Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22491 Davidia involucrata HOM05D002626 ORTHO05D002749 1.2e-101 373.2 194 100.0
Dinv11263 Davidia involucrata HOM05D002626 ORTHO05D002749 1.2e-13 80.9 48 83.3
Cc01_g19870 Coffea canephora HOM05D002626 ORTHO05D002749 9.6e-11 71.2 48 72.9
MD16G1180600 Malus domestica HOM05D002626 ORTHO05D002749 6.9e-09 65.1 91 45.1
TAR365G0050 Trochodendron aralioides HOM05D002626 ORTHO05D002749 2.0e-08 63.5 52 65.4
Oeu047888.1 Olea europaea HOM05D002626 ORTHO05D002749 3.4e-08 62.8 48 62.5
Psat1g185240 Pisum sativum HOM05D002626 ORTHO05D002749 3.4e-08 62.8 52 63.5
Prupe.1G148100 Prunus persica HOM05D002626 ORTHO05D002749 3.4e-08 62.8 88 45.5
Nn4g26139 Nelumbo nucifera HOM05D002626 ORTHO05D002749 5.8e-08 62.0 53 60.4
TPR.G18027 Trifolium pratense HOM05D002626 ORTHO05D002749 9.9e-08 61.2 52 61.5
MD13G1179500 Malus domestica HOM05D002626 ORTHO05D002749 1.3e-07 60.8 88 44.3
PGR004G1768 Punica granatum HOM05D002626 ORTHO05D002749 1.7e-07 60.5 52 61.5
PGR065G0005 Punica granatum HOM05D002626 ORTHO05D002749 1.7e-07 60.5 52 61.5
Oeu006225.1 Olea europaea HOM05D002626 ORTHO05D002749 2.2e-07 60.1 48 62.5
Medtr2g021070 Medicago truncatula HOM05D002626 ORTHO05D002749 2.9e-07 59.7 52 59.6
CANSAT78G2302 Cannabis sativa HOM05D002626 ORTHO05D002749 6.4e-07 58.5 52 59.6
FvH4_4g14080 Fragaria vesca HOM05D002626 ORTHO05D002749 6.4e-07 58.5 59 54.2
FAN07G1094 Fragaria x ananassa HOM05D002626 ORTHO05D002749 6.4e-07 58.5 52 59.6
FAN12G3398 Fragaria x ananassa HOM05D002626 ORTHO05D002749 6.4e-07 58.5 59 54.2
Lalb_Chr18g0055961 Lupinus albus HOM05D002626 ORTHO05D002749 6.4e-07 58.5 52 57.7
TAR362G1114 Trochodendron aralioides HOM05D002626 ORTHO05D002749 6.4e-07 58.5 52 59.6
Ca_00596_v3 Cicer arietinum L. HOM05D002626 ORTHO05D002749 8.4e-07 58.2 52 57.7
CsaV3_3G013870 Cucumis sativus L. HOM05D002626 ORTHO05D002749 8.4e-07 58.2 87 41.4
Eucgr.H03637 Eucalyptus grandis HOM05D002626 ORTHO05D002749 8.4e-07 58.2 52 57.7
Lj2P1180T46 Lonicera japonica HOM05D002626 ORTHO05D002749 8.4e-07 58.2 48 58.3
Aqoxy2G03206 Aquilegia oxysepala HOM05D002626 ORTHO05D002749 1.1e-06 57.8 50 60.0
Ciclev10005126m.g Citrus clementina HOM05D002626 ORTHO05D002749 1.1e-06 57.8 51 60.8
Phvul.006G157500 Phaseolus vulgaris HOM05D002626 ORTHO05D002749 1.1e-06 57.8 52 57.7
arahy.Tifrunner.gnm1.ann1.WS6KBW Arachis hypogaea HOM05D002626 ORTHO05D002749 1.4e-06 57.4 52 57.7
arahy.Tifrunner.gnm1.ann1.YGA72Z Arachis hypogaea HOM05D002626 ORTHO05D002749 1.4e-06 57.4 52 57.7
MELO3C006579.2 Cucumis melo HOM05D002626 ORTHO05D002749 1.4e-06 57.4 52 57.7
FAN17G1882 Fragaria x ananassa HOM05D002626 ORTHO05D002749 1.4e-06 57.4 52 59.6
Glyma.15G101300 Glycine max HOM05D002626 ORTHO05D002749 1.4e-06 57.4 52 57.7
RcHm_v2.0_Chr4g0419271 Rosa chinensis HOM05D002626 ORTHO05D002749 1.9e-06 57.0 52 57.7
SEGI_28940 Sequoiadendron giganteum HOM05D002626 ORTHO05D002749 1.9e-06 57.0 77 45.5
THA.LOC104802739 Tarenaya hassleriana HOM05D002626 ORTHO05D002749 1.9e-06 57.0 52 57.7
CiPaw.02G089900 Carya illinoinensis HOM05D002626 ORTHO05D002749 2.4e-06 56.6 59 52.5
Dinv38357 Davidia involucrata HOM05D002626 ORTHO05D002749 2.4e-06 56.6 48 56.2
VMungo0540G2474 Vigna mungo HOM05D002626 ORTHO05D002749 2.4e-06 56.6 52 55.8
Thhalv10025468m.g Eutrema salsugineum HOM05D002626 ORTHO05D002749 3.2e-06 56.2 49 61.2
Glyma.13G211400 Glycine max HOM05D002626 ORTHO05D002749 3.2e-06 56.2 52 55.8
Nn1g02101 Nelumbo nucifera HOM05D002626 ORTHO05D002749 3.2e-06 56.2 52 59.6
Sp7g10530 Schrenkiella parvula HOM05D002626 ORTHO05D002749 3.2e-06 56.2 49 61.2
A04p08920 Brassica napus HOM05D002626 ORTHO05D002749 7.1e-06 55.1 49 61.2
Cfa015547 Carpinus fangiana HOM05D002626 ORTHO05D002749 7.1e-06 55.1 59 52.5
Haze_01001 Corylus avellana HOM05D002626 ORTHO05D002749 7.1e-06 55.1 52 57.7
Nitab4.5_0000059g0080 Nicotiana tabacum HOM05D002626 ORTHO05D002749 7.1e-06 55.1 48 54.2
Nitab4.5_0000535g0150 Nicotiana tabacum HOM05D002626 ORTHO05D002749 7.1e-06 55.1 48 54.2
BraA04t16588Z Brassica rapa HOM05D002626 ORTHO05D002749 9.3e-06 54.7 49 59.2
CSS0004520 Camellia sinensis var. sinensis HOM05D002626 ORTHO05D002749 9.3e-06 54.7 48 54.2
Oeu063661.1 Olea europaea HOM05D010728 ORTHO05D002749 9.3e-06 54.7 128 36.7


User provided reference genes

Program Settings