Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22439 Davidia involucrata HOM05D001290 ORTHO05D180481 7.0e-66 253.8 131 100.0
Dinv19721 Davidia involucrata HOM05D001290 ORTHO05D001180 2.5e-10 69.3 58 63.8
Thecc.01G296200 Theobroma cacao HOM05D001290 ORTHO05D001180 1.0e-08 63.9 45 73.3
MD11G1304100 Malus domestica HOM05D001290 ORTHO05D001180 2.3e-08 62.8 45 71.1
MD03G1284400 Malus domestica HOM05D001290 ORTHO05D001180 6.7e-08 61.2 45 71.1
Prupe.8G257500 Prunus persica HOM05D001290 ORTHO05D001180 6.7e-08 61.2 45 71.1
Gohir.D12G010600 Gossypium hirsutum HOM05D001290 ORTHO05D001180 8.7e-08 60.8 45 73.3
Gorai.008G010500 Gossypium raimondii HOM05D001290 ORTHO05D001180 8.7e-08 60.8 45 73.3
CiPaw.08G097600 Carya illinoinensis HOM05D001290 ORTHO05D001180 1.1e-07 60.5 45 66.7
COL.COLO4_23386 Corchorus olitorius HOM05D001290 ORTHO05D001180 1.1e-07 60.5 45 71.1
Nitab4.5_0002606g0050 Nicotiana tabacum HOM05D001290 ORTHO05D001180 1.1e-07 60.5 45 73.3
Cc01_g20610 Coffea canephora HOM05D001290 ORTHO05D001180 1.5e-07 60.1 45 68.9
Nitab4.5_0000524g0090 Nicotiana tabacum HOM05D001290 ORTHO05D001180 1.5e-07 60.1 45 73.3
Cc01_g06410 Coffea canephora HOM05D001290 ORTHO05D001180 1.9e-07 59.7 45 66.7
Gohir.A12G010400 Gossypium hirsutum HOM05D001290 ORTHO05D001180 1.9e-07 59.7 45 73.3
Solyc10g080970.2 Solanum lycopersicum HOM05D001290 ORTHO05D001180 1.9e-07 59.7 45 71.1
Sopen10g031480 Solanum pennellii HOM05D001290 ORTHO05D001180 1.9e-07 59.7 45 71.1
PGSC0003DMG401028101 Solanum tuberosum HOM05D001290 ORTHO05D001180 1.9e-07 59.7 45 71.1
PGSC0003DMG402028101 Solanum tuberosum HOM05D001290 ORTHO05D001180 1.9e-07 59.7 45 71.1
Manes.01G216600 Manihot esculenta HOM05D001290 ORTHO05D001180 2.5e-07 59.3 45 68.9
Sabra11G0084200 Salix brachista HOM05D001290 ORTHO05D001180 2.5e-07 59.3 45 68.9
Sabra11G0085400 Salix brachista HOM05D001290 ORTHO05D001180 2.5e-07 59.3 45 68.9
Prupe.1G144700 Prunus persica HOM05D001290 ORTHO05D001180 3.3e-07 58.9 45 68.9
Nitab4.5_0017610g0010 Nicotiana tabacum HOM05D001290 ORTHO05D001180 4.3e-07 58.5 45 71.1
Potri.011G098600 Populus trichocarpa HOM05D001290 ORTHO05D001180 4.3e-07 58.5 45 66.7
RcHm_v2.0_Chr3g0495451 Rosa chinensis HOM05D001290 ORTHO05D001180 4.3e-07 58.5 45 68.9
RcHm_v2.0_Chr6g0293401 Rosa chinensis HOM05D001290 ORTHO05D001180 5.7e-07 58.2 45 68.9
Eucgr.K03460 Eucalyptus grandis HOM05D001290 ORTHO05D001180 7.4e-07 57.8 47 72.3
Manes.05G064400 Manihot esculenta HOM05D001290 ORTHO05D001180 7.4e-07 57.8 45 66.7
Nitab4.5_0006963g0010 Nicotiana tabacum HOM05D001290 ORTHO05D001180 7.4e-07 57.8 45 71.1
Cfa005956 Carpinus fangiana HOM05D001290 ORTHO05D001180 9.7e-07 57.4 45 66.7
ClCG10G010760 Citrullus lanatus HOM05D001290 ORTHO05D001180 9.7e-07 57.4 45 66.7
Haze_04886 Corylus avellana HOM05D001290 ORTHO05D001180 9.7e-07 57.4 45 66.7
TAR636G3000 Trochodendron aralioides HOM05D001290 ORTHO05D001180 9.7e-07 57.4 45 68.9
CAN.G128.89 Capsicum annuum HOM05D001290 ORTHO05D001180 1.3e-06 57.0 45 68.9
PGR119G0223 Punica granatum HOM05D001290 ORTHO05D001180 1.3e-06 57.0 70 52.9
MELO3C017979.2 Cucumis melo HOM05D001290 ORTHO05D001180 2.2e-06 56.2 45 64.4
CsaV3_4G000560 Cucumis sativus L. HOM05D001290 ORTHO05D001180 2.8e-06 55.8 45 64.4
Hma1.2p1_0209F.1_g088660 Hydrangea macrophylla HOM05D001290 ORTHO05D001180 2.8e-06 55.8 46 71.7
Atru.chr4.2080 Acer truncatum HOM05D001290 ORTHO05D001180 4.8e-06 55.1 45 68.9
FAN15G3691 Fragaria x ananassa HOM05D001290 ORTHO05D001180 4.8e-06 55.1 45 66.7
GSVIVG01027968001 Vitis vinifera HOM05D001290 ORTHO05D001180 4.8e-06 55.1 45 64.4
Peaxi162Scf00047g00731 Petunia axillaris HOM05D001290 ORTHO05D001180 8.2e-06 54.3 55 60.0
Peaxi162Scf00673g00448 Petunia axillaris HOM05D001290 ORTHO05D001180 8.2e-06 54.3 55 60.0
QL07p034283 Quercus lobata HOM05D001290 ORTHO05D001180 8.2e-06 54.3 45 64.4
THA.LOC104826751 Tarenaya hassleriana HOM05D001290 ORTHO05D001180 8.2e-06 54.3 45 66.7


User provided reference genes

Program Settings