Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 3.6e-126 454.9 225 100.0
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 3.8e-112 408.3 225 88.4
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 3.2e-111 405.2 230 87.0
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 1.4e-109 399.8 224 87.1
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 2.3e-109 399.1 224 85.7
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 3.0e-109 398.7 222 89.2
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 6.8e-109 397.5 224 86.6
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 6.8e-109 397.5 224 86.6
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 3.4e-108 395.2 224 86.2
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.7e-107 392.9 224 85.7
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.7e-107 392.9 224 85.7
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 2.2e-107 392.5 228 86.8
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 2.8e-107 392.1 224 85.3
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 1.4e-106 389.8 226 83.2
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 1.4e-106 389.8 224 84.8
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 5.4e-106 387.9 225 84.9
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 1.2e-105 386.7 223 82.5
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 4.5e-105 384.8 223 82.1
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.7e-104 382.9 228 81.1
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 2.3e-104 382.5 224 83.0
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 2.9e-104 382.1 227 82.4
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 3.8e-104 381.7 225 83.6
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 5.0e-104 381.3 226 83.2
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 1.1e-103 380.2 226 82.7
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 1.1e-103 380.2 227 81.9
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.5e-103 379.8 228 82.0
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 2.5e-103 379.0 223 82.1
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 3.3e-103 378.6 223 81.2
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 3.3e-103 378.6 226 82.3
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 3.3e-103 378.6 227 81.5
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 5.6e-103 377.9 226 81.9
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 5.6e-103 377.9 225 82.2
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 7.2e-103 377.5 228 81.6
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 7.2e-103 377.5 227 81.1
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 1.6e-102 376.3 224 83.0
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 2.1e-102 375.9 223 80.7
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 2.8e-102 375.6 224 83.5
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 1.0e-101 373.6 224 79.9
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.0e-101 373.6 225 80.9
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.0e-101 373.6 225 80.9
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 2.3e-101 372.5 250 76.4
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 1.5e-100 369.8 228 79.8
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 2.6e-100 369.0 225 80.0
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 2.6e-100 369.0 209 84.7
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 7.5e-100 367.5 227 81.1
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 1.7e-99 366.3 226 81.9
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 3.7e-99 365.2 224 79.9
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 4.9e-99 364.8 231 76.2
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 6.4e-99 364.4 224 79.9
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 8.3e-99 364.0 228 78.5
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 1.8e-98 362.8 223 80.7
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 1.6e-97 359.8 225 78.2
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 2.7e-97 359.0 225 76.9
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.7e-97 359.0 245 74.3
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 2.7e-97 359.0 224 78.1
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 5.9e-97 357.8 225 77.3
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 5.9e-97 357.8 223 76.7
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 1.0e-96 357.1 228 75.4
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 1.0e-96 357.1 226 78.8
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 1.3e-96 356.7 222 76.1
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 1.3e-96 356.7 237 77.2
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 1.7e-96 356.3 233 76.8
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 3.9e-96 355.1 223 78.9
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 5.0e-96 354.8 222 75.2
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 5.0e-96 354.8 222 75.2
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 5.0e-96 354.8 261 70.1
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 6.6e-96 354.4 222 75.2
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 6.6e-96 354.4 222 75.2
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 6.6e-96 354.4 225 76.9
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 8.6e-96 354.0 228 76.3
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 3.3e-95 352.1 223 77.6
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 4.3e-95 351.7 222 74.8
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 5.6e-95 351.3 236 74.2
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 1.2e-94 350.1 224 75.0
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 1.6e-94 349.7 223 74.4
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 2.8e-94 349.0 210 81.4
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 1.0e-93 347.1 250 72.4
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 1.4e-93 346.7 207 82.6
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 2.3e-93 345.9 206 81.1
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 5.8e-92 341.3 228 74.6
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 1.7e-91 339.7 224 74.1
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 8.3e-91 337.4 210 79.0
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 3.2e-90 335.5 231 71.4
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 2.7e-89 332.4 206 78.2
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 3.5e-89 332.0 208 76.9
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 6.0e-89 331.3 207 77.3
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 3.9e-88 328.6 224 73.7
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 8.6e-88 327.4 230 73.9
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 3.3e-87 325.5 226 74.3
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 2.6e-84 315.8 212 75.0
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 4.4e-84 315.1 221 70.6
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 2.2e-83 312.8 234 69.2
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 2.9e-83 312.4 207 74.9
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 9.2e-82 307.4 242 64.0
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 2.8e-78 295.8 236 64.0
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 6.4e-75 284.6 152 88.2
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 1.9e-74 283.1 174 79.3
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 3.2e-74 282.3 225 64.0
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 7.8e-73 277.7 209 68.4
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 1.2e-70 270.4 179 67.0
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 4.7e-70 268.5 175 70.3
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 6.2e-70 268.1 336 49.4
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 2.0e-68 263.1 225 60.4
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 5.8e-68 261.5 226 60.2
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 1.9e-63 246.5 223 58.3
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 3.3e-63 245.7 154 76.6
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 4.3e-63 245.4 147 76.9
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 2.4e-61 239.6 125 89.6
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 4.4e-60 235.3 145 82.8
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 2.4e-58 229.6 166 61.4
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 4.2e-50 202.2 146 61.0
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 2.6e-44 183.0 175 52.6
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 7.1e-42 174.9 134 61.9
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 7.4e-39 164.9 159 49.1
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.6e-33 147.1 89 83.1
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 6.9e-29 131.7 63 92.1
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.4e-26 124.0 68 91.2
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 9.4e-26 121.3 86 64.0
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.7e-25 119.8 63 81.0
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 1.5e-23 114.0 144 46.5
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 2.2e-22 110.2 121 49.6
Lalb_Chr14g0365481 Lupinus albus HOM05D006563 ORTHO05D239264 8.2e-06 55.1 39 66.7


User provided reference genes

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