Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23168 Davidia involucrata HOM05D008631 ORTHO05D010718 2.8e-132 475.3 248 100.0
QL10p002471 Quercus lobata HOM05D008631 ORTHO05D010718 4.2e-43 179.1 253 49.0
Cfa018774 Carpinus fangiana HOM05D008631 ORTHO05D010718 3.3e-40 169.5 249 47.8
TAR629G0833 Trochodendron aralioides HOM05D008631 ORTHO05D010718 3.3e-40 169.5 247 46.6
Haze_07165 Corylus avellana HOM05D008631 ORTHO05D010718 1.9e-35 153.7 252 47.2
Manes.14G049400 Manihot esculenta HOM05D008631 ORTHO05D010718 3.0e-33 146.4 238 43.7
Potri.012G100900 Populus trichocarpa HOM05D008631 ORTHO05D010718 1.9e-32 143.7 253 45.5
Thecc.03G132000 Theobroma cacao HOM05D008631 ORTHO05D010718 1.1e-30 137.9 206 46.6
CiPaw.12G044800 Carya illinoinensis HOM05D008631 ORTHO05D010718 3.8e-28 129.4 249 39.4
MD06G1138600 Malus domestica HOM05D008631 ORTHO05D010718 1.1e-27 127.9 255 43.1
Gorai.008G207200 Gossypium raimondii HOM05D008631 ORTHO05D010718 2.5e-27 126.7 233 42.5
Actinidia18339 Actinidia chinensis HOM05D004514 ORTHO05D005147 1.6e-26 124.0 179 44.7
FAN18G4587 Fragaria x ananassa HOM05D008631 ORTHO05D010718 2.1e-26 123.6 232 43.1
Manes.06G121100 Manihot esculenta HOM05D008631 ORTHO05D010718 2.7e-26 123.2 253 40.3
Prupe.5G148800 Prunus persica HOM05D008631 ORTHO05D010718 2.7e-26 123.2 238 46.6
FvH4_5g08620 Fragaria vesca HOM05D008631 ORTHO05D010718 4.6e-26 122.5 232 42.7
Gohir.D12G192650 Gossypium hirsutum HOM05D008631 ORTHO05D010718 6.1e-26 122.1 233 42.1
FAN08G1367 Fragaria x ananassa HOM05D008631 ORTHO05D010718 1.3e-25 120.9 248 39.5
Nn3g16411 Nelumbo nucifera HOM05D008631 ORTHO05D010718 2.3e-25 120.2 246 39.0
FAN13G1892 Fragaria x ananassa HOM05D008631 ORTHO05D010718 3.0e-25 119.8 232 42.2
MD14G1154600 Malus domestica HOM05D008631 ORTHO05D010718 5.1e-25 119.0 246 43.1
Nn4g22271 Nelumbo nucifera HOM05D008631 ORTHO05D010718 6.7e-25 118.6 245 37.1
FAN04G0039 Fragaria x ananassa HOM05D008631 ORTHO05D010718 2.5e-24 116.7 182 47.3
MSTRG.11267 Avicennia marina HOM05D008631 ORTHO05D010718 5.3e-22 109.0 238 39.5
RcHm_v2.0_Chr7g0189791 Rosa chinensis HOM05D008631 ORTHO05D010718 1.2e-21 107.8 229 39.7
Peaxi162Scf01390g00006 Petunia axillaris HOM05D008631 ORTHO05D010718 4.5e-21 105.9 250 38.0
Potri.015G099100 Populus trichocarpa HOM05D008631 ORTHO05D010718 1.0e-20 104.8 206 42.2
Atru.chr6.1827 Acer truncatum HOM05D008631 ORTHO05D010718 3.8e-20 102.8 228 40.8
Haze_07166 Corylus avellana HOM05D008631 ORTHO05D010718 5.0e-20 102.4 236 36.4
Sabra15G0120000 Salix brachista HOM05D008631 ORTHO05D010718 4.2e-19 99.4 190 40.0
Gohir.A12G190350 Gossypium hirsutum HOM05D008631 ORTHO05D010718 5.5e-19 99.0 194 42.8
Migut.I00551 Erythranthe guttata HOM05D008631 ORTHO05D010718 7.9e-18 95.1 259 33.6
Cfa018773 Carpinus fangiana HOM05D008631 ORTHO05D010718 3.0e-17 93.2 149 47.7
COL.COLO4_06540 Corchorus olitorius HOM05D008631 ORTHO05D010718 2.4e-14 83.6 107 52.3
Solyc03g019740.1 Solanum lycopersicum HOM05D008631 ORTHO05D010718 6.5e-12 75.5 248 33.1
Ciclev10032814m.g Citrus clementina HOM05D008631 ORTHO05D010718 8.5e-12 75.1 233 34.8
Glyma.04G197200 Glycine max HOM05D008631 ORTHO05D010718 6.1e-10 68.9 182 35.7
Phvul.009G165000 Phaseolus vulgaris HOM05D008631 ORTHO05D010718 2.3e-09 67.0 242 31.8
TPR.G14221 Trifolium pratense HOM05D008631 ORTHO05D010718 2.0e-08 63.9 103 41.7
VMungo1309G1529 Vigna mungo HOM05D008631 ORTHO05D010718 2.0e-08 63.9 154 33.8
Lsat_1_v5_gn_1_33001 Lactuca sativa HOM05D008631 ORTHO05D010718 3.3e-08 63.2 236 27.5
Peaxi162Scf00089g00016 Petunia axillaris HOM05D008631 ORTHO05D010718 4.1e-06 56.2 99 39.4


User provided reference genes

Program Settings