Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 2.1e-92 342.4 183 100.0
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 5.3e-19 98.6 127 50.4
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 1.0e-17 94.4 114 51.8
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 4.9e-17 92.0 133 49.6
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 3.5e-15 85.9 171 40.4
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 4.6e-15 85.5 168 36.9
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 7.9e-15 84.7 130 47.7
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 1.3e-14 84.0 114 46.5
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.8e-14 83.6 120 48.3
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 3.0e-14 82.8 111 45.0
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 3.0e-14 82.8 116 46.6
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 5.1e-14 82.0 120 44.2
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 1.1e-13 80.9 117 45.3
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 1.5e-13 80.5 120 43.3
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 1.9e-13 80.1 148 42.6
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 2.5e-13 79.7 118 50.0
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 3.3e-13 79.3 110 47.3
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 1.3e-12 77.4 191 37.2
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 1.6e-12 77.0 108 48.1
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 1.6e-12 77.0 116 42.2
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 2.2e-12 76.6 172 39.0
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 8.2e-12 74.7 115 41.7
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 8.2e-12 74.7 111 47.7
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 2.4e-11 73.2 108 44.4
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 4.1e-11 72.4 108 43.5
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 4.1e-11 72.4 105 41.0
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 4.1e-11 72.4 108 40.7
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 5.3e-11 72.0 107 44.9
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 5.3e-11 72.0 115 43.5
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 6.9e-11 71.6 120 42.5
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 6.9e-11 71.6 65 64.6
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 1.2e-10 70.9 113 41.6
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 1.2e-10 70.9 117 42.7
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 1.2e-10 70.9 158 38.6
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 2.6e-10 69.7 113 44.2
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 4.5e-10 68.9 177 33.3
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 5.9e-10 68.6 117 40.2
Lsat_1_v5_gn_8_93101 Lactuca sativa HOM05D008367 ORTHO05D010529 5.9e-10 68.6 116 36.2
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 7.7e-10 68.2 51 64.7
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 1.3e-09 67.4 112 39.3
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.3e-09 67.4 110 41.8
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 1.7e-09 67.0 114 40.4
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 2.2e-09 66.6 117 41.9
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 2.2e-09 66.6 117 41.9
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 2.2e-09 66.6 112 42.0
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.2e-09 66.6 112 42.0
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 3.8e-09 65.9 112 38.4
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 3.8e-09 65.9 159 34.6
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.4e-08 63.9 145 35.9
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 5.5e-08 62.0 179 33.0
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 1.2e-07 60.8 52 57.7
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 2.1e-07 60.1 43 67.4
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 2.7e-07 59.7 121 38.0
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 1.8e-06 57.0 113 39.8
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 1.8e-06 57.0 113 39.8
ECA236G2746 Erigeron canadensis HOM05D008367 ORTHO05D010529 2.3e-06 56.6 37 67.6
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 3.0e-06 56.2 108 35.2
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 6.7e-06 55.1 113 38.9


User provided reference genes

Program Settings