Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv23145 Davidia involucrata HOM05D003858 ORTHO05D005878 1.3e-289 999.2 567 100.0
CSS0032323 Camellia sinensis var. sinensis HOM05D003858 ORTHO05D005878 1.9e-245 852.4 575 84.7
Actinidia08869 Actinidia chinensis HOM05D003858 ORTHO05D005878 1.3e-238 829.7 474 89.2
Rhsim10G0051500 Rhododendron simsii HOM05D003858 ORTHO05D005878 7.4e-237 823.9 564 81.2
Rhsim12G0174400 Rhododendron simsii HOM05D003858 ORTHO05D005878 1.2e-234 816.6 484 87.4
vmacro16677 Vaccinium macrocarpon HOM05D003858 ORTHO05D005878 8.4e-233 810.4 488 84.8
Hma1.2p1_0014F.1_g009460 Hydrangea macrophylla HOM05D003858 ORTHO05D005878 3.7e-228 795.0 571 82.1
Thecc.03G129000 Theobroma cacao HOM05D003858 ORTHO05D005878 4.8e-228 794.7 537 77.8
TAR371G0204 Trochodendron aralioides HOM05D003858 ORTHO05D005878 1.8e-227 792.7 532 78.4
Duzib205G0757 Durio zibethinus HOM05D003858 ORTHO05D005878 2.6e-226 788.9 539 77.6
COL.COLO4_28121 Corchorus olitorius HOM05D003858 ORTHO05D005878 4.5e-226 788.1 536 79.5
Manes.06G119400 Manihot esculenta HOM05D003858 ORTHO05D005878 3.8e-225 785.0 565 79.5
TWI23G0194 Tripterygium wilfordii HOM05D003858 ORTHO05D005878 3.2e-224 781.9 521 77.9
Gohir.D03G114300 Gossypium hirsutum HOM05D003858 ORTHO05D005878 4.6e-223 778.1 574 76.7
Gorai.003G120600 Gossypium raimondii HOM05D003858 ORTHO05D005878 1.0e-222 776.9 566 77.9
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 1.4e-222 776.5 539 80.3
Cpa.g.sc250.13 Carica papaya HOM05D003858 ORTHO05D005878 3.0e-222 775.4 547 82.4
HanXRQChr02g0034711 Helianthus annuus HOM05D003858 ORTHO05D005878 5.1e-222 774.6 568 79.9
CiPaw.12G042900 Carya illinoinensis HOM05D003858 ORTHO05D005878 1.5e-221 773.1 556 77.5
Cc10_g13400 Coffea canephora HOM05D003858 ORTHO05D005878 2.0e-221 772.7 565 78.2
Gohir.A03G052800 Gossypium hirsutum HOM05D003858 ORTHO05D005878 1.3e-220 770.0 581 74.9
CANSAT80G0729 Cannabis sativa HOM05D003858 ORTHO05D005878 2.8e-220 768.8 473 81.8
Atru.chr9.1128 Acer truncatum HOM05D003858 ORTHO05D005878 8.2e-220 767.3 475 81.5
Oeu001550.1 Olea europaea HOM05D003858 ORTHO05D005878 1.8e-219 766.1 558 78.5
ECA247G4076 Erigeron canadensis HOM05D003858 ORTHO05D005878 1.2e-218 763.5 560 78.8
Nn4g22329 Nelumbo nucifera HOM05D003858 ORTHO05D005878 1.2e-218 763.5 563 78.2
DCAR_001872 Daucus carota HOM05D003858 ORTHO05D005878 1.5e-218 763.1 535 78.1
Nitab4.5_0005642g0040 Nicotiana tabacum HOM05D003858 ORTHO05D005878 1.7e-217 759.6 450 84.2
Nitab4.5_0006042g0010 Nicotiana tabacum HOM05D003858 ORTHO05D005878 1.1e-216 756.9 461 82.6
SGA_v2.0_scaffold2G01192 Striga asiatica HOM05D003858 ORTHO05D005878 7.2e-216 754.2 562 77.0
CiPaw.15G056500 Carya illinoinensis HOM05D003858 ORTHO05D005878 1.6e-215 753.1 535 77.9
SGA_v2.0_scaffold28G11963 Striga asiatica HOM05D003858 ORTHO05D005878 6.1e-215 751.1 484 80.2
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 6.1e-215 751.1 528 78.2
Potri.015G096100 Populus trichocarpa HOM05D003858 ORTHO05D005878 1.4e-214 750.0 529 78.3
Haze_09759 Corylus avellana HOM05D003858 ORTHO05D005878 3.9e-214 748.4 573 71.9
Cfa015653 Carpinus fangiana HOM05D003858 ORTHO05D005878 6.7e-214 747.7 543 72.9
arahy.Tifrunner.gnm1.ann1.L81EPG Arachis hypogaea HOM05D003858 ORTHO05D005878 7.4e-213 744.2 536 78.0
Peaxi162Scf00119g00520 Petunia axillaris HOM05D003858 ORTHO05D005878 1.7e-212 743.0 483 79.7
Lj5C96T4 Lonicera japonica HOM05D003858 ORTHO05D005878 4.8e-212 741.5 534 77.3
arahy.Tifrunner.gnm1.ann1.LEEI49 Arachis hypogaea HOM05D003858 ORTHO05D005878 6.3e-212 741.1 536 78.7
MELO3C002182.2 Cucumis melo HOM05D003858 ORTHO05D005878 6.3e-212 741.1 532 74.4
Sabra15G0116900 Salix brachista HOM05D003858 ORTHO05D005878 2.4e-211 739.2 573 76.4
Solyc08g080850.4 Solanum lycopersicum HOM05D003858 ORTHO05D005878 2.4e-211 739.2 530 80.0
CsaV3_1G007630 Cucumis sativus L. HOM05D003858 ORTHO05D005878 3.1e-211 738.8 470 78.7
CAN.G774.2 Capsicum annuum HOM05D003858 ORTHO05D005878 4.1e-211 738.4 472 79.2
SalBow6G4120 Salvia bowleyana HOM05D003858 ORTHO05D005878 4.1e-211 738.4 549 77.4
RcHm_v2.0_Chr7g0190211 Rosa chinensis HOM05D003858 ORTHO05D005878 2.0e-210 736.1 463 80.1
PGSC0003DMG400012349 Solanum tuberosum HOM05D003858 ORTHO05D005878 3.5e-210 735.3 528 79.4
Haze_07135 Corylus avellana HOM05D003858 ORTHO05D005878 4.5e-210 734.9 543 75.0
Sopen08g029150 Solanum pennellii HOM05D003858 ORTHO05D005878 1.7e-209 733.0 457 81.4
Lsat_1_v5_gn_1_28960 Lactuca sativa HOM05D003858 ORTHO05D005878 2.9e-209 732.3 465 81.1
Prupe.5G151200 Prunus persica HOM05D003858 ORTHO05D005878 8.5e-209 730.7 505 77.2
Sed0027713 Sechium edule HOM05D003858 ORTHO05D005878 1.4e-208 729.9 516 75.8
FAN08G1590 Fragaria x ananassa HOM05D003858 ORTHO05D005878 2.5e-208 729.2 501 77.2
FvH4_5g08310 Fragaria vesca HOM05D003858 ORTHO05D005878 5.5e-208 728.0 504 76.2
MD14G1157300 Malus domestica HOM05D003858 ORTHO05D005878 5.5e-208 728.0 536 78.0
DCAR_021618 Daucus carota HOM05D003858 ORTHO05D005878 1.6e-207 726.5 569 68.0
Glyma.18G230300 Glycine max HOM05D003858 ORTHO05D005878 1.3e-204 716.8 450 81.3
PGR004G1062 Punica granatum HOM05D003858 ORTHO05D005878 2.2e-204 716.1 536 73.7
Migut.N03254 Erythranthe guttata HOM05D003858 ORTHO05D005878 2.8e-204 715.7 449 80.8
Eucgr.E01497 Eucalyptus grandis HOM05D003858 ORTHO05D005878 4.8e-204 714.9 561 72.2
Lalb_Chr01g0021111 Lupinus albus HOM05D003858 ORTHO05D005878 1.8e-203 713.0 509 74.3
Glyma.09G261800 Glycine max HOM05D003858 ORTHO05D005878 3.1e-203 712.2 424 85.4
Hund02439 Selenicereus undatus HOM05D003858 ORTHO05D005878 7.0e-203 711.1 537 76.2
Sc10g0010460 Simmondsia chinensis HOM05D003858 ORTHO05D005878 1.6e-202 709.9 552 77.2
Lj1g0027711 Lotus japonicus HOM05D003858 ORTHO05D005878 2.6e-202 709.1 470 78.3
Phvul.008G067600 Phaseolus vulgaris HOM05D003858 ORTHO05D005878 2.9e-201 705.7 429 83.2
QL10p002959 Quercus lobata HOM05D003858 ORTHO05D005878 2.9e-201 705.7 538 74.2
PSO478G4955 Papaver somniferum HOM05D003858 ORTHO05D005878 4.2e-200 701.8 461 77.9
AUR62028258 Chenopodium quinoa HOM05D003858 ORTHO05D005878 2.1e-199 699.5 445 80.4
PSO017G3328 Papaver somniferum HOM05D003858 ORTHO05D005878 2.1e-199 699.5 461 77.7
Ah.01g020640 Amaranthus hybridus HOM05D003858 ORTHO05D005878 8.8e-198 694.1 541 71.5
A04p19370 Brassica napus HOM05D003858 ORTHO05D005878 1.5e-197 693.3 433 80.1
BcaC02g08384 Brassica carinata HOM05D003858 ORTHO05D005878 3.4e-197 692.2 434 79.7
C04p54940 Brassica napus HOM05D003858 ORTHO05D005878 3.4e-197 692.2 434 79.7
BraA04t17533Z Brassica rapa HOM05D003858 ORTHO05D005878 5.7e-197 691.4 445 78.0
Sp4g03970 Schrenkiella parvula HOM05D003858 ORTHO05D005878 1.7e-196 689.9 418 80.9
THA.LOC104800505 Tarenaya hassleriana HOM05D003858 ORTHO05D005878 1.1e-195 687.2 441 78.2
TPR.G2433 Trifolium pratense HOM05D003858 ORTHO05D005878 1.4e-195 686.8 427 80.8
Aqoxy3G00800 Aquilegia oxysepala HOM05D003858 ORTHO05D005878 3.1e-195 685.6 549 68.7
BcaB06g28028 Brassica carinata HOM05D003858 ORTHO05D005878 5.3e-195 684.9 431 78.2
Thhalv10000120m.g Eutrema salsugineum HOM05D003858 ORTHO05D005878 1.6e-194 683.3 434 77.4
AL4G16080 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 4.5e-194 681.8 421 80.0
BolC4t27030H Brassica oleracea HOM05D003858 ORTHO05D005878 1.0e-193 680.6 434 79.3
Carub.0004s0455 Capsella rubella HOM05D003858 ORTHO05D005878 1.3e-193 680.2 429 78.6
AT5G37350 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 3.8e-193 678.7 434 79.0
AT2G24990 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 5.0e-193 678.3 434 77.6
Medtr7g090710 Medicago truncatula HOM05D003858 ORTHO05D005878 5.0e-193 678.3 492 73.0
EL10Ac9g21903 Beta vulgaris HOM05D003858 ORTHO05D005878 1.5e-192 676.8 455 77.4
Aa31sc86G50 Aethionema arabicum HOM05D003858 ORTHO05D005878 2.5e-192 676.0 438 76.9
VMungo1383G3568 Vigna mungo HOM05D003858 ORTHO05D005878 2.5e-192 676.0 417 82.0
CARHR116740 Cardamine hirsuta HOM05D003858 ORTHO05D005878 1.8e-190 669.8 421 78.9
CDE05G2345 Ceratophyllum demersum HOM05D003858 ORTHO05D005878 4.0e-190 668.7 513 69.2
SalBow7G4372 Salvia bowleyana HOM05D003858 ORTHO05D005878 4.4e-189 665.2 558 71.9
FAN18G4532 Fragaria x ananassa HOM05D003858 ORTHO05D005878 4.5e-186 655.2 507 71.2
FAN04G1110 Fragaria x ananassa HOM05D003858 ORTHO05D005878 2.9e-185 652.5 507 70.8
VMungo1383G2243 Vigna mungo HOM05D003858 ORTHO05D005878 2.4e-179 632.9 424 76.7
Aa31LG8G17300 Aethionema arabicum HOM05D003858 ORTHO05D005878 7.8e-178 627.9 429 74.6
AL7G45930 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 1.0e-177 627.5 425 75.3
ClCG01G014690 Citrullus lanatus HOM05D003858 ORTHO05D005878 2.3e-174 616.3 534 66.1
RcHm_v2.0_Chr5g0020401 Rosa chinensis HOM05D003858 ORTHO05D005878 3.1e-174 615.9 498 65.5
SEGI_19941 Sequoiadendron giganteum HOM05D003858 ORTHO05D005878 6.8e-174 614.8 505 63.4
unitig_21.g20184 Utricularia gibba HOM05D003858 ORTHO05D005878 1.2e-173 614.0 552 66.5
AUR62003032 Chenopodium quinoa HOM05D003858 ORTHO05D005878 9.8e-173 610.9 370 82.7
ATR0559G302 Amborella trichopoda HOM05D003858 ORTHO05D005878 1.1e-171 607.4 511 65.6
TAR629G0830 Trochodendron aralioides HOM05D003858 ORTHO05D005878 1.6e-170 603.6 395 79.7
Psat3g110800 Pisum sativum HOM05D003858 ORTHO05D005878 5.0e-169 598.6 488 67.2
MBI07_g31017_MAGBIO Magnolia biondii HOM05D003858 ORTHO05D005878 1.1e-168 597.4 421 77.9
AUR62007839 Chenopodium quinoa HOM05D003858 ORTHO05D005878 1.9e-168 596.7 396 77.5
HPP92_020969 Vanilla planifolia HOM05D003858 ORTHO05D005878 1.8e-166 590.1 506 64.0
PSO170G6136 Papaver somniferum HOM05D003858 ORTHO05D005878 4.0e-166 589.0 500 63.6
Os07g0162300 Oryza sativa ssp. japonica HOM05D003858 ORTHO05D005878 4.4e-165 585.5 365 79.5
Zm00001eb103140 Zea mays HOM05D003858 ORTHO05D005878 7.5e-165 584.7 566 62.2
Zm00001eb256840 Zea mays HOM05D003858 ORTHO05D005878 9.8e-165 584.3 566 62.7
TPR.G23280 Trifolium pratense HOM05D003858 ORTHO05D005878 2.4e-163 579.7 356 81.2
Ca_07893_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 5.2e-158 562.0 404 72.0
FvH4_5g16770 Fragaria vesca HOM05D003858 ORTHO05D005878 1.5e-157 560.5 490 61.4
FAN16G2509 Fragaria x ananassa HOM05D003858 ORTHO05D005878 2.2e-156 556.6 491 60.9
Mapoly0084s0039 Marchantia polymorpha HOM05D003858 ORTHO05D005878 2.4e-155 553.1 459 62.5
SMO117G0291 Selaginella moellendorffii HOM05D003858 ORTHO05D005878 4.4e-149 532.3 419 64.7
MD06G1142000 Malus domestica HOM05D003858 ORTHO05D005878 3.0e-145 519.6 414 66.4
FAN20G1682 Fragaria x ananassa HOM05D003858 ORTHO05D005878 2.5e-144 516.5 434 63.8
Lj7A11G39 Lonicera japonica HOM05D003858 ORTHO05D005878 1.6e-138 497.3 511 55.0
Medtr7g076710 Medicago truncatula HOM05D003858 ORTHO05D005878 5.1e-137 492.3 398 67.1
PSO724G1315 Papaver somniferum HOM05D003858 ORTHO05D005878 2.0e-133 480.3 500 56.2
Pp3c21_1450 Physcomitrium patens HOM05D003858 ORTHO05D005878 1.9e-131 473.8 379 63.3
Medtr7g012400 Medicago truncatula HOM05D003858 ORTHO05D005878 4.2e-131 472.6 392 63.5
PSO423G0213 Papaver somniferum HOM05D003858 ORTHO05D005878 7.1e-131 471.9 498 57.0
Lj7A12G16 Lonicera japonica HOM05D003858 ORTHO05D005878 1.2e-130 471.1 437 57.7
AagrBONN_evm.TU.Sc2ySwM_228.678 Anthoceros agrestis HOM05D003858 ORTHO05D005878 2.1e-130 470.3 396 59.8
SHI21468 Sapria himalayana HOM05D003858 ORTHO05D005878 1.6e-127 460.7 674 42.7
TPR.G21069 Trifolium pratense HOM05D003858 ORTHO05D005878 6.9e-126 455.3 414 61.4
PSO170G3101 Papaver somniferum HOM05D003858 ORTHO05D005878 1.3e-124 451.1 500 53.6
Cre13.g580900 Chlamydomonas reinhardtii HOM05D003858 ORTHO05D005878 1.9e-123 447.2 444 53.4
PSO724G0964 Papaver somniferum HOM05D003858 ORTHO05D005878 3.0e-121 439.9 413 60.0
PSO724G1140 Papaver somniferum HOM05D003858 ORTHO05D005878 2.9e-116 423.3 413 58.8
PRCOL_00003781 Prasinoderma coloniale HOM05D003858 ORTHO05D005878 8.7e-113 411.8 406 53.2
RcHm_v2.0_Chr5g0063241 Rosa chinensis HOM05D003858 ORTHO05D005878 1.3e-108 397.9 461 51.4
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 9.4e-107 391.7 352 57.4
RcHm_v2.0_Chr5g0063291 Rosa chinensis HOM05D003858 ORTHO05D005878 7.4e-104 382.1 455 49.9
Ca_28300_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 3.7e-103 379.8 304 64.1
SHI21367 Sapria himalayana HOM05D003858 ORTHO05D005878 1.0e-100 371.7 506 45.3
PSO063G1302 Papaver somniferum HOM05D003858 ORTHO05D005878 8.5e-100 368.6 281 69.0
CBR_g61467 Chara braunii HOM05D003858 ORTHO05D005878 2.0e-96 357.5 324 58.3
Zm00001eb256780 Zea mays HOM05D003858 ORTHO05D005878 3.1e-94 350.1 260 70.8
DCAR_029022 Daucus carota HOM05D003858 ORTHO05D005878 1.0e-89 335.1 437 46.5
Haze_27048 Corylus avellana HOM05D003858 ORTHO05D005878 6.5e-84 315.8 382 43.2
Actinidia36803 Actinidia chinensis HOM05D003858 ORTHO05D015239 2.7e-82 310.5 175 87.4
CDE05G1919 Ceratophyllum demersum HOM05D003858 ORTHO05D015239 2.6e-80 303.9 225 69.8
Cfa023770 Carpinus fangiana HOM05D003858 ORTHO05D005878 2.0e-77 294.3 339 47.5
arahy.Tifrunner.gnm1.ann1.RIH0QL Arachis hypogaea HOM05D003858 ORTHO05D015239 9.4e-75 285.4 273 68.5
PSO421G0376 Papaver somniferum HOM05D003858 ORTHO05D015239 1.8e-70 271.2 351 48.7
Actinidia36804 Actinidia chinensis HOM05D003858 ORTHO05D005878 5.6e-59 233.0 314 50.3
Cc10_g13370 Coffea canephora HOM05D003858 ORTHO05D015239 2.0e-40 171.4 98 81.6
FAN13G2455 Fragaria x ananassa HOM05D003858 ORTHO05D015239 2.0e-32 144.8 100 71.0
FAN08G1067 Fragaria x ananassa HOM05D003858 ORTHO05D015239 1.0e-28 132.5 193 44.6
Medtr6g024025 Medicago truncatula HOM05D003858 ORTHO05D267118 8.7e-28 129.4 106 64.2
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 8.1e-26 122.9 93 74.2
Zm00001eb256800 Zea mays HOM05D003858 ORTHO05D033539 2.4e-25 121.3 132 55.3
FvH4_3g12461 Fragaria vesca HOM05D000004 ORTHO05D000002 2.0e-24 118.2 148 46.6
PSO675G5360 Papaver somniferum HOM05D003858 ORTHO05D015239 4.9e-23 113.6 219 41.6
BolC8t51470H Brassica oleracea HOM05D003858 ORTHO05D015239 4.2e-22 110.5 123 50.4
C08p38970 Brassica napus HOM05D003858 ORTHO05D033539 9.3e-22 109.4 131 51.9
FAN08G1033 Fragaria x ananassa HOM05D003858 ORTHO05D005878 2.1e-21 108.2 71 74.6
CBR_g61468 Chara braunii HOM05D003858 ORTHO05D131775 2.3e-20 104.8 156 44.9
BolC8t51471H Brassica oleracea HOM05D003858 ORTHO05D033539 1.6e-18 98.6 131 48.9
FvH4_5g25261 Fragaria vesca HOM05D003858 ORTHO05D015239 3.6e-18 97.4 83 60.2
TAR625G0709 Trochodendron aralioides HOM05D003858 ORTHO05D015239 1.4e-17 95.5 45 95.6
FAN21G1362 Fragaria x ananassa HOM05D003858 ORTHO05D207154 1.2e-16 92.4 172 34.9
Zm00001eb256810 Zea mays HOM05D003858 ORTHO05D005878 1.3e-15 89.0 151 41.1
COL.COLO4_09285 Corchorus olitorius HOM05D003858 ORTHO05D155188 2.2e-15 88.2 46 91.3
HanXRQChr13g0426321 Helianthus annuus HOM05D003858 ORTHO05D000008 2.2e-15 88.2 75 53.3
ECA247G3860 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.0e-12 79.3 108 44.4
ECA247G3834 Erigeron canadensis HOM05D000031 ORTHO05D000030 3.9e-12 77.4 86 53.5
BcaC07g40899 Brassica carinata HOM05D003858 ORTHO05D015239 1.9e-11 75.1 120 40.8
DCAR_007996 Daucus carota HOM05D003858 ORTHO05D176634 1.8e-09 68.6 51 62.7
Peaxi162Scf00586g00512 Petunia axillaris HOM05D004480 ORTHO05D005546 2.0e-08 65.1 203 25.1
CiPaw.05G188800 Carya illinoinensis HOM05D003858 ORTHO05D127864 7.6e-08 63.2 39 82.1
Nitab4.5_0002844g0040 Nicotiana tabacum HOM05D004480 ORTHO05D005546 7.6e-08 63.2 213 24.9
Potri.017G001100 Populus trichocarpa HOM05D004480 ORTHO05D005546 6.5e-07 60.1 203 23.2
Sabra17G0005500 Salix brachista HOM05D000001 ORTHO05D005546 7.1e-06 56.6 203 22.7


User provided reference genes

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