Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 8.0e-135 483.8 250 100.0
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.6e-122 443.0 250 88.4
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 2.7e-122 442.2 245 91.4
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 7.3e-120 434.1 250 86.0
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.2e-119 433.3 250 87.6
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 8.0e-119 430.6 248 84.3
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 1.4e-118 429.9 247 85.0
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 1.4e-118 429.9 248 84.7
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 1.4e-118 429.9 249 84.3
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 2.3e-118 429.1 243 87.2
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 5.2e-118 427.9 250 86.0
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 1.2e-117 426.8 245 88.2
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.5e-117 426.4 246 87.8
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 2.6e-117 425.6 248 84.7
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 9.8e-117 423.7 240 86.7
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.2e-116 422.5 245 84.5
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 2.9e-116 422.2 248 83.9
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 3.7e-116 421.8 257 84.8
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 3.7e-116 421.8 248 83.5
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 3.7e-116 421.8 248 83.5
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 1.4e-115 419.9 250 84.8
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 4.1e-115 418.3 250 83.2
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 5.4e-115 417.9 242 85.1
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.2e-114 416.8 250 80.4
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.6e-114 416.4 242 85.1
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 3.5e-114 415.2 250 80.8
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 4.6e-114 414.8 250 82.4
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 5.9e-114 414.5 248 81.5
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 1.0e-113 413.7 248 81.9
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 3.0e-113 412.1 246 85.0
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 3.0e-113 412.1 248 80.6
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 3.0e-113 412.1 249 82.3
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 3.9e-113 411.8 248 80.6
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 1.1e-112 410.2 249 82.3
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 1.1e-112 410.2 250 80.4
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 1.9e-112 409.5 251 80.5
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 1.9e-112 409.5 251 80.5
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 2.5e-112 409.1 246 82.5
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 2.5e-112 409.1 250 80.8
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 2.5e-112 409.1 250 80.0
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 3.3e-112 408.7 250 80.0
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 5.6e-112 407.9 245 82.0
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 1.2e-111 406.8 245 81.6
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 2.8e-111 405.6 246 81.7
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 2.8e-111 405.6 248 79.0
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 4.7e-111 404.8 247 78.5
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 6.2e-111 404.4 249 78.3
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 6.2e-111 404.4 245 80.4
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 8.0e-111 404.1 250 78.8
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 8.0e-111 404.1 249 77.9
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 1.0e-110 403.7 250 78.8
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 1.4e-110 403.3 245 80.8
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 2.3e-110 402.5 249 77.9
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 2.3e-110 402.5 249 77.9
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 2.3e-110 402.5 249 77.9
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 3.1e-110 402.1 247 78.5
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 8.9e-110 400.6 247 78.1
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 8.9e-110 400.6 249 77.1
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 1.2e-109 400.2 244 79.9
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 1.2e-109 400.2 250 78.0
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 5.8e-109 397.9 250 78.8
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 9.8e-109 397.1 248 79.0
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 1.3e-108 396.7 249 77.9
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 6.4e-108 394.4 245 78.8
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 1.9e-107 392.9 248 77.4
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 3.2e-107 392.1 247 77.3
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 4.1e-107 391.7 252 78.2
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.2e-106 390.2 240 78.8
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 2.0e-106 389.4 250 78.4
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 6.0e-106 387.9 245 79.2
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 8.6e-105 384.0 246 78.0
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 1.1e-104 383.6 264 72.7
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 1.9e-104 382.9 245 78.4
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 9.5e-104 380.6 245 78.0
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 3.6e-103 378.6 245 75.5
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 1.8e-102 376.3 246 75.2
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 8.9e-102 374.0 234 79.1
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 7.5e-101 370.9 248 75.4
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 4.6e-98 361.7 203 89.2
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 7.8e-98 360.9 208 87.0
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 3.9e-97 358.6 228 80.7
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 6.6e-97 357.8 208 86.5
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 7.3e-96 354.4 250 70.4
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 9.5e-96 354.0 250 70.4
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 8.1e-95 350.9 213 84.0
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 1.8e-94 349.7 249 67.5
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 2.3e-94 349.4 242 70.7
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 9.9e-93 344.0 184 95.7
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 4.9e-92 341.7 245 67.8
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 2.4e-91 339.3 250 67.2
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.3e-89 333.6 197 79.2
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 2.3e-89 332.8 248 68.5
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 3.9e-89 332.0 249 69.5
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 1.7e-84 316.6 202 80.7
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 1.9e-83 313.2 196 73.0
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 2.3e-81 306.2 245 66.5
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 2.8e-79 299.3 263 64.3
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 1.8e-78 296.6 246 64.6
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 6.0e-74 281.6 242 57.4
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 3.1e-70 269.2 242 54.1
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 1.0e-65 254.2 238 54.2
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 5.6e-64 248.4 158 74.1
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 3.1e-62 242.7 242 48.8
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 4.0e-62 242.3 239 50.2
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 1.3e-60 237.3 202 65.3
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 4.5e-53 212.2 150 69.3
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 2.2e-52 209.9 144 71.5
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 2.9e-52 209.5 152 69.7
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 6.5e-52 208.4 159 62.9
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 1.6e-50 203.8 131 75.6
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 6.7e-49 198.4 119 82.4
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 9.7e-48 194.5 113 84.1
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 1.0e-36 157.9 119 68.9
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 5.5e-35 152.1 102 73.5
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 5.5e-35 152.1 91 82.4
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 1.0e-33 147.9 231 38.5
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 6.7e-33 145.2 95 70.5
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 2.1e-18 97.1 71 66.2
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 2.1e-18 97.1 159 45.3
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 4.4e-08 62.8 38 89.5
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 7.5e-08 62.0 39 66.7


User provided reference genes

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