Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 1.7e-55 219.5 150 100.0
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 1.5e-32 143.3 108 72.2
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 4.2e-30 135.2 118 71.2
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 1.1e-27 127.1 115 65.2
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 9.6e-27 124.0 112 69.6
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 2.1e-26 122.9 115 61.7
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 2.8e-26 122.5 115 64.3
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 8.2e-26 120.9 120 61.7
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 1.4e-25 120.2 119 63.0
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 1.8e-25 119.8 117 62.4
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 1.8e-25 119.8 114 64.9
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 2.4e-25 119.4 119 63.0
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 4.0e-25 118.6 113 63.7
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 5.3e-25 118.2 114 65.8
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 9.0e-25 117.5 122 60.7
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 2.0e-24 116.3 115 60.9
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 3.4e-24 115.5 119 58.8
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.0e-23 114.0 116 60.3
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 3.8e-23 112.1 118 60.2
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 1.4e-22 110.2 115 58.3
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 4.2e-22 108.6 118 60.2
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 5.5e-22 108.2 133 55.6
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 7.1e-22 107.8 118 55.1
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 7.1e-22 107.8 118 55.1
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 9.3e-22 107.5 121 57.9
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 9.3e-22 107.5 119 59.7
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 1.2e-21 107.1 119 60.5
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.1e-21 106.3 111 59.5
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 2.1e-21 106.3 111 59.5
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 2.7e-21 105.9 117 62.4
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 4.6e-21 105.1 114 57.9
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 7.9e-21 104.4 114 61.4
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 1.0e-20 104.0 121 55.4
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 1.3e-20 103.6 112 58.9
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.3e-20 102.8 111 57.7
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 3.9e-20 102.1 119 57.1
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 3.9e-20 102.1 122 56.6
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 1.1e-19 100.5 118 56.8
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 1.5e-19 100.1 116 50.0
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 1.5e-19 100.1 122 55.7
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 1.9e-19 99.8 122 57.4
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.5e-19 99.4 123 55.3
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 3.3e-19 99.0 113 56.6
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 9.7e-19 97.4 116 56.9
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 9.7e-19 97.4 111 55.9
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 2.8e-18 95.9 125 55.2
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.8e-18 95.9 121 53.7
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 4.8e-18 95.1 117 53.8
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 8.2e-18 94.4 122 50.8
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.1e-17 94.0 122 53.3
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 1.1e-17 94.0 111 54.1
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 3.1e-17 92.4 117 50.4
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 4.1e-17 92.0 125 52.0
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 6.9e-17 91.3 99 55.6
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 1.2e-16 90.5 111 58.6
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 1.5e-16 90.1 103 59.2
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 1.5e-16 90.1 117 54.7
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 1.5e-16 90.1 113 50.4
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 2.0e-16 89.7 127 52.0
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 2.0e-16 89.7 127 52.0
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 2.6e-16 89.4 118 52.5
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 2.6e-16 89.4 124 52.4
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 3.4e-16 89.0 125 50.4
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 5.9e-16 88.2 119 50.4
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 7.6e-16 87.8 121 52.9
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.3e-15 87.0 81 61.7
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 2.2e-15 86.3 124 48.4
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 2.9e-15 85.9 110 52.7
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 3.8e-15 85.5 109 50.5
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 6.5e-15 84.7 110 53.6
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 8.5e-15 84.3 116 50.9
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 1.9e-14 83.2 129 48.1
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 1.9e-14 83.2 129 48.1
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 2.5e-14 82.8 103 50.5
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 3.2e-14 82.4 120 47.5
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 7.2e-14 81.3 108 53.7
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 1.2e-13 80.5 109 50.5
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 3.6e-13 79.0 111 54.1
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 4.6e-13 78.6 73 63.0
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 4.6e-13 78.6 116 51.7
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 6.1e-13 78.2 69 60.9
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 7.9e-13 77.8 116 50.0
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 7.9e-13 77.8 67 64.2
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 7.9e-13 77.8 99 51.5
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 7.9e-13 77.8 114 50.9
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 1.0e-12 77.4 110 51.8
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 1.0e-12 77.4 110 51.8
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.4e-12 77.0 111 50.5
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.3e-12 76.3 113 52.2
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.3e-12 76.3 113 52.2
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 2.3e-12 76.3 111 49.5
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.9e-12 75.5 71 59.2
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.9e-12 75.5 113 46.0
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 3.9e-12 75.5 106 51.9
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 5.1e-12 75.1 109 50.5
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 5.1e-12 75.1 113 51.3
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 6.7e-12 74.7 114 50.9
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 6.7e-12 74.7 113 46.0
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 6.7e-12 74.7 110 51.8
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 8.8e-12 74.3 111 48.6
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 8.8e-12 74.3 106 53.8
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 1.1e-11 73.9 110 51.8
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 1.5e-11 73.6 111 49.5
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 1.9e-11 73.2 112 45.5
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 2.5e-11 72.8 110 49.1
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 2.5e-11 72.8 115 47.8
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 2.5e-11 72.8 114 50.0
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 3.3e-11 72.4 111 50.5
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 3.3e-11 72.4 111 50.5
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 4.3e-11 72.0 109 48.6
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 4.3e-11 72.0 111 50.5
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 5.7e-11 71.6 129 43.4
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 5.7e-11 71.6 113 49.6
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 5.7e-11 71.6 105 50.5
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 7.4e-11 71.2 110 50.9
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 9.7e-11 70.9 67 61.2
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 1.7e-10 70.1 109 48.6
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 1.7e-10 70.1 109 48.6
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 1.7e-10 70.1 109 48.6
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 2.2e-10 69.7 112 46.4
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 2.2e-10 69.7 149 38.3
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 8.2e-10 67.8 113 48.7
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 1.1e-09 67.4 160 38.1
Lsat_1_v5_gn_1_28901 Lactuca sativa HOM05D005335 ORTHO05D006472 1.1e-09 67.4 107 43.0
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 1.1e-09 67.4 64 65.6
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 1.4e-09 67.0 110 46.4
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 2.4e-09 66.2 148 37.8
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 6.9e-09 64.7 37 86.5
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 9.1e-09 64.3 69 56.5
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 2.0e-08 63.2 114 44.7
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 5.9e-08 61.6 124 41.9
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 1.3e-07 60.5 59 64.4
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 5.5e-06 55.1 109 39.4
ECA246G0037 Erigeron canadensis HOM05D005335 ORTHO05D006472 7.2e-06 54.7 113 41.6


User provided reference genes

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