Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22429 Davidia involucrata HOM05D022575 ORTHO05D020547 3.6e-86 321.6 170 100.0
Dinv32675 Davidia involucrata HOM05D022575 ORTHO05D020547 1.7e-59 233.0 155 85.8
Dinv22059 Davidia involucrata HOM05D022575 ORTHO05D020547 1.8e-58 229.6 155 85.2
Manes.07G065770 Manihot esculenta HOM05D000030 ORTHO05D000009 7.6e-20 101.3 117 48.7
SHI07448 Sapria himalayana HOM05D000030 ORTHO05D000009 9.3e-18 94.4 92 48.9
SHI00319 Sapria himalayana HOM05D000030 ORTHO05D007344 1.6e-17 93.6 92 50.0
SHI29485 Sapria himalayana HOM05D000030 ORTHO05D000009 4.6e-17 92.0 146 38.4
SHI18041 Sapria himalayana HOM05D000030 ORTHO05D000009 3.9e-16 89.0 156 35.9
Hma1.2p1_0074F.1_g039110 Hydrangea macrophylla HOM05D000030 ORTHO05D007344 5.1e-16 88.6 104 47.1
SHI03791 Sapria himalayana HOM05D000030 ORTHO05D007344 1.9e-15 86.7 143 39.2
SHI16798 Sapria himalayana HOM05D000030 ORTHO05D000009 1.9e-15 86.7 89 46.1
SHI16790 Sapria himalayana HOM05D000030 ORTHO05D007344 3.3e-15 85.9 92 46.7
CSS0044901 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.3e-15 85.5 149 38.3
Rhsim05G0167100 Rhododendron simsii HOM05D000030 ORTHO05D007344 7.3e-15 84.7 155 36.1
Rhsim08G0036500 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.3e-15 84.7 155 36.1
SHI23085 Sapria himalayana HOM05D000030 ORTHO05D007344 1.3e-14 84.0 146 39.0
Rhsim05G0021400 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.8e-14 82.8 130 37.7
SHI19978 Sapria himalayana HOM05D000030 ORTHO05D000009 2.8e-14 82.8 129 40.3
Dinv16326 Davidia involucrata HOM05D022692 ORTHO05D020547 4.8e-14 82.0 163 39.3
Cc03_g12020 Coffea canephora HOM05D000030 ORTHO05D000009 6.2e-14 81.6 132 38.6
Hma1.2p1_0019F.1_g013840 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.2e-14 81.6 97 44.3
Manes.12G100611 Manihot esculenta HOM05D022575 ORTHO05D007344 8.1e-14 81.3 66 53.0
TWI73G0883 Tripterygium wilfordii HOM05D000030 ORTHO05D007344 1.4e-13 80.5 103 42.7
SHI46971 Sapria himalayana HOM05D000030 ORTHO05D007344 1.8e-13 80.1 111 42.3
CSS0000746 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 2.4e-13 79.7 158 38.0
COL.COLO4_35746 Corchorus olitorius HOM05D019187 ORTHO05D007344 2.4e-13 79.7 104 37.5
Dinv30132 Davidia involucrata HOM05D022692 ORTHO05D020547 2.4e-13 79.7 163 38.7
Dinv44703 Davidia involucrata HOM05D022692 ORTHO05D020547 2.4e-13 79.7 164 34.8
Dinv24732 Davidia involucrata HOM05D003557 ORTHO05D001267 5.3e-13 78.6 89 44.9
Rhsim01G0169500 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.0e-13 77.8 167 33.5
TWI81G1001 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 9.0e-13 77.8 103 41.7
Rhsim05G0020900 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.6e-12 76.3 104 39.4
CSS0034216 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 3.4e-12 75.9 146 37.7
Duzib168G1506 Durio zibethinus HOM05D000030 ORTHO05D000009 3.4e-12 75.9 171 33.9
CSS0000197 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 4.5e-12 75.5 159 37.1
Dinv20514 Davidia involucrata HOM05D022692 ORTHO05D020547 4.5e-12 75.5 124 37.9
Dinv20529 Davidia involucrata HOM05D003557 ORTHO05D001267 4.5e-12 75.5 98 42.9
SHI15418 Sapria himalayana HOM05D000030 ORTHO05D000009 5.8e-12 75.1 81 43.2
CiPaw.12G065500 Carya illinoinensis HOM05D000030 ORTHO05D000009 7.6e-12 74.7 95 43.2
COL.COLO4_10262 Corchorus olitorius HOM05D000030 ORTHO05D007344 7.6e-12 74.7 160 31.9
CSS0039788 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 9.9e-12 74.3 120 40.0
COL.COLO4_33382 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.7e-11 73.6 134 32.1
SHI29056 Sapria himalayana HOM05D000030 ORTHO05D000009 2.2e-11 73.2 122 36.1
TWI31G1150 Tripterygium wilfordii HOM05D000030 ORTHO05D007344 2.2e-11 73.2 137 33.6
vmacro07188 Vaccinium macrocarpon HOM05D001605 ORTHO05D007904 3.8e-11 72.4 134 34.3
Rhsim09G0090800 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.4e-11 71.6 166 33.1
RhsimUnG0122000 Rhododendron simsii HOM05D000045 ORTHO05D000009 8.4e-11 71.2 160 33.8
Duzib068G1361 Durio zibethinus HOM05D000030 ORTHO05D000009 1.1e-10 70.9 139 33.1
COL.COLO4_32982 Corchorus olitorius HOM05D019187 ORTHO05D007344 3.2e-10 69.3 136 34.6
SHI00709 Sapria himalayana HOM05D000030 ORTHO05D000009 3.2e-10 69.3 137 35.0
COL.COLO4_34106 Corchorus olitorius HOM05D000030 ORTHO05D007344 4.2e-10 68.9 151 35.8
TWI31G0628 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 4.2e-10 68.9 112 34.8
TWI59G0634 Tripterygium wilfordii HOM05D022692 ORTHO05D007344 5.4e-10 68.6 70 45.7
SHI13597 Sapria himalayana HOM05D000030 ORTHO05D007344 7.1e-10 68.2 92 41.3
SHI00423 Sapria himalayana HOM05D000030 ORTHO05D000009 2.1e-09 66.6 113 36.3
SHI17255 Sapria himalayana HOM05D000030 ORTHO05D000009 2.1e-09 66.6 120 34.2
SGA_v2.0_scaffold8G04316 Striga asiatica HOM05D017085 ORTHO05D026193 2.1e-09 66.6 126 31.0
AUR62042243 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.5e-09 65.9 97 37.1
Rhsim01G0135900 Rhododendron simsii HOM05D000030 ORTHO05D000009 6.0e-09 65.1 131 32.1
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 6.0e-09 65.1 68 44.1
COL.COLO4_24257 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.0e-08 64.3 164 28.0
Gorai.008G091400 Gossypium raimondii HOM05D000030 ORTHO05D000009 1.3e-08 63.9 72 40.3
SGA_v2.0_scaffold56G19922 Striga asiatica HOM05D027498 ORTHO05D007344 2.3e-08 63.2 160 30.0
COL.COLO4_03620 Corchorus olitorius HOM05D019187 ORTHO05D007344 3.0e-08 62.8 69 42.0
COL.COLO4_21412 Corchorus olitorius HOM05D019187 ORTHO05D007344 3.0e-08 62.8 96 41.7
Lj5g0022570 Lotus japonicus HOM05D000030 ORTHO05D000009 3.0e-08 62.8 68 47.1
SGA_v2.0_scaffold2G01281 Striga asiatica HOM05D017085 ORTHO05D026193 6.7e-08 61.6 107 31.8
CiPaw.14G061200 Carya illinoinensis HOM05D000030 ORTHO05D000009 8.7e-08 61.2 95 37.9
MBI18_g15001_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 8.7e-08 61.2 92 39.1
COL.COLO4_06728 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.1e-07 60.8 165 27.3
COL.COLO4_20952 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.1e-07 60.8 164 28.7
COL.COLO4_24409 Corchorus olitorius HOM05D002632 ORTHO05D002881 1.1e-07 60.8 164 28.7
Nn1g02346 Nelumbo nucifera HOM05D000030 ORTHO05D000009 1.1e-07 60.8 92 38.0
SGA_v2.0_scaffold4165G54433 Striga asiatica HOM05D017085 ORTHO05D026193 1.1e-07 60.8 98 31.6
Hund19887 Selenicereus undatus HOM05D000030 ORTHO05D000009 1.5e-07 60.5 105 34.3
COL.COLO4_19731 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.9e-07 60.1 81 33.3
COL.COLO4_36328 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.9e-07 60.1 95 31.6
Gorai.003G080400 Gossypium raimondii HOM05D000030 ORTHO05D000009 4.3e-07 58.9 95 34.7
COL.COLO4_37582 Corchorus olitorius HOM05D000030 ORTHO05D007344 5.6e-07 58.5 164 26.8
QL05p043475 Quercus lobata HOM05D000030 ORTHO05D000009 9.6e-07 57.8 94 37.2
ECA238G0867 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.3e-06 57.4 130 31.5
ECA238G4412 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.3e-06 57.4 168 29.8
ECA248G2624 Erigeron canadensis HOM05D000030 ORTHO05D000009 1.3e-06 57.4 168 28.6
MBI07_g04031_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D000009 1.3e-06 57.4 94 35.1
SHI12975 Sapria himalayana HOM05D000030 ORTHO05D007344 1.3e-06 57.4 92 34.8
SHI32783 Sapria himalayana HOM05D000030 ORTHO05D000009 1.6e-06 57.0 139 28.8
COL.COLO4_22873 Corchorus olitorius HOM05D000030 ORTHO05D000009 2.1e-06 56.6 143 28.7
COL.COLO4_20093 Corchorus olitorius HOM05D000030 ORTHO05D000009 2.8e-06 56.2 112 36.6
COL.COLO4_25215 Corchorus olitorius HOM05D000030 ORTHO05D000009 2.8e-06 56.2 164 26.8
SHI01642 Sapria himalayana HOM05D000030 ORTHO05D007344 2.8e-06 56.2 160 28.1
SHI51830 Sapria himalayana HOM05D000030 ORTHO05D007344 2.8e-06 56.2 92 35.9
COL.COLO4_20865 Corchorus olitorius HOM05D019187 ORTHO05D007344 3.7e-06 55.8 135 30.4
Aqoxy5G03204 Aquilegia oxysepala HOM05D000030 ORTHO05D013719 4.8e-06 55.5 104 33.7
MBI14_g39674_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 4.8e-06 55.5 93 39.8
Gohir.D01G106966 Gossypium hirsutum HOM05D000030 ORTHO05D000009 6.2e-06 55.1 53 45.3
Gorai.002G131300 Gossypium raimondii HOM05D000030 ORTHO05D000009 6.2e-06 55.1 53 45.3
Nn4g24733 Nelumbo nucifera HOM05D000030 ORTHO05D000009 6.2e-06 55.1 91 35.2
COL.COLO4_16743 Corchorus olitorius HOM05D000030 ORTHO05D034864 8.1e-06 54.7 112 35.7
Dinv20244 Davidia involucrata HOM05D000030 ORTHO05D000031 8.1e-06 54.7 59 42.4
MBI09_g43506_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D001260 8.1e-06 54.7 151 31.8
MBI13_g29288_MAGBIO Magnolia biondii HOM05D000030 ORTHO05D001260 8.1e-06 54.7 52 42.3
Rhsim10G0072900 Rhododendron simsii HOM05D001288 ORTHO05D001123 8.1e-06 54.7 48 47.9


User provided reference genes

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