Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 1.2e-300 1035.8 567 100.0
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 2.8e-244 848.6 558 86.2
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 1.0e-214 750.4 524 80.0
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 7.4e-213 744.2 527 80.6
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 2.6e-210 735.7 542 75.1
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 1.0e-206 723.8 538 73.0
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 6.5e-201 704.5 539 72.2
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 1.2e-197 693.7 571 72.0
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 1.3e-196 690.3 595 70.4
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 7.0e-195 684.5 540 70.0
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 1.3e-193 680.2 497 74.0
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 8.5e-193 677.6 538 68.8
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 1.5e-189 666.8 540 68.3
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 5.7e-189 664.8 568 68.7
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 6.3e-188 661.4 528 73.9
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 8.3e-188 661.0 540 68.0
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 4.2e-184 648.7 492 71.5
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 3.6e-183 645.6 530 74.0
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 3.4e-181 639.0 498 70.5
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 8.3e-180 634.4 499 71.5
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 2.7e-178 629.4 495 70.9
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 2.7e-178 629.4 566 63.6
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 1.4e-174 617.1 495 69.5
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.4e-174 617.1 495 69.9
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 8.9e-174 614.4 495 67.7
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 1.5e-173 613.6 555 64.1
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 4.4e-173 612.1 558 65.4
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 6.0e-170 601.7 502 67.5
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 1.3e-169 600.5 496 66.7
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 2.3e-169 599.7 495 66.9
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 1.8e-166 590.1 622 57.1
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 4.0e-166 589.0 555 62.0
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.2e-165 587.4 556 62.1
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.5e-165 587.0 555 62.0
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 1.1e-163 580.9 507 64.9
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 7.1e-163 578.2 498 67.1
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 9.2e-163 577.8 502 64.5
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 1.0e-161 574.3 502 63.9
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 5.1e-161 572.0 558 60.9
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 6.2e-159 565.1 510 64.1
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 1.8e-158 563.5 511 62.8
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 2.6e-157 559.7 500 65.4
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 4.4e-157 558.9 433 71.4
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 5.8e-157 558.5 504 62.7
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 1.9e-155 553.5 496 63.5
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 2.3e-153 546.6 470 65.7
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 5.1e-153 545.4 548 60.9
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 1.1e-152 544.3 539 58.6
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 1.9e-152 543.5 531 58.6
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 2.8e-151 539.7 457 68.3
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 8.4e-148 528.1 487 62.2
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 4.3e-144 515.8 499 59.5
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 1.3e-143 514.2 497 61.0
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 4.4e-141 505.8 434 66.1
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 2.4e-139 500.0 532 61.7
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 9.3e-139 498.0 532 62.0
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 1.2e-138 497.7 501 58.7
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 2.1e-138 496.9 496 59.1
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 1.3e-137 494.2 502 60.0
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 1.7e-137 493.8 499 60.1
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 5.6e-136 488.8 499 59.5
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 1.3e-135 487.6 498 58.6
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 1.5e-133 480.7 488 57.8
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 3.4e-133 479.6 503 57.9
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 3.4e-133 479.6 503 57.9
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 7.9e-130 468.4 497 57.7
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 5.6e-128 462.2 510 62.7
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 3.7e-127 459.5 577 50.8
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 9.0e-126 454.9 499 55.7
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 2.5e-123 446.8 355 68.7
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 2.5e-120 436.8 372 68.0
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.9e-115 420.6 424 59.7
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 6.3e-111 405.6 501 50.1
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 1.1e-107 394.8 414 60.1
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 3.2e-107 393.3 421 57.7
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 2.0e-104 384.0 505 48.7
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 2.6e-101 373.6 509 47.9
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 8.5e-100 368.6 254 76.4
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 5.1e-97 359.4 395 54.7
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 4.5e-93 346.3 322 60.6
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 2.7e-69 267.3 324 52.5
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 3.6e-58 230.3 318 50.0
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 3.5e-45 187.2 226 47.3
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 6.2e-42 176.4 320 40.6
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.2e-40 172.2 173 55.5
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 2.1e-37 161.4 106 77.4
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 2.1e-29 134.8 165 52.7
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 7.8e-29 132.9 544 30.0
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 6.2e-26 123.2 79 82.3
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 1.8e-25 121.7 236 40.3
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 3.8e-23 114.0 76 80.3
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 6.4e-23 113.2 71 84.5
Cpa.g.sc90.43 Carica papaya HOM05D007238 ORTHO05D009206 2.5e-19 101.3 72 69.4
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 2.1e-18 98.2 53 96.2
HanXRQChr03g0081141 Helianthus annuus HOM05D007238 ORTHO05D009206 4.8e-18 97.1 64 70.3
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 1.4e-17 95.5 722 26.0
CSS0039429 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 5.3e-17 93.6 75 70.7
CSS0030533 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 7.6e-16 89.7 75 69.3
CSS0027374 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 6.4e-15 86.7 75 68.0
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 2.1e-13 81.6 44 93.2
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 8.7e-12 76.3 291 30.9
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 3.3e-11 74.3 41 90.2
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 1.4e-09 68.9 54 64.8
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 6.9e-09 66.6 62 58.1
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 6.9e-09 66.6 62 58.1
FvH4_5g29470 Fragaria vesca HOM05D007238 ORTHO05D009206 1.7e-07 62.0 60 60.0
FvH4_5g27460 Fragaria vesca HOM05D007238 ORTHO05D009206 2.2e-07 61.6 46 69.6
HPP92_022727 Vanilla planifolia HOM05D007238 ORTHO05D009206 1.1e-06 59.3 120 33.3
FvH4_5g27461 Fragaria vesca HOM05D007238 ORTHO05D009206 5.5e-06 57.0 102 40.2


User provided reference genes

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