Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 4.8e-163 577.8 295 100.0
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 9.8e-124 447.2 295 76.9
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 8.3e-123 444.1 295 76.3
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 8.3e-123 444.1 295 76.3
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 2.7e-121 439.1 294 75.5
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 2.0e-116 422.9 294 72.1
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 3.4e-116 422.2 294 72.4
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 5.4e-114 414.8 295 73.2
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 1.2e-113 413.7 352 62.5
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 1.3e-112 410.2 296 70.9
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 2.9e-112 409.1 295 70.8
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 5.6e-111 404.8 293 70.3
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 5.6e-111 404.8 285 73.3
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 7.3e-111 404.4 294 68.7
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 1.6e-110 403.3 294 68.7
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 2.1e-110 402.9 294 70.7
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 3.6e-110 402.1 294 68.4
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 4.0e-109 398.7 294 68.0
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.2e-108 397.1 294 67.3
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 2.6e-108 396.0 295 67.8
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 6.4e-107 391.3 295 67.1
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 8.3e-107 391.0 295 68.5
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 4.1e-106 388.7 318 62.9
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 1.6e-105 386.7 307 65.8
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 2.0e-105 386.3 294 68.0
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 3.9e-104 382.1 295 66.1
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 8.6e-104 380.9 294 65.0
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 8.6e-104 380.9 294 66.0
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 3.3e-103 379.0 297 65.3
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 5.6e-103 378.3 294 63.9
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 7.3e-103 377.9 294 63.9
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 7.3e-103 377.9 294 63.9
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 1.4e-101 373.6 294 65.0
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 3.1e-101 372.5 295 64.4
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 4.0e-101 372.1 296 62.2
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 5.2e-101 371.7 296 63.5
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 6.8e-101 371.3 296 63.5
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 6.8e-101 371.3 295 64.7
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 8.9e-101 370.9 294 62.9
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 2.0e-100 369.8 295 64.1
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 2.6e-100 369.4 296 65.2
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 2.6e-100 369.4 295 64.7
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 3.4e-100 369.0 293 64.8
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 3.4e-100 369.0 294 63.3
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 3.4e-100 369.0 295 65.1
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 5.8e-100 368.2 293 65.5
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 1.3e-99 367.1 295 63.7
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 6.4e-99 364.8 294 62.6
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 8.3e-99 364.4 294 63.9
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 1.4e-98 363.6 293 63.5
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 2.4e-98 362.8 297 63.6
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 3.2e-98 362.5 294 63.3
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 4.1e-98 362.1 295 62.7
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 7.0e-98 361.3 295 63.7
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 9.2e-98 360.9 294 60.5
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 1.2e-97 360.5 293 64.2
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 2.1e-97 359.8 293 63.1
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 2.7e-97 359.4 294 62.9
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.3e-96 357.1 295 63.4
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 2.3e-96 356.3 294 62.6
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 3.0e-96 355.9 294 62.2
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 2.5e-95 352.8 294 61.9
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 3.3e-95 352.4 293 63.1
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 3.3e-95 352.4 300 60.0
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 3.3e-95 352.4 293 62.5
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 3.3e-95 352.4 294 61.9
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 7.3e-95 351.3 294 61.6
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 7.3e-95 351.3 294 61.9
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 9.5e-95 350.9 278 64.7
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 1.6e-94 350.1 294 61.2
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 1.2e-92 344.0 293 61.1
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 2.0e-92 343.2 293 60.8
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 2.6e-92 342.8 293 60.4
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 4.4e-92 342.0 293 61.8
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 4.4e-92 342.0 293 61.8
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 5.8e-92 341.7 293 60.4
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 5.8e-92 341.7 293 60.4
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 5.8e-92 341.7 295 59.3
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 1.7e-91 340.1 293 61.1
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 2.2e-91 339.7 293 60.4
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 2.4e-90 336.3 289 59.2
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 5.4e-90 335.1 294 58.8
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.6e-89 333.6 294 60.5
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 1.0e-88 330.9 295 56.3
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 1.7e-88 330.1 293 59.7
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 2.3e-88 329.7 294 57.8
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 2.5e-87 326.2 290 59.0
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 2.8e-86 322.8 294 56.8
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 2.8e-86 322.8 297 59.3
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 6.4e-83 311.6 293 53.2
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 1.3e-80 303.9 262 59.2
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 6.6e-80 301.6 305 51.5
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.1e-79 300.8 207 74.4
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.1e-79 300.8 305 51.5
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 4.7e-78 295.4 271 60.1
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 9.9e-76 287.7 293 53.9
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 1.2e-73 280.8 240 60.0
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 9.0e-69 264.6 190 71.1
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 1.5e-68 263.8 298 50.3
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 1.0e-64 251.1 293 51.2
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 4.3e-63 245.7 226 59.3
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 6.9e-61 238.4 189 64.0
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 2.5e-58 229.9 171 71.3
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 7.1e-50 201.8 246 45.1
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 1.9e-42 177.2 105 78.1
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 2.5e-42 176.8 193 52.3
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 5.9e-36 155.6 218 42.2
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 5.5e-34 149.1 102 75.5
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 1.6e-33 147.5 301 33.6
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 4.7e-33 146.0 120 64.2
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 2.2e-30 137.1 131 55.7
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 1.4e-29 134.4 131 55.0
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 3.1e-29 133.3 131 55.0
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 1.2e-28 131.3 110 60.9
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 7.7e-28 128.6 120 56.7
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 4.2e-26 122.9 120 55.0
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 3.9e-24 116.3 111 51.4
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 1.3e-22 111.3 134 47.8
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 4.1e-21 106.3 287 28.9
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 3.5e-20 103.2 238 36.1
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 3.5e-20 103.2 61 82.0
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 5.9e-20 102.4 60 83.3
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 6.1e-17 92.4 122 44.3
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 2.9e-11 73.6 117 33.3
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 6.5e-11 72.4 60 55.0
Peaxi162Scf00255g00049 Petunia axillaris HOM05D006244 ORTHO05D007401 2.5e-10 70.5 82 50.0


User provided reference genes

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