Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22635 Davidia involucrata HOM05D026815 ORTHO05D029225 1.5e-62 242.7 118 100.0
Dinv21981 Davidia involucrata HOM05D000015 ORTHO05D029225 7.3e-30 134.0 73 89.0
Dinv22630 Davidia involucrata HOM05D000015 ORTHO05D029225 1.8e-28 129.4 62 98.4
Dinv22629 Davidia involucrata HOM05D026815 ORTHO05D179432 1.1e-22 110.2 87 65.5
Dinv21982 Davidia involucrata HOM05D026815 ORTHO05D183022 2.4e-20 102.4 54 90.7
Rhsim10G0152100 Rhododendron simsii HOM05D000015 ORTHO05D015150 3.9e-15 85.1 73 61.6
Hma1.2p1_0261F.1_g105000 Hydrangea macrophylla HOM05D000015 ORTHO05D015150 5.6e-14 81.3 73 57.5
Hma1.2p1_0261F.1_g104980 Hydrangea macrophylla HOM05D000015 ORTHO05D015150 7.4e-14 80.9 72 58.3
Dinv39917 Davidia involucrata HOM05D000015 ORTHO05D022492 1.3e-13 80.1 68 64.7
TAR376G1106 Trochodendron aralioides HOM05D000015 ORTHO05D015150 2.1e-13 79.3 110 43.6
Nitab4.5_0001472g0080 Nicotiana tabacum HOM05D000015 ORTHO05D015150 3.7e-13 78.6 73 54.8
Nitab4.5_0010215g0040 Nicotiana tabacum HOM05D000015 ORTHO05D015150 2.4e-12 75.9 73 54.8
Oeu028391.1 Olea europaea HOM05D000015 ORTHO05D015150 9.0e-12 73.9 63 55.6
Peaxi162Scf00764g00016 Petunia axillaris HOM05D000015 ORTHO05D015150 9.0e-12 73.9 73 52.1
TAR381G0446 Trochodendron aralioides HOM05D000015 ORTHO05D015150 2.0e-11 72.8 69 58.0
vmacro12915 Vaccinium macrocarpon HOM05D026815 ORTHO05D029225 1.1e-09 67.0 55 65.5
MBI11_g34862_MAGBIO Magnolia biondii HOM05D000015 ORTHO05D015150 2.4e-09 65.9 73 50.7
Lj2P560T35 Lonicera japonica HOM05D000015 ORTHO05D022492 5.5e-09 64.7 63 57.1
Oeu057871.1 Olea europaea HOM05D000015 ORTHO05D000249 3.5e-08 62.0 63 46.0
MSTRG.22542 Avicennia marina HOM05D000015 ORTHO05D000249 6.0e-08 61.2 118 33.1
Medtr4g125180 Medicago truncatula HOM05D000015 ORTHO05D000249 1.3e-07 60.1 112 38.4
SEGI_13058 Sequoiadendron giganteum HOM05D000015 ORTHO05D000249 1.8e-07 59.7 72 43.1
FvH4_6g35010 Fragaria vesca HOM05D000015 ORTHO05D000249 2.3e-07 59.3 76 39.5
FAN09G1897 Fragaria x ananassa HOM05D000015 ORTHO05D000249 2.3e-07 59.3 76 39.5
FAN14G3665 Fragaria x ananassa HOM05D000015 ORTHO05D000249 2.3e-07 59.3 76 39.5
RcHm_v2.0_Chr2g0146061 Rosa chinensis HOM05D000015 ORTHO05D000249 2.3e-07 59.3 76 38.2
Thecc.06G122300 Theobroma cacao HOM05D000015 ORTHO05D000249 2.3e-07 59.3 80 42.5
FAN05G2287 Fragaria x ananassa HOM05D000015 ORTHO05D000249 3.0e-07 58.9 76 39.5
Psat4g018360 Pisum sativum HOM05D000015 ORTHO05D000249 3.0e-07 58.9 67 46.3
SGA_v2.0_scaffold71G23877 Striga asiatica HOM05D000015 ORTHO05D000249 3.9e-07 58.5 63 42.9
Cpa.g.sc25.132 Carica papaya HOM05D000015 ORTHO05D000249 5.1e-07 58.2 76 38.2
PSO104G0095 Papaver somniferum HOM05D000015 ORTHO05D000249 6.7e-07 57.8 80 42.5
PSO135G0510 Papaver somniferum HOM05D000015 ORTHO05D000249 8.7e-07 57.4 78 38.5
Potri.003G067000 Populus trichocarpa HOM05D000015 ORTHO05D000249 8.7e-07 57.4 76 44.7
vmacro12921 Vaccinium macrocarpon HOM05D000015 ORTHO05D022492 8.7e-07 57.4 38 68.4
FAN02G4524 Fragaria x ananassa HOM05D000015 ORTHO05D000249 1.1e-06 57.0 71 40.8
Duzib235G0659 Durio zibethinus HOM05D000015 ORTHO05D000249 1.5e-06 56.6 112 35.7
Oeu043642.1 Olea europaea HOM05D000015 ORTHO05D000249 1.5e-06 56.6 63 41.3
TPR.G12719 Trifolium pratense HOM05D000015 ORTHO05D000249 1.5e-06 56.6 67 44.8
Haze_16046 Corylus avellana HOM05D000015 ORTHO05D000249 1.9e-06 56.2 101 36.6
PSO421G0736 Papaver somniferum HOM05D000015 ORTHO05D000249 1.9e-06 56.2 64 45.3
RcHm_v2.0_Chr1g0351771 Rosa chinensis HOM05D000015 ORTHO05D000249 1.9e-06 56.2 76 43.4
MSTRG.10942 Avicennia marina HOM05D000015 ORTHO05D000249 2.5e-06 55.8 87 37.9
Ciclev10024936m.g Citrus clementina HOM05D000015 ORTHO05D000249 2.5e-06 55.8 76 42.1
PSO832G2306 Papaver somniferum HOM05D000015 ORTHO05D000249 2.5e-06 55.8 65 46.2
Sabra03G0039400 Salix brachista HOM05D000015 ORTHO05D000249 2.5e-06 55.8 76 43.4
Gohir.A05G139700 Gossypium hirsutum HOM05D000015 ORTHO05D000249 3.3e-06 55.5 59 49.2
Gohir.D10G057300 Gossypium hirsutum HOM05D000015 ORTHO05D000249 3.3e-06 55.5 76 40.8
Gorai.011G061400 Gossypium raimondii HOM05D000015 ORTHO05D000249 3.3e-06 55.5 76 40.8
PSO724G0544 Papaver somniferum HOM05D000015 ORTHO05D000249 3.3e-06 55.5 78 37.2
PSO732G0647 Papaver somniferum HOM05D000015 ORTHO05D000249 4.3e-06 55.1 79 39.2
Eucgr.C00800 Eucalyptus grandis HOM05D000015 ORTHO05D000249 5.6e-06 54.7 57 43.9
FAN03G2803 Fragaria x ananassa HOM05D000015 ORTHO05D000270 5.6e-06 54.7 76 42.1
vmacro15043 Vaccinium macrocarpon HOM05D000015 ORTHO05D000249 5.6e-06 54.7 85 36.5
Aqoxy4G00259 Aquilegia oxysepala HOM05D000015 ORTHO05D000249 7.4e-06 54.3 64 45.3
FAN10G3869 Fragaria x ananassa HOM05D000015 ORTHO05D000270 7.4e-06 54.3 76 42.1
PGSC0003DMG400016090 Solanum tuberosum HOM05D000015 ORTHO05D000803 7.4e-06 54.3 56 48.2
PSO210G5886 Papaver somniferum HOM05D000015 ORTHO05D000249 9.6e-06 53.9 79 38.0
PSO724G1163 Papaver somniferum HOM05D000015 ORTHO05D000249 9.6e-06 53.9 74 43.2
TWI59G0318 Tripterygium wilfordii HOM05D000015 ORTHO05D000249 9.6e-06 53.9 76 43.4


User provided reference genes

Program Settings