Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 5.3e-74 280.8 130 100.0
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 1.7e-59 232.6 120 85.0
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 1.2e-57 226.5 115 87.0
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 1.0e-56 223.4 119 83.2
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 1.0e-56 223.4 119 83.2
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 1.7e-56 222.6 120 81.7
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 5.0e-56 221.1 115 84.3
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 8.6e-56 220.3 115 84.3
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 1.5e-55 219.5 119 80.7
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.9e-55 219.2 120 81.7
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 1.9e-55 219.2 115 85.2
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 1.9e-55 219.2 116 82.8
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 3.3e-55 218.4 119 82.4
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 3.3e-55 218.4 120 82.5
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 5.5e-55 217.6 120 80.0
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 7.2e-55 217.2 114 83.3
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 9.5e-55 216.9 116 80.2
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 1.2e-54 216.5 120 80.8
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 1.2e-54 216.5 115 83.5
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 1.6e-54 216.1 116 82.8
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 2.8e-54 215.3 120 79.2
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 3.6e-54 214.9 116 82.8
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 6.1e-54 214.2 115 80.9
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 6.1e-54 214.2 117 81.2
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 6.1e-54 214.2 116 82.8
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 6.1e-54 214.2 116 82.8
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 6.1e-54 214.2 115 82.6
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 8.0e-54 213.8 125 76.8
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 8.0e-54 213.8 118 78.0
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 8.0e-54 213.8 117 80.3
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 1.0e-53 213.4 115 82.6
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 1.0e-53 213.4 115 82.6
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 1.0e-53 213.4 120 79.2
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 1.0e-53 213.4 117 83.8
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 1.0e-53 213.4 116 83.6
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.0e-53 213.4 119 81.5
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 1.0e-53 213.4 119 81.5
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 1.4e-53 213.0 113 82.3
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 1.4e-53 213.0 116 82.8
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 1.8e-53 212.6 115 82.6
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 3.0e-53 211.8 115 80.9
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 3.0e-53 211.8 115 81.7
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 3.0e-53 211.8 116 80.2
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 4.0e-53 211.5 119 80.7
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 4.0e-53 211.5 115 80.0
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 5.2e-53 211.1 115 80.9
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 5.2e-53 211.1 115 80.9
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 5.2e-53 211.1 115 80.9
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 5.2e-53 211.1 115 80.9
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 5.2e-53 211.1 115 80.9
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 5.2e-53 211.1 115 80.9
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 5.2e-53 211.1 121 81.8
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 5.2e-53 211.1 119 79.8
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 6.8e-53 210.7 119 80.7
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 8.9e-53 210.3 116 79.3
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 8.9e-53 210.3 115 81.7
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 8.9e-53 210.3 115 81.7
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 1.5e-52 209.5 115 80.0
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 2.0e-52 209.1 116 78.4
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 2.0e-52 209.1 115 77.4
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 2.0e-52 209.1 120 77.5
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 2.6e-52 208.8 114 79.8
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 3.4e-52 208.4 124 75.8
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 3.4e-52 208.4 116 79.3
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 9.8e-52 206.8 119 79.8
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 1.3e-51 206.5 117 82.1
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.7e-51 206.1 115 75.7
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 2.2e-51 205.7 120 78.3
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 2.8e-51 205.3 117 78.6
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 2.8e-51 205.3 118 81.4
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 2.8e-51 205.3 118 78.0
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 3.7e-51 204.9 115 76.5
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 6.3e-51 204.1 121 77.7
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 1.1e-50 203.4 118 80.5
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.1e-50 203.4 120 77.5
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 1.4e-50 203.0 117 79.5
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 5.4e-50 201.1 118 78.0
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 5.4e-50 201.1 116 74.1
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 7.0e-50 200.7 115 79.1
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 7.0e-50 200.7 116 77.6
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 9.2e-50 200.3 118 78.0
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 1.2e-49 199.9 118 75.4
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 1.6e-49 199.5 118 78.0
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 1.6e-49 199.5 123 77.2
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 2.7e-49 198.7 120 75.0
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 4.5e-49 198.0 116 76.7
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 4.5e-49 198.0 122 77.0
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 5.9e-49 197.6 122 74.6
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 5.9e-49 197.6 120 75.0
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 7.8e-49 197.2 112 81.2
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 7.8e-49 197.2 112 81.2
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 1.7e-48 196.1 118 77.1
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.3e-48 195.7 112 80.4
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 5.0e-48 194.5 112 79.5
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 6.6e-48 194.1 112 80.4
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 6.6e-48 194.1 116 74.1
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 8.6e-48 193.7 116 75.0
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.1e-47 193.4 121 73.6
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 1.5e-47 193.0 119 75.6
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 1.9e-47 192.6 116 75.0
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 9.5e-47 190.3 113 76.1
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 9.5e-47 190.3 131 68.7
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 8.9e-45 183.7 109 76.1
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.2e-44 183.3 117 71.8
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 1.2e-44 183.3 114 73.7
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 8.3e-43 177.2 93 79.6
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 8.3e-43 177.2 119 69.7
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 6.6e-40 167.5 84 86.9
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 8.6e-40 167.2 96 76.0
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 2.5e-39 165.6 86 84.9
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 7.3e-39 164.1 93 75.3
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 7.3e-39 164.1 90 80.0
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 7.3e-39 164.1 90 81.1
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 9.5e-39 163.7 93 74.2
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 2.0e-36 156.0 91 72.5
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 4.4e-36 154.8 90 81.1
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 1.7e-35 152.9 115 64.3
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 7.8e-33 144.1 87 77.0
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 6.6e-32 141.0 89 73.0
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 1.5e-31 139.8 92 71.7
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.5e-28 129.8 85 74.1
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 1.9e-26 122.9 88 67.0
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 1.9e-26 122.9 103 60.2
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 3.9e-24 115.2 89 67.4
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 1.9e-23 112.8 115 49.6
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 3.6e-22 108.6 61 77.0
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 1.5e-20 103.2 92 52.2
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 1.6e-17 93.2 59 64.4
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 7.8e-17 90.9 91 47.3
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 1.1e-15 87.0 120 42.5
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.2e-12 77.0 57 66.7
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 4.2e-10 68.6 43 72.1
MD17G1209900 Malus domestica HOM05D005659 ORTHO05D007059 6.0e-09 64.7 45 66.7
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 1.0e-08 63.9 49 63.3


User provided reference genes

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