM05D005105 ORTHO05D006244 1.9e-32 143.3 93 74.2
AUR62003394 Chenopodium quinoa HOM05D005105 ORTHO05D006244 2.5e-32 142.9 93 74.2
ECA246G4542 Erigeron canadensis HOM05D005105 ORTHO05D006244 2.5e-32 142.9 155 56.1
Gorai.001G274700 Gossypium raimondii HOM05D005105 ORTHO05D006244 3.3e-32 142.5 165 53.9
MELO3C025087.2 Cucumis melo HOM05D005105 ORTHO05D006244 4.3e-32 142.1 114 65.8
RcHm_v2.0_Chr2g0176111 Rosa chinensis HOM05D005105 ORTHO05D006244 4.3e-32 142.1 179 47.5
Gohir.D07G238700 Gossypium hirsutum HOM05D005105 ORTHO05D006244 9.5e-32 141.0 165 53.3
Duzib147G0369 Durio zibethinus HOM05D005105 ORTHO05D006244 1.2e-31 140.6 176 51.7
Sc09g0007730 Simmondsia chinensis HOM05D005105 ORTHO05D006244 1.6e-31 140.2 148 56.1
COL.COLO4_13307 Corchorus olitorius HOM05D005105 ORTHO05D006244 2.1e-31 139.8 93 75.3
Prupe.3G297400 Prunus persica HOM05D005105 ORTHO05D006244 3.6e-31 139.0 143 54.5
GSVIVG01033038001 Vitis vinifera HOM05D005105 ORTHO05D006244 4.7e-31 138.7 130 60.8
PGR142G1816 Punica granatum HOM05D005105 ORTHO05D006244 6.2e-31 138.3 168 50.0
Ciclev10014761m.g Citrus clementina HOM05D005105 ORTHO05D006244 8.1e-31 137.9 90 75.6
Gohir.A07G231500 Gossypium hirsutum HOM05D005105 ORTHO05D006244 8.1e-31 137.9 165 52.7
Medtr7g026520 Medicago truncatula HOM05D005105 ORTHO05D006244 1.1e-30 137.5 174 50.6
ATR0582G106 Amborella trichopoda HOM05D005105 ORTHO05D006244 1.4e-30 137.1 92 75.0
arahy.Tifrunner.gnm1.ann1.JMV5LB Arachis hypogaea HOM05D005105 ORTHO05D006244 1.4e-30 137.1 185 45.4
Lj1g0026609 Lotus japonicus HOM05D005105 ORTHO05D006244 1.4e-30 137.1 167 48.5
Phvul.001G090000 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 1.4e-30 137.1 167 50.3
Rhsim08G0041000 Rhododendron simsii HOM05D005105 ORTHO05D006244 1.4e-30 137.1 156 53.2
BraA06t27085Z Brassica rapa HOM05D005105 ORTHO05D006244 1.8e-30 136.7 160 51.2
FAN05G2765 Fragaria x ananassa HOM05D005105 ORTHO05D006244 1.8e-30 136.7 185 45.9
Sed0022814 Sechium edule HOM05D005105 ORTHO05D006244 1.8e-30 136.7 93 75.3
Os11g0507400 Oryza sativa ssp. japonica HOM05D005105 ORTHO05D006244 3.1e-30 136.0 144 55.6
AL5G15980 Arabidopsis lyrata HOM05D005105 ORTHO05D006244 4.0e-30 135.6 144 54.9
C07p36060 Brassica napus HOM05D005105 ORTHO05D006244 4.0e-30 135.6 161 51.6
Carub.0005s0514 Capsella rubella HOM05D005105 ORTHO05D006244 4.0e-30 135.6 144 53.5
SalBow4G0131 Salvia bowleyana HOM05D005105 ORTHO05D006244 4.0e-30 135.6 180 49.4
Migut.F00035 Erythranthe guttata HOM05D005105 ORTHO05D006244 5.2e-30 135.2 157 50.3
CsaV3_5G024330 Cucumis sativus L. HOM05D005105 ORTHO05D006244 6.8e-30 134.8 111 65.8
Gohir.A09G038300 Gossypium hirsutum HOM05D005105 ORTHO05D006244 2.0e-29 133.3 166 51.8
Gorai.006G044700 Gossypium raimondii HOM05D005105 ORTHO05D006244 2.0e-29 133.3 159 52.2
Lj2g0026571 Lotus japonicus HOM05D005105 ORTHO05D006244 2.0e-29 133.3 168 50.6
Sp2g16080 Schrenkiella parvula HOM05D005105 ORTHO05D006244 3.4e-29 132.5 172 50.0
VMungo0464G0185 Vigna mungo HOM05D005105 ORTHO05D006244 3.4e-29 132.5 93 69.9
BcaC06g31032 Brassica carinata HOM05D005105 ORTHO05D006244 4.4e-29 132.1 144 52.8
AT3G26950 Arabidopsis thaliana HOM05D005105 ORTHO05D006244 5.8e-29 131.7 144 53.5
THA.LOC104805319 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 5.8e-29 131.7 164 51.2
DCAR_007509 Daucus carota HOM05D005105 ORTHO05D006244 1.3e-28 130.6 139 55.4
Glyma.19G097001 Glycine max HOM05D005105 ORTHO05D006244 2.9e-28 129.4 103 65.0
Haze_14911 Corylus avellana HOM05D005105 ORTHO05D006244 3.8e-28 129.0 153 52.3
HPP92_009897 Vanilla planifolia HOM05D005105 ORTHO05D006244 3.8e-28 129.0 93 68.8
Atru.chr6.2614 Acer truncatum HOM05D005105 ORTHO05D006244 6.4e-28 128.3 90 70.0
Psat3g181600 Pisum sativum HOM05D005105 ORTHO05D006244 8.4e-28 127.9 174 48.3
HPP92_009881 Vanilla planifolia HOM05D005105 ORTHO05D006244 8.4e-28 127.9 93 67.7
Thhalv10003939m.g Eutrema salsugineum HOM05D005105 ORTHO05D006244 2.4e-27 126.3 171 49.7
VMungo1383G1917 Vigna mungo HOM05D005105 ORTHO05D006244 7.1e-27 124.8 164 47.6
CDE06G1277 Ceratophyllum demersum HOM05D005105 ORTHO05D006244 2.1e-26 123.2 91 67.0
FAN05G0264 Fragaria x ananassa HOM05D005105 ORTHO05D006244 2.1e-26 123.2 146 48.6
SHI04027 Sapria himalayana HOM05D005105 ORTHO05D006244 3.5e-26 122.5 182 45.1
Dinv33310 Davidia involucrata HOM05D005105 ORTHO05D006244 4.6e-26 122.1 140 47.9
AUR62029433 Chenopodium quinoa HOM05D005105 ORTHO05D006244 1.3e-25 120.6 92 66.3
Lj7A613T64 Lonicera japonica HOM05D005105 ORTHO05D006244 1.7e-25 120.2 195 43.6
Ca_07318_v3 Cicer arietinum L. HOM05D005105 ORTHO05D006244 3.9e-25 119.0 168 44.0
arahy.Tifrunner.gnm1.ann1.B1CDD0 Arachis hypogaea HOM05D005105 ORTHO05D006244 1.2e-23 114.0 172 41.9
A06p41600 Brassica napus HOM05D005105 ORTHO05D006244 4.7e-23 112.1 147 46.9
Sabra16G0208000 Salix brachista HOM05D005105 ORTHO05D006244 8.1e-23 111.3 159 43.4
BcaC06g33873 Brassica carinata HOM05D005105 ORTHO05D006244 2.4e-22 109.8 148 47.3
BolC7t44120H Brassica oleracea HOM05D005105 ORTHO05D006244 6.9e-22 108.2 148 46.6
Pp3c21_14570 Physcomitrium patens HOM05D005105 ORTHO05D006244 9.9e-21 104.4 88 60.2
AagrBONN_evm.TU.Sc2ySwM_340.35 Anthoceros agrestis HOM05D005105 ORTHO05D006244 2.2e-20 103.2 90 57.8
Pp3c1_35010 Physcomitrium patens HOM05D005105 ORTHO05D006244 1.6e-18 97.1 95 54.7
Aa31LG2G5630 Aethionema arabicum HOM05D005105 ORTHO05D006244 4.6e-18 95.5 139 43.2
unitig_0.g1913 Utricularia gibba HOM05D005105 ORTHO05D006244 6.0e-18 95.1 61 72.1
Nitab4.5_0011717g0030 Nicotiana tabacum HOM05D005105 ORTHO05D006244 1.0e-17 94.4 152 44.7
Phvul.004G070700 Phaseolus vulgaris HOM05D005105 ORTHO05D006244 2.3e-17 93.2 139 43.2
Lj5A92G45 Lonicera japonica HOM05D005105 ORTHO05D006244 3.9e-17 92.4 75 61.3
ECA246G1012 Erigeron canadensis HOM05D005105 ORTHO05D006244 5.6e-16 88.6 135 45.9
THA.LOC104813335 Tarenaya hassleriana HOM05D005105 ORTHO05D006244 2.8e-15 86.3 57 73.7
vmacro18364 Vaccinium macrocarpon HOM05D005105 ORTHO05D006244 4.8e-15 85.5 210 33.8
SMO180G0002 Selaginella moellendorffii HOM05D005105 ORTHO05D006244 1.4e-14 84.0 57 68.4
CSS0040735 Camellia sinensis var. sinensis HOM05D005105 ORTHO05D006244 2.3e-09 66.6 119 43.7


User provided reference genes

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