Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 4.0e-125 451.4 228 100.0
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 2.2e-99 365.9 229 82.5
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 2.0e-92 342.8 229 79.0
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 4.5e-92 341.7 228 79.8
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 1.7e-91 339.7 229 79.5
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 3.9e-88 328.6 230 76.5
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 9.6e-87 323.9 221 75.6
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 6.2e-86 321.2 230 74.3
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 1.1e-85 320.5 228 73.2
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 1.4e-85 320.1 229 73.4
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 2.0e-84 316.2 229 73.4
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 5.8e-84 314.7 228 73.7
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 7.6e-84 314.3 228 72.8
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 7.6e-84 314.3 231 71.4
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 6.5e-83 311.2 231 72.7
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 2.5e-82 309.3 221 73.3
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 4.2e-82 308.5 213 74.2
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 5.5e-82 308.1 219 73.1
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 2.1e-81 306.2 239 73.2
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 2.7e-81 305.8 239 72.4
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 3.5e-81 305.4 226 71.2
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 3.0e-80 302.4 221 70.1
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 5.1e-80 301.6 228 71.5
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 5.1e-80 301.6 213 71.4
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 6.7e-80 301.2 220 70.5
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 6.7e-80 301.2 229 71.2
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 1.1e-79 300.4 205 73.7
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 1.9e-79 299.7 205 73.2
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 3.3e-79 298.9 215 73.0
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 3.3e-79 298.9 228 68.4
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 4.3e-79 298.5 213 70.9
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 4.3e-79 298.5 213 70.9
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 9.7e-79 297.4 283 62.5
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.6e-78 296.6 209 75.6
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 1.6e-78 296.6 184 78.3
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.8e-77 293.1 213 70.4
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 1.8e-77 293.1 196 75.5
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 2.4e-77 292.7 227 69.6
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 3.1e-77 292.4 224 70.1
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 2.6e-76 289.3 224 68.3
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 3.4e-76 288.9 233 69.5
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 3.4e-76 288.9 216 70.8
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 5.9e-76 288.1 234 64.1
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 1.3e-75 287.0 186 77.4
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 1.3e-75 287.0 187 77.0
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 1.7e-75 286.6 221 71.9
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 1.7e-75 286.6 209 72.2
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.7e-75 286.6 226 66.4
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 3.8e-75 285.4 229 67.2
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 7.2e-74 281.2 219 69.9
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 2.1e-73 279.6 236 65.3
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 3.6e-73 278.9 230 64.3
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 4.6e-73 278.5 188 75.0
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 7.9e-73 277.7 189 74.1
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 1.8e-72 276.6 196 73.0
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 5.1e-72 275.0 219 66.7
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 1.5e-71 273.5 171 78.9
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 2.0e-71 273.1 172 79.7
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 2.5e-71 272.7 228 64.0
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 3.3e-71 272.3 226 63.7
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 1.7e-70 270.0 229 65.9
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 3.7e-70 268.9 189 74.6
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 1.4e-69 266.9 209 67.0
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 5.3e-69 265.0 226 61.5
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 4.5e-68 261.9 241 61.8
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 1.7e-67 260.0 233 63.1
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 1.7e-67 260.0 188 71.3
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 3.8e-67 258.8 168 76.2
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 1.1e-66 257.3 178 74.7
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 3.2e-66 255.8 219 63.5
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 7.2e-66 254.6 190 67.4
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 1.6e-65 253.4 223 62.3
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 2.7e-65 252.7 222 62.2
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 3.6e-65 252.3 212 65.6
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 1.4e-64 250.4 256 56.6
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 3.9e-64 248.8 222 61.3
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 8.8e-64 247.7 214 66.4
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 1.1e-63 247.3 203 65.5
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 1.3e-62 243.8 252 56.0
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 1.7e-62 243.4 233 58.8
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 3.7e-62 242.3 239 57.3
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 4.8e-62 241.9 189 67.7
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 4.8e-62 241.9 173 70.5
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 6.3e-62 241.5 199 65.8
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 1.5e-60 236.9 232 58.6
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 2.0e-60 236.5 221 61.1
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 2.0e-60 236.5 221 61.1
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 2.2e-59 233.0 203 59.1
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 1.5e-58 230.3 137 81.8
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 4.2e-58 228.8 230 57.4
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 9.4e-50 201.1 189 61.4
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 2.3e-40 169.9 98 82.7
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 3.0e-40 169.5 155 58.1
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 5.7e-39 165.2 98 79.6
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 7.5e-39 164.9 136 66.2
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 9.1e-37 157.9 182 48.4
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 5.9e-36 155.2 118 72.9
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 2.3e-35 153.3 159 52.8
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 2.9e-35 152.9 155 57.4
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 3.4e-31 139.4 128 62.5
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 5.7e-31 138.7 152 48.0
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 6.1e-25 118.6 111 52.3
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 1.5e-23 114.0 64 81.2
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 1.5e-23 114.0 63 85.7
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 2.2e-22 110.2 143 52.4
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 5.0e-19 99.0 102 57.8
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 4.4e-15 85.9 61 72.1
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 8.3e-14 81.6 105 50.5
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 8.3e-14 81.6 59 66.1
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 7.1e-13 78.6 61 65.6
PRCOL_00005130 Prasinoderma coloniale HOM05D003314 ORTHO05D004164 4.7e-09 65.9 92 38.0
MCO03G440 Micromonas commoda HOM05D007115 ORTHO05D008923 2.3e-08 63.5 157 31.2
FAN04G0070 Fragaria x ananassa HOM05D007115 ORTHO05D008923 7.6e-07 58.5 47 59.6


User provided reference genes

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