Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22695 Davidia involucrata HOM05D001997 ORTHO05D004620 0.0e+00 1224.5 642 100.0
Hma1.2p1_0597F.1_g186510 Hydrangea macrophylla HOM05D001997 ORTHO05D004620 4.0e-279 964.5 626 81.3
Rhsim09G0030400 Rhododendron simsii HOM05D001997 ORTHO05D004620 2.3e-263 912.1 627 77.4
CSS0007184 Camellia sinensis var. sinensis HOM05D001997 ORTHO05D004620 3.1e-255 885.2 597 78.6
Actinidia35961 Actinidia chinensis HOM05D001997 ORTHO05D004620 4.1e-252 874.8 626 74.9
Lj6C60T7 Lonicera japonica HOM05D001997 ORTHO05D004620 7.0e-252 874.0 627 74.0
Haze_00722 Corylus avellana HOM05D001997 ORTHO05D004620 6.2e-240 834.3 628 71.8
Cfa015772 Carpinus fangiana HOM05D001997 ORTHO05D004620 5.2e-239 831.2 633 71.2
QL10p047463 Quercus lobata HOM05D001997 ORTHO05D004620 4.6e-235 818.1 633 70.5
Atru.chr3.1570 Acer truncatum HOM05D001997 ORTHO05D004620 5.4e-228 794.7 633 67.6
Atru.chr3.1589 Acer truncatum HOM05D001997 ORTHO05D004620 5.4e-228 794.7 633 67.6
TAR622G0498 Trochodendron aralioides HOM05D001997 ORTHO05D004620 5.4e-228 794.7 635 70.1
Lsat_1_v5_gn_6_55020 Lactuca sativa HOM05D001997 ORTHO05D004620 3.5e-227 792.0 632 66.8
TAR636G0474 Trochodendron aralioides HOM05D001997 ORTHO05D004620 2.3e-226 789.3 635 70.1
Nitab4.5_0010690g0010 Nicotiana tabacum HOM05D001997 ORTHO05D004620 1.9e-225 786.2 628 69.6
Potri.017G035700 Populus trichocarpa HOM05D001997 ORTHO05D004620 1.9e-225 786.2 633 66.2
Cc01_g08750 Coffea canephora HOM05D001997 ORTHO05D004620 4.3e-225 785.0 650 66.9
CANSAT21G1219 Cannabis sativa HOM05D001997 ORTHO05D004620 1.6e-224 783.1 634 67.8
Sabra17G0022600 Salix brachista HOM05D001997 ORTHO05D004620 8.1e-224 780.8 632 65.8
Potri.007G124700 Populus trichocarpa HOM05D001997 ORTHO05D004620 1.4e-223 780.0 636 65.6
CiPaw.02G056300 Carya illinoinensis HOM05D001997 ORTHO05D004620 6.9e-223 777.7 627 67.8
Manes.04G048600 Manihot esculenta HOM05D001997 ORTHO05D004620 1.7e-221 773.1 635 65.8
Ciclev10019328m.g Citrus clementina HOM05D001997 ORTHO05D004620 1.0e-218 763.8 626 66.9
Prupe.2G167200 Prunus persica HOM05D001997 ORTHO05D004620 3.0e-218 762.3 630 66.2
TWI36G0125 Tripterygium wilfordii HOM05D001997 ORTHO05D004620 4.3e-217 758.4 630 65.9
Duzib093G0427 Durio zibethinus HOM05D001997 ORTHO05D004620 7.4e-217 757.7 630 65.9
RcHm_v2.0_Chr1g0354651 Rosa chinensis HOM05D001997 ORTHO05D004620 9.6e-217 757.3 646 63.9
Sopen06g029850 Solanum pennellii HOM05D001997 ORTHO05D004620 1.3e-216 756.9 637 65.5
Peaxi162Scf00375g00082 Petunia axillaris HOM05D001997 ORTHO05D004620 6.2e-216 754.6 632 66.1
Gorai.004G087500 Gossypium raimondii HOM05D001997 ORTHO05D004620 5.3e-215 751.5 628 65.0
PGSC0003DMG400026903 Solanum tuberosum HOM05D001997 ORTHO05D004620 1.2e-214 750.4 637 65.0
MSTRG.12412 Avicennia marina HOM05D001997 ORTHO05D004620 4.5e-214 748.4 641 64.3
Gohir.D08G083300 Gossypium hirsutum HOM05D001997 ORTHO05D004620 1.7e-213 746.5 629 64.7
Sc19g0002180 Simmondsia chinensis HOM05D001997 ORTHO05D004620 2.9e-213 745.7 637 63.1
HanXRQChr02g0057961 Helianthus annuus HOM05D001997 ORTHO05D004620 2.4e-212 742.7 636 63.2
Gohir.A08G074100 Gossypium hirsutum HOM05D001997 ORTHO05D004620 4.2e-212 741.9 628 64.3
Gorai.006G186500 Gossypium raimondii HOM05D001997 ORTHO05D004620 4.6e-211 738.4 631 64.5
FvH4_7g14000 Fragaria vesca HOM05D001997 ORTHO05D004620 1.0e-210 737.3 646 61.6
Oeu015677.2 Olea europaea HOM05D001997 ORTHO05D004620 1.0e-210 737.3 645 63.4
FAN03G0113 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.8e-210 736.5 646 61.5
FAN06G4213 Fragaria x ananassa HOM05D001997 ORTHO05D004620 2.3e-210 736.1 646 61.8
FAN10G2611 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.0e-210 735.7 646 61.5
FAN10G3464 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.0e-210 735.7 646 61.5
FAN01G1889 Fragaria x ananassa HOM05D001997 ORTHO05D004620 6.7e-210 734.6 646 61.1
PGR044G1365 Punica granatum HOM05D001997 ORTHO05D004620 1.5e-209 733.4 633 63.8
MD07G1139400 Malus domestica HOM05D001997 ORTHO05D004620 3.3e-209 732.3 637 63.6
FAN06G3325 Fragaria x ananassa HOM05D001997 ORTHO05D004620 5.6e-209 731.5 646 61.3
ECA233G5997 Erigeron canadensis HOM05D001997 ORTHO05D004620 1.6e-208 729.9 630 61.7
FAN10G4317 Fragaria x ananassa HOM05D001997 ORTHO05D004620 2.1e-208 729.6 646 61.1
MSTRG.17660 Avicennia marina HOM05D001997 ORTHO05D004620 1.1e-207 727.2 641 63.2
Dinv05995 Davidia involucrata HOM05D001997 ORTHO05D004620 2.5e-204 716.1 627 64.3
Thecc.05G002900 Theobroma cacao HOM05D001997 ORTHO05D004620 5.1e-202 708.4 627 62.5
THA.LOC104802304 Tarenaya hassleriana HOM05D001997 ORTHO05D004620 6.7e-202 708.0 631 63.1
AUR62035000 Chenopodium quinoa HOM05D001997 ORTHO05D004620 4.8e-200 701.8 635 61.1
MBI11_g35030_MAGBIO Magnolia biondii HOM05D001997 ORTHO05D004620 9.0e-199 697.6 635 61.4
HanXRQChr07g0186151 Helianthus annuus HOM05D001997 ORTHO05D004620 7.6e-198 694.5 625 60.2
Sp4g25380 Schrenkiella parvula HOM05D001997 ORTHO05D004620 6.7e-194 681.4 632 60.3
Lj3g0010188 Lotus japonicus HOM05D001997 ORTHO05D004620 1.9e-193 679.9 648 58.6
Glyma.11G094600 Glycine max HOM05D001997 ORTHO05D004620 2.5e-193 679.5 635 59.8
AT2G43250 Arabidopsis thaliana HOM05D001997 ORTHO05D004620 4.8e-192 675.2 625 61.1
Thhalv10001801m.g Eutrema salsugineum HOM05D001997 ORTHO05D004620 2.2e-189 666.4 633 58.9
Migut.N02417 Erythranthe guttata HOM05D001997 ORTHO05D004620 3.2e-188 662.5 637 59.5
Phvul.011G023500 Phaseolus vulgaris HOM05D001997 ORTHO05D004620 4.2e-188 662.1 636 58.6
Glyma.03G127700 Glycine max HOM05D001997 ORTHO05D004620 2.1e-187 659.8 640 58.0
VMungo1127G1251 Vigna mungo HOM05D001997 ORTHO05D004620 2.7e-187 659.4 633 58.5
Ah.05g167000 Amaranthus hybridus HOM05D001997 ORTHO05D004620 3.6e-187 659.1 635 58.4
CARHR138340 Cardamine hirsuta HOM05D001997 ORTHO05D004620 6.1e-187 658.3 624 58.8
SGA_v2.0_scaffold16G07570 Striga asiatica HOM05D001997 ORTHO05D004620 7.9e-187 657.9 633 58.6
Nitab4.5_0002368g0100 Nicotiana tabacum HOM05D001997 ORTHO05D004620 1.8e-186 656.8 550 67.3
A04p32530 Brassica napus HOM05D001997 ORTHO05D004620 2.8e-184 649.4 623 58.6
C04p70220 Brassica napus HOM05D001997 ORTHO05D004620 4.8e-184 648.7 623 58.6
BcaC02g07197 Brassica carinata HOM05D001997 ORTHO05D004620 1.8e-183 646.7 615 59.0
BraA04t18717Z Brassica rapa HOM05D001997 ORTHO05D004620 1.8e-183 646.7 624 58.7
BolC4t28526H Brassica oleracea HOM05D001997 ORTHO05D004620 6.9e-183 644.8 615 58.9
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 9.1e-183 644.4 631 58.0
AUR62037461 Chenopodium quinoa HOM05D001997 ORTHO05D004620 1.2e-182 644.0 634 57.1
Psat7g172720 Pisum sativum HOM05D001997 ORTHO05D004620 1.5e-182 643.7 646 54.5
DCAR_010832 Daucus carota HOM05D001997 ORTHO05D004620 2.2e-181 639.8 583 61.6
Aqoxy7G03960 Aquilegia oxysepala HOM05D001997 ORTHO05D004620 3.8e-181 639.0 640 54.8
AL4G41910 Arabidopsis lyrata HOM05D001997 ORTHO05D004620 6.5e-181 638.3 625 58.9
BcaB06g29293 Brassica carinata HOM05D001997 ORTHO05D004620 3.9e-178 629.0 595 60.3
Ca_26058_v3 Cicer arietinum L. HOM05D001997 ORTHO05D004620 3.3e-177 625.9 652 54.1
arahy.Tifrunner.gnm1.ann1.JTZ133 Arachis hypogaea HOM05D001997 ORTHO05D004620 2.2e-176 623.2 634 56.2
Ca_30128_v3 Cicer arietinum L. HOM05D001997 ORTHO05D004620 3.7e-176 622.5 641 54.6
arahy.Tifrunner.gnm1.ann1.7X5TTD Arachis hypogaea HOM05D001997 ORTHO05D004620 9.4e-172 607.8 635 55.0
PSO675G0019 Papaver somniferum HOM05D001997 ORTHO05D004620 1.2e-171 607.4 651 53.0
Sabra17G0022300 Salix brachista HOM05D001997 ORTHO05D004620 2.1e-171 606.7 567 60.1
TPR.G13756 Trifolium pratense HOM05D001997 ORTHO05D004620 4.7e-171 605.5 650 52.5
PSO017G4366 Papaver somniferum HOM05D001997 ORTHO05D004620 9.7e-169 597.8 648 52.6
Lj4g0020139 Lotus japonicus HOM05D001997 ORTHO05D004620 2.2e-168 596.7 628 54.9
unitig_22.g6172 Utricularia gibba HOM05D001997 ORTHO05D004620 8.5e-165 584.7 633 54.7
CDE08G0116 Ceratophyllum demersum HOM05D001997 ORTHO05D004620 3.2e-164 582.8 618 54.2
Medtr4g076620 Medicago truncatula HOM05D001997 ORTHO05D004620 1.2e-163 580.9 647 51.9
Carub.0004s2573 Capsella rubella HOM05D001997 ORTHO05D004620 1.8e-162 577.0 617 55.4
HPP92_007608 Vanilla planifolia HOM05D001997 ORTHO05D004620 1.8e-162 577.0 629 51.7
Medtr4g076640 Medicago truncatula HOM05D001997 ORTHO05D004620 9.8e-161 571.2 629 51.5
Glyma.12G021000 Glycine max HOM05D001997 ORTHO05D004620 5.2e-154 548.9 618 51.9
Solyc06g073490.2 Solanum lycopersicum HOM05D001997 ORTHO05D004620 2.6e-153 546.6 413 70.5
ATR0743G280 Amborella trichopoda HOM05D001997 ORTHO05D004620 1.2e-150 537.7 640 51.7
Zm00001eb425530 Zea mays HOM05D001997 ORTHO05D004620 2.0e-150 537.0 675 48.6
Gohir.D09G164700 Gossypium hirsutum HOM05D001997 ORTHO05D004620 2.7e-150 536.6 450 65.8
Gohir.A09G169000 Gossypium hirsutum HOM05D001997 ORTHO05D004620 1.0e-149 534.6 450 65.8
TPR.G13749 Trifolium pratense HOM05D001997 ORTHO05D004620 1.7e-149 533.9 651 48.5
Haze_01373 Corylus avellana HOM05D001997 ORTHO05D004620 3.7e-144 516.2 604 50.8
Eucgr.A00056 Eucalyptus grandis HOM05D001997 ORTHO05D004620 1.1e-143 514.6 426 67.6
Nn5g27952 Nelumbo nucifera HOM05D001997 ORTHO05D004620 1.1e-143 514.6 503 58.3
Os04g0490700 Oryza sativa ssp. japonica HOM05D001997 ORTHO05D004620 4.1e-143 512.7 669 46.6
Cfa015264 Carpinus fangiana HOM05D001997 ORTHO05D004620 2.7e-142 510.0 604 50.0
Thhalv10001772m.g Eutrema salsugineum HOM05D001997 ORTHO05D004620 5.0e-133 479.2 623 48.8
SEGI_28245 Sequoiadendron giganteum HOM05D001997 ORTHO05D004620 3.1e-130 469.9 667 44.4
Lalb_Chr01g0001101 Lupinus albus HOM05D001997 ORTHO05D004620 4.9e-128 462.6 411 61.8
C08p23950 Brassica napus HOM05D001997 ORTHO05D004620 7.6e-121 438.7 632 45.1
Cpa.g.sc81.168 Carica papaya HOM05D001997 ORTHO05D004620 2.8e-115 420.2 631 44.7
SalBow3G0527 Salvia bowleyana HOM05D001997 ORTHO05D004620 8.4e-112 408.7 346 65.3
MD01G1056400 Malus domestica HOM05D001997 ORTHO05D004620 1.6e-110 404.4 397 56.7
GSVIVG01013581001 Vitis vinifera HOM05D001997 ORTHO05D004620 2.3e-109 400.6 398 57.0
Glyma.19G130251 Glycine max HOM05D001997 ORTHO05D004620 5.1e-109 399.4 334 65.0
BcaC07g39373 Brassica carinata HOM05D001997 ORTHO05D004620 1.5e-108 397.9 612 43.5
BolC8t50019H Brassica oleracea HOM05D001997 ORTHO05D004620 7.3e-108 395.6 630 42.7
BraA05t19355Z Brassica rapa HOM05D001997 ORTHO05D004620 6.9e-106 389.0 605 43.8
C04p04300 Brassica napus HOM05D001997 ORTHO05D004620 9.0e-106 388.7 607 43.7
A05p03690 Brassica napus HOM05D001997 ORTHO05D004620 1.5e-105 387.9 605 43.1
BolC4t22066H Brassica oleracea HOM05D001997 ORTHO05D004620 5.8e-105 386.0 607 43.5
A06p18770 Brassica napus HOM05D001997 ORTHO05D004620 2.1e-102 377.5 631 41.4
RcHm_v2.0_Chr1g0373181 Rosa chinensis HOM05D001997 ORTHO05D004620 2.5e-92 344.0 612 40.4
FvH4_7g26521 Fragaria vesca HOM05D001997 ORTHO05D004620 7.1e-87 325.9 611 38.6
Mapoly0021s0032 Marchantia polymorpha HOM05D001997 ORTHO05D004620 4.3e-84 316.6 649 34.8
FAN03G0465 Fragaria x ananassa HOM05D001997 ORTHO05D004620 2.1e-78 297.7 610 38.4
FAN06G2538 Fragaria x ananassa HOM05D001997 ORTHO05D004620 4.6e-78 296.6 608 37.7
FAN10G3679 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.7e-75 288.1 609 36.5
BcaNung06617 Brassica carinata HOM05D001997 ORTHO05D004620 9.1e-74 282.3 580 38.4
FAN01G2316 Fragaria x ananassa HOM05D001997 ORTHO05D004620 2.9e-64 250.8 564 35.6
BraA06t24958Z Brassica rapa HOM05D001997 ORTHO05D004620 1.0e-56 225.7 520 36.2
Pp3c13_12610 Physcomitrium patens HOM05D001997 ORTHO05D004620 4.2e-55 220.3 686 28.9
GSVIVG01013582001 Vitis vinifera HOM05D001997 ORTHO05D004620 6.1e-54 216.5 172 69.2
TPR.G11744 Trifolium pratense HOM05D001997 ORTHO05D004620 8.0e-54 216.1 312 44.9
Actinidia28986 Actinidia chinensis HOM05D001997 ORTHO05D004620 1.8e-50 204.9 241 52.3
BcaB06g29296 Brassica carinata HOM05D001997 ORTHO05D004620 1.7e-48 198.4 184 62.0
CAN.G138.1 Capsicum annuum HOM05D001997 ORTHO05D004620 4.5e-41 173.7 113 79.6
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 7.7e-41 172.9 114 78.1
Lsat_1_v5_gn_5_125441 Lactuca sativa HOM05D001997 ORTHO05D004620 1.2e-38 165.6 120 73.3
BcaC07g39374 Brassica carinata HOM05D001997 ORTHO05D004620 3.6e-38 164.1 150 60.0
BcaB06g29294 Brassica carinata HOM05D001997 ORTHO05D004620 7.8e-33 146.4 158 55.7
BcaB01g03399 Brassica carinata HOM05D001997 ORTHO05D004620 6.6e-32 143.3 369 33.6
CAN.G1014.21 Capsicum annuum HOM05D001997 ORTHO05D004620 1.5e-31 142.1 93 79.6
SHI06486 Sapria himalayana HOM05D002588 ORTHO05D002979 4.3e-31 140.6 133 60.9
CAN.G765.4 Capsicum annuum HOM05D001997 ORTHO05D004620 1.4e-29 135.6 93 75.3
C04p70240 Brassica napus HOM05D001997 ORTHO05D004620 2.9e-27 127.9 102 63.7
BolC4t28530H Brassica oleracea HOM05D001997 ORTHO05D004620 2.4e-26 124.8 137 56.2
MD01G1056500 Malus domestica HOM05D001997 ORTHO05D004620 7.0e-26 123.2 85 71.8
Dinv44213 Davidia involucrata HOM05D001997 ORTHO05D004620 9.2e-26 122.9 71 81.7
SalBow3G4229 Salvia bowleyana HOM05D001997 ORTHO05D004620 6.0e-25 120.2 134 54.5
SMO356G0473 Selaginella moellendorffii HOM05D001997 ORTHO05D004620 1.7e-24 118.6 465 26.0
AagrBONN_evm.TU.Sc2ySwM_228.3298 Anthoceros agrestis HOM05D001997 ORTHO05D004620 2.3e-24 118.2 173 39.9
SalBow3G4162 Salvia bowleyana HOM05D001997 ORTHO05D004620 1.1e-23 115.9 89 68.5
BcaC02g07196 Brassica carinata HOM05D001997 ORTHO05D004620 5.6e-23 113.6 86 65.1
BcaB06g29295 Brassica carinata HOM05D001997 ORTHO05D004620 4.0e-21 107.5 86 62.8
Actinidia11446 Actinidia chinensis HOM05D001997 ORTHO05D004620 2.9e-19 101.3 178 42.7
BolC4t28528H Brassica oleracea HOM05D001997 ORTHO05D004620 8.3e-19 99.8 105 54.3
Medtr4g076610 Medicago truncatula HOM05D001997 ORTHO05D004620 8.3e-19 99.8 87 57.5
C04p70260 Brassica napus HOM05D001997 ORTHO05D004620 2.4e-18 98.2 215 37.7
SGA_v2.0_scaffold4G02500 Striga asiatica HOM05D001997 ORTHO05D004620 9.2e-18 96.3 70 68.6
A04p32560 Brassica napus HOM05D001997 ORTHO05D004620 1.2e-17 95.9 215 37.2
BraA04t18720Z Brassica rapa HOM05D001997 ORTHO05D004620 1.2e-17 95.9 215 37.2
TPR.G290 Trifolium pratense HOM05D001997 ORTHO05D004620 1.5e-12 79.0 51 70.6
C03p28740 Brassica napus HOM05D001997 ORTHO05D004620 2.6e-12 78.2 56 67.9
FAN10G4060 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.3e-11 75.9 274 26.3
BcaC05g28816 Brassica carinata HOM05D001997 ORTHO05D004620 3.2e-10 71.2 80 50.0
BcaC01g05247 Brassica carinata HOM05D001997 ORTHO05D004620 7.1e-10 70.1 69 56.5
BcaNung06616 Brassica carinata HOM05D001997 ORTHO05D004620 2.3e-08 65.1 89 41.6
Actinidia21257 Actinidia chinensis HOM05D001997 ORTHO05D004620 1.5e-07 62.4 59 62.7
BcaB01g03396 Brassica carinata HOM05D001623 ORTHO05D001473 3.3e-07 61.2 47 59.6
Hund00190 Selenicereus undatus HOM05D001997 ORTHO05D004620 1.2e-06 59.3 124 33.9


User provided reference genes

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