Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22782 Davidia involucrata HOM05D004985 ORTHO05D005912 8.6e-246 853.2 431 100.0
Hma1.2p1_0060F.1_g033100 Hydrangea macrophylla HOM05D004985 ORTHO05D005912 3.5e-138 495.7 284 85.6
Actinidia04825 Actinidia chinensis HOM05D004985 ORTHO05D004228 8.6e-137 491.1 308 80.5
CSS0016421 Camellia sinensis var. sinensis HOM05D004985 ORTHO05D005912 1.9e-136 490.0 284 84.9
CSS0040501 Camellia sinensis var. sinensis HOM05D004985 ORTHO05D005912 1.9e-136 490.0 284 84.9
vmacro17610 Vaccinium macrocarpon HOM05D004985 ORTHO05D005912 1.9e-131 473.4 285 81.4
Cpa.g.sc94.56 Carica papaya HOM05D004985 ORTHO05D005912 7.8e-130 468.0 286 81.8
GSVIVG01007867001 Vitis vinifera HOM05D004985 ORTHO05D005912 7.3e-128 461.5 285 81.4
Atru.chr9.579 Acer truncatum HOM05D004985 ORTHO05D005912 8.1e-127 458.0 284 80.6
TAR374G0278 Trochodendron aralioides HOM05D004985 ORTHO05D005912 2.4e-126 456.4 284 79.9
QL10p019503 Quercus lobata HOM05D004985 ORTHO05D005912 3.1e-126 456.1 284 78.9
Ciclev10021430m.g Citrus clementina HOM05D004985 ORTHO05D005912 6.8e-126 454.9 284 79.2
CSS0005049 Camellia sinensis var. sinensis HOM05D003672 ORTHO05D005912 1.5e-125 453.8 302 76.8
CiPaw.11G053300 Carya illinoinensis HOM05D004985 ORTHO05D005912 7.6e-125 451.4 284 78.9
Manes.14G085700 Manihot esculenta HOM05D004985 ORTHO05D005912 9.9e-125 451.1 284 79.6
Eucgr.K02531 Eucalyptus grandis HOM05D004985 ORTHO05D005912 4.9e-124 448.7 284 79.9
Prupe.5G205100 Prunus persica HOM05D004985 ORTHO05D005912 4.9e-124 448.7 287 77.7
TWI31G1299 Tripterygium wilfordii HOM05D004985 ORTHO05D005912 7.1e-123 444.9 284 77.5
COL.COLO4_06857 Corchorus olitorius HOM05D004985 ORTHO05D005912 1.6e-122 443.7 284 77.5
Duzib205G0214 Durio zibethinus HOM05D004985 ORTHO05D005912 2.1e-122 443.4 284 78.5
Oeu014411.1 Olea europaea HOM05D004985 ORTHO05D005912 2.1e-122 443.4 287 77.0
Gohir.A07G068600 Gossypium hirsutum HOM05D004985 ORTHO05D005912 2.7e-122 443.0 285 78.6
PGR044G1445 Punica granatum HOM05D004985 ORTHO05D005912 4.6e-122 442.2 284 75.7
Thecc.03G101800 Theobroma cacao HOM05D004985 ORTHO05D005912 6.0e-122 441.8 284 78.5
Potri.012G066200 Populus trichocarpa HOM05D004985 ORTHO05D005912 7.8e-122 441.4 284 77.1
Oeu042721.3 Olea europaea HOM05D004985 ORTHO05D005912 1.7e-121 440.3 287 77.7
Gohir.D07G073100 Gossypium hirsutum HOM05D004985 ORTHO05D005912 3.0e-121 439.5 285 78.2
MBI19_g00634_MAGBIO Magnolia biondii HOM05D004985 ORTHO05D005912 3.0e-121 439.5 288 77.1
Gorai.001G077300 Gossypium raimondii HOM05D004985 ORTHO05D005912 6.6e-121 438.3 285 77.9
Cc09_g09310 Coffea canephora HOM05D004985 ORTHO05D005912 4.3e-120 435.6 285 76.1
MSTRG.9599 Avicennia marina HOM05D004985 ORTHO05D005912 2.8e-119 433.0 287 74.6
Rhsim08G0146000 Rhododendron simsii HOM05D004985 ORTHO05D005912 6.2e-119 431.8 355 64.5
PGSC0003DMG400030337 Solanum tuberosum HOM05D004985 ORTHO05D005912 6.2e-119 431.8 285 75.4
RcHm_v2.0_Chr7g0183091 Rosa chinensis HOM05D004985 ORTHO05D005912 9.0e-118 427.9 286 75.5
Solyc06g076510.3 Solanum lycopersicum HOM05D004985 ORTHO05D005912 2.0e-117 426.8 285 74.7
MSTRG.15338 Avicennia marina HOM05D004985 ORTHO05D005912 5.8e-117 425.2 291 74.6
Migut.D01657 Erythranthe guttata HOM05D004985 ORTHO05D005912 5.8e-117 425.2 287 75.3
Sopen06g032910 Solanum pennellii HOM05D004985 ORTHO05D005912 7.6e-117 424.9 285 74.0
Sabra12G0048600 Salix brachista HOM05D004985 ORTHO05D005912 2.2e-116 423.3 308 70.1
Haze_18480 Corylus avellana HOM05D004985 ORTHO05D005912 3.8e-116 422.5 279 76.0
FAN13G1687 Fragaria x ananassa HOM05D004985 ORTHO05D005912 3.2e-115 419.5 287 73.9
SalBow4G0956 Salvia bowleyana HOM05D004985 ORTHO05D005912 4.2e-115 419.1 287 74.2
Nitab4.5_0004739g0030 Nicotiana tabacum HOM05D004985 ORTHO05D005912 7.1e-115 418.3 283 74.2
Sed0020095 Sechium edule HOM05D004985 ORTHO05D005912 1.2e-114 417.5 284 72.9
FvH4_5g13840 Fragaria vesca HOM05D004985 ORTHO05D005912 2.1e-114 416.8 287 73.9
CsaV3_1G002920 Cucumis sativus L. HOM05D004985 ORTHO05D005912 7.8e-114 414.8 284 72.5
arahy.Tifrunner.gnm1.ann1.B21894 Arachis hypogaea HOM05D004985 ORTHO05D005912 1.0e-113 414.5 288 73.3
arahy.Tifrunner.gnm1.ann1.XT1KNI Arachis hypogaea HOM05D004985 ORTHO05D005912 1.7e-113 413.7 288 72.9
Glyma.04G162700 Glycine max HOM05D004985 ORTHO05D005912 8.7e-113 411.4 286 73.4
Aqoxy3G03694 Aquilegia oxysepala HOM05D004985 ORTHO05D005912 1.5e-112 410.6 288 72.6
THA.LOC104812106 Tarenaya hassleriana HOM05D004985 ORTHO05D005912 3.3e-112 409.5 284 73.2
Nitab4.5_0000116g0440 Nicotiana tabacum HOM05D004985 ORTHO05D005912 4.3e-112 409.1 284 72.5
ClCG06G015640 Citrullus lanatus HOM05D004985 ORTHO05D005912 5.6e-112 408.7 299 69.6
Peaxi162Scf00481g00631 Petunia axillaris HOM05D004985 ORTHO05D005912 7.3e-112 408.3 286 71.3
CAN.G394.86 Capsicum annuum HOM05D004985 ORTHO05D005912 1.6e-111 407.1 287 71.4
Hund02586 Selenicereus undatus HOM05D004985 ORTHO05D005912 6.2e-111 405.2 296 70.6
SGA_v2.0_scaffold42G16037 Striga asiatica HOM05D004985 ORTHO05D005912 6.2e-111 405.2 287 72.1
ECA232G4926 Erigeron canadensis HOM05D004985 ORTHO05D005912 8.1e-111 404.8 284 71.5
Glyma.06G203300 Glycine max HOM05D004985 ORTHO05D005912 1.8e-110 403.7 286 72.4
Manes.06G084800 Manihot esculenta HOM05D004985 ORTHO05D005912 1.8e-110 403.7 242 82.2
TPR.G12221 Trifolium pratense HOM05D004985 ORTHO05D005912 2.4e-110 403.3 285 72.3
TWI79G1560 Tripterygium wilfordii HOM05D004985 ORTHO05D005912 3.1e-110 402.9 221 88.2
Lsat_1_v5_gn_2_122560 Lactuca sativa HOM05D004985 ORTHO05D005912 4.0e-110 402.5 284 71.1
AL1G31080 Arabidopsis lyrata HOM05D004985 ORTHO05D005912 6.9e-110 401.7 285 71.6
Ca_14341_v3 Cicer arietinum L. HOM05D004985 ORTHO05D005912 9.0e-110 401.4 286 71.3
Thhalv10008334m.g Eutrema salsugineum HOM05D004985 ORTHO05D005912 1.2e-109 401.0 284 71.5
MD14G1211600 Malus domestica HOM05D004985 ORTHO05D005912 1.5e-109 400.6 243 82.7
A06p14760 Brassica napus HOM05D004985 ORTHO05D005912 2.0e-109 400.2 287 70.0
AT1G18640 Arabidopsis thaliana HOM05D004985 ORTHO05D005912 2.6e-109 399.8 284 71.1
PSO017G5703 Papaver somniferum HOM05D004985 ORTHO05D005912 3.4e-109 399.4 288 70.1
MD06G1202500 Malus domestica HOM05D004985 ORTHO05D005912 4.5e-109 399.1 243 82.7
BraA06t24599Z Brassica rapa HOM05D004985 ORTHO05D005912 7.6e-109 398.3 287 69.7
CARHR019270 Cardamine hirsuta HOM05D004985 ORTHO05D005912 9.9e-109 397.9 285 71.9
MELO3C017224.2 Cucumis melo HOM05D004985 ORTHO05D005912 1.3e-108 397.5 319 65.5
AUR62008533 Chenopodium quinoa HOM05D004985 ORTHO05D005912 1.7e-108 397.1 290 70.7
AUR62021560 Chenopodium quinoa HOM05D004985 ORTHO05D005912 1.7e-108 397.1 289 70.9
PSO478G5014 Papaver somniferum HOM05D004985 ORTHO05D005912 1.7e-108 397.1 288 70.1
Sp1g16610 Schrenkiella parvula HOM05D004985 ORTHO05D005912 2.2e-108 396.7 285 70.9
DCAR_029981 Daucus carota HOM05D004985 ORTHO05D005912 3.8e-108 396.0 292 70.9
Lj1g0020192 Lotus japonicus HOM05D004985 ORTHO05D005912 8.4e-108 394.8 285 71.2
BcaC05g25759 Brassica carinata HOM05D004985 ORTHO05D005912 1.4e-107 394.0 287 69.3
C05p16910 Brassica napus HOM05D004985 ORTHO05D005912 1.4e-107 394.0 287 69.3
Carub.0001s1827 Capsella rubella HOM05D004985 ORTHO05D005912 1.9e-107 393.7 284 70.4
Aa31LG7G3400 Aethionema arabicum HOM05D004985 ORTHO05D005912 5.4e-107 392.1 321 64.8
BolC5t30393H Brassica oleracea HOM05D004985 ORTHO05D005912 5.4e-107 392.1 285 69.5
CANSAT35G1156 Cannabis sativa HOM05D004985 ORTHO05D005912 9.3e-107 391.3 288 71.2
Psat5g208200 Pisum sativum HOM05D004985 ORTHO05D005912 1.2e-106 391.0 286 71.0
Nn4g23424 Nelumbo nucifera HOM05D004985 ORTHO05D005912 1.6e-106 390.6 286 71.0
HanXRQChr09g0270221 Helianthus annuus HOM05D004985 ORTHO05D005912 2.1e-106 390.2 243 79.0
Medtr3g025840 Medicago truncatula HOM05D004985 ORTHO05D005912 2.1e-106 390.2 286 69.2
A08p30280 Brassica napus HOM05D004985 ORTHO05D005912 2.7e-106 389.8 286 68.5
Phvul.010G007300 Phaseolus vulgaris HOM05D004985 ORTHO05D005912 4.6e-106 389.0 289 69.9
BcaB07g31884 Brassica carinata HOM05D004985 ORTHO05D005912 6.0e-106 388.7 285 69.1
Carub.0007s3048 Capsella rubella HOM05D004985 ORTHO05D005912 1.0e-105 387.9 284 69.0
TPR.G28540 Trifolium pratense HOM05D004985 ORTHO05D005912 1.8e-105 387.1 287 70.0
FAN08G1159 Fragaria x ananassa HOM05D004985 ORTHO05D005912 3.0e-105 386.3 287 70.7
Sed0001113 Sechium edule HOM05D004985 ORTHO05D005912 3.9e-105 386.0 284 69.7
FAN18G1860 Fragaria x ananassa HOM05D004985 ORTHO05D005912 6.7e-105 385.2 287 69.7
VMungo0331G0044 Vigna mungo HOM05D004985 ORTHO05D005912 6.7e-105 385.2 288 70.1
Nn3g17450 Nelumbo nucifera HOM05D004985 ORTHO05D005912 9.6e-104 381.3 257 76.3
Lalb_Chr12g0197201 Lupinus albus HOM05D004985 ORTHO05D005912 4.0e-102 375.9 290 67.6
TAR622G1020 Trochodendron aralioides HOM05D004985 ORTHO05D005912 5.8e-101 372.1 290 68.6
Lj1g0027941 Lotus japonicus HOM05D004985 ORTHO05D005912 2.2e-100 370.2 287 69.0
Duzib084G0347 Durio zibethinus HOM05D004985 ORTHO05D005912 2.7e-98 363.2 285 66.3
C08p18810 Brassica napus HOM05D004985 ORTHO05D005912 4.6e-98 362.5 336 59.8
Os11g0629500 Oryza sativa ssp. japonica HOM05D004985 ORTHO05D005912 1.8e-97 360.5 286 67.5
BraA08t34961Z Brassica rapa HOM05D004985 ORTHO05D005912 5.1e-97 359.0 239 74.1
Os12g0502400 Oryza sativa ssp. japonica HOM05D004985 ORTHO05D005912 3.3e-96 356.3 286 65.0
unitig_60.g25411 Utricularia gibba HOM05D004985 ORTHO05D005912 5.7e-96 355.5 295 63.1
ATR0681G325 Amborella trichopoda HOM05D004985 ORTHO05D005912 1.3e-95 354.4 213 79.8
EL10Ac8g18666 Beta vulgaris HOM05D004985 ORTHO05D005912 4.5e-93 345.9 209 80.9
BolC8t49507H Brassica oleracea HOM05D004985 ORTHO05D005912 5.0e-92 342.4 264 67.0
BcaC07g38933 Brassica carinata HOM05D004985 ORTHO05D005912 1.1e-91 341.3 261 67.4
Zm00001eb166440 Zea mays HOM05D004985 ORTHO05D005912 1.4e-91 340.9 233 72.5
AUR62008530 Chenopodium quinoa HOM05D004985 ORTHO05D005912 1.9e-91 340.5 289 63.7
Sc10g0009710 Simmondsia chinensis HOM05D004985 ORTHO05D005912 1.2e-85 321.2 228 70.6
Actinidia16126 Actinidia chinensis HOM05D003322 ORTHO05D005912 2.0e-85 320.5 287 60.6
Cc11_g04830 Coffea canephora HOM05D004985 ORTHO05D005912 1.3e-84 317.8 249 67.9
CDE06G0240 Ceratophyllum demersum HOM05D004985 ORTHO05D005912 3.2e-83 313.2 207 75.8
AagrBONN_evm.TU.Sc2ySwM_228.2773 Anthoceros agrestis HOM05D004985 ORTHO05D005912 7.9e-82 308.5 216 69.0
SMO137G0315 Selaginella moellendorffii HOM05D004985 ORTHO05D005912 3.0e-81 306.6 214 67.3
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 5.1e-81 305.8 228 67.1
Pp3c8_16890 Physcomitrium patens HOM05D004985 ORTHO05D005912 7.4e-80 302.0 220 66.4
Nitab4.5_0000744g0020 Nicotiana tabacum HOM05D004985 ORTHO05D005912 4.2e-75 286.2 424 42.2
Mapoly0023s0019 Marchantia polymorpha HOM05D004985 ORTHO05D005912 1.1e-72 278.1 210 64.3
CDE07G0155 Ceratophyllum demersum HOM05D004985 ORTHO05D005912 4.2e-67 259.6 253 52.6
PRCOL_00003809 Prasinoderma coloniale HOM05D004985 ORTHO05D005912 3.7e-63 246.5 221 58.4
MCO16G297 Micromonas commoda HOM05D004985 ORTHO05D005912 1.2e-61 241.5 214 55.1
Lj7A653T48 Lonicera japonica HOM05D004985 ORTHO05D005912 4.2e-59 233.0 130 88.5
Haze_07724 Corylus avellana HOM05D004985 ORTHO05D005912 1.6e-58 231.1 160 71.9
Cre04.g217955 Chlamydomonas reinhardtii HOM05D004985 ORTHO05D005912 5.2e-57 226.1 210 53.8
Cre04.g217959 Chlamydomonas reinhardtii HOM05D004985 ORTHO05D005912 5.2e-57 226.1 210 53.8
SGA_v2.0_scaffold3G01460 Striga asiatica HOM05D004985 ORTHO05D005912 1.7e-55 221.1 130 83.1
HPP92_012184 Vanilla planifolia HOM05D004985 ORTHO05D005912 1.1e-51 208.4 185 57.3
Nitab4.5_0002968g0050 Nicotiana tabacum HOM05D004985 ORTHO05D005912 3.6e-50 203.4 122 80.3
SGA_v2.0_scaffold1066G53824 Striga asiatica HOM05D004985 ORTHO05D005912 1.8e-49 201.1 167 62.9
Cre01.g053000 Chlamydomonas reinhardtii HOM05D004424 ORTHO05D005476 2.3e-49 200.7 261 42.5
Cre01.g053150 Chlamydomonas reinhardtii HOM05D004424 ORTHO05D005476 8.3e-47 192.2 239 43.5
Cre10.g421700 Chlamydomonas reinhardtii HOM05D004424 ORTHO05D005476 4.1e-46 189.9 224 46.0
EL10Ac1g02367 Beta vulgaris HOM05D004985 ORTHO05D005912 4.2e-43 179.9 165 60.6
Gohir.A07G164340 Gossypium hirsutum HOM05D004985 ORTHO05D005912 4.4e-40 169.9 99 86.9
HPP92_012182 Vanilla planifolia HOM05D004985 ORTHO05D005912 1.7e-39 167.9 109 76.1
Gohir.A06G085600 Gossypium hirsutum HOM05D004985 ORTHO05D005912 1.2e-37 161.8 97 85.6
CBR_g37694 Chara braunii HOM05D004985 ORTHO05D005912 5.8e-32 142.9 100 66.0
Peaxi162Scf00086g01110 Petunia axillaris HOM05D004985 ORTHO05D005912 7.5e-32 142.5 155 51.6
SEGI_10948 Sequoiadendron giganteum HOM05D004985 ORTHO05D005912 2.0e-29 134.4 81 79.0
SalBow5G1356 Salvia bowleyana HOM05D004985 ORTHO05D005912 1.7e-28 131.3 101 70.3
Cfa004103 Carpinus fangiana HOM05D004985 ORTHO05D005912 1.9e-27 127.9 154 50.6
Oeu014405.1 Olea europaea HOM05D004985 ORTHO05D005912 1.2e-26 125.2 92 70.7
Haze_15308 Corylus avellana HOM05D004985 ORTHO05D005912 3.4e-24 117.1 67 82.1
SHI27080 Sapria himalayana HOM05D004985 ORTHO05D005912 7.1e-22 109.4 120 49.2
HanXRQChr02g0035921 Helianthus annuus HOM05D004985 ORTHO05D005912 1.9e-11 74.7 80 50.0
Cfa024059 Carpinus fangiana HOM05D004985 ORTHO05D005912 1.9e-06 58.2 176 31.2


User provided reference genes

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