Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22404 Davidia involucrata HOM05D007363 ORTHO05D009018 2.6e-80 302.0 153 100.0
CSS0036840 Camellia sinensis var. sinensis HOM05D007363 ORTHO05D009018 1.7e-58 229.6 149 81.9
Actinidia25792 Actinidia chinensis HOM05D007363 ORTHO05D009018 5.9e-56 221.1 142 82.4
Lj1C66G14 Lonicera japonica HOM05D007363 ORTHO05D009018 5.9e-56 221.1 148 78.4
MD05G1197000 Malus domestica HOM05D007363 ORTHO05D009018 1.2e-53 213.4 156 71.8
Hma1.2p1_0576F.1_g182050 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 2.1e-53 212.6 129 81.4
Solyc06g083880.2 Solanum lycopersicum HOM05D007363 ORTHO05D009018 4.7e-53 211.5 153 66.7
DCAR_000936 Daucus carota HOM05D007363 ORTHO05D009018 8.0e-53 210.7 148 71.6
Peaxi162Scf00013g01119 Petunia axillaris HOM05D007363 ORTHO05D009018 2.3e-52 209.1 129 78.3
Sopen06g035280 Solanum pennellii HOM05D007363 ORTHO05D009018 3.0e-52 208.8 148 69.6
Nitab4.5_0020962g0010 Nicotiana tabacum HOM05D007363 ORTHO05D009018 5.2e-52 208.0 153 68.6
PGSC0003DMG400020073 Solanum tuberosum HOM05D007363 ORTHO05D009018 6.8e-52 207.6 148 69.6
GSVIVG01028336001 Vitis vinifera HOM05D007363 ORTHO05D009018 6.8e-52 207.6 145 72.4
Prupe.8G223500 Prunus persica HOM05D007363 ORTHO05D009018 2.0e-51 206.1 148 74.3
Rhsim01G0263400 Rhododendron simsii HOM05D007363 ORTHO05D009018 2.6e-51 205.7 141 75.2
HanXRQChr10g0280941 Helianthus annuus HOM05D007363 ORTHO05D009018 4.4e-51 204.9 144 72.9
Oeu026230.1 Olea europaea HOM05D007363 ORTHO05D009018 5.7e-51 204.5 143 71.3
TAR365G0665 Trochodendron aralioides HOM05D007363 ORTHO05D009018 7.5e-51 204.1 155 71.6
PSO017G1673 Papaver somniferum HOM05D007363 ORTHO05D009018 2.4e-49 199.1 158 67.7
ECA247G1846 Erigeron canadensis HOM05D007363 ORTHO05D009018 3.1e-49 198.7 151 66.9
Atru.chr5.1691 Acer truncatum HOM05D007363 ORTHO05D009018 4.1e-49 198.4 151 72.2
Lsat_1_v5_gn_9_8480 Lactuca sativa HOM05D007363 ORTHO05D009018 5.4e-49 198.0 147 68.7
PSO063G1687 Papaver somniferum HOM05D007363 ORTHO05D009018 5.4e-49 198.0 158 67.7
Potri.002G038200 Populus trichocarpa HOM05D007363 ORTHO05D009018 9.1e-49 197.2 153 70.6
TWI18G0555 Tripterygium wilfordii HOM05D007363 ORTHO05D009018 9.1e-49 197.2 158 68.4
Cc01_g18330 Coffea canephora HOM05D007363 ORTHO05D009018 5.9e-48 194.5 122 75.4
FvH4_2g21450 Fragaria vesca HOM05D007363 ORTHO05D009018 1.0e-47 193.7 146 70.5
Manes.12G032500 Manihot esculenta HOM05D007363 ORTHO05D009018 1.0e-47 193.7 142 71.8
Nn3g19660 Nelumbo nucifera HOM05D007363 ORTHO05D009018 1.0e-47 193.7 168 64.9
Potri.005G224600 Populus trichocarpa HOM05D007363 ORTHO05D009018 1.7e-47 193.0 146 70.5
Aqoxy5G00227 Aquilegia oxysepala HOM05D007363 ORTHO05D009018 5.0e-47 191.4 127 74.0
FAN20G0360 Fragaria x ananassa HOM05D007363 ORTHO05D009018 6.5e-47 191.0 148 68.2
FAN24G0389 Fragaria x ananassa HOM05D007363 ORTHO05D009018 8.5e-47 190.7 138 70.3
CiPaw.04G186800 Carya illinoinensis HOM05D007363 ORTHO05D009018 1.5e-46 189.9 153 67.3
Sabra05G0173300 Salix brachista HOM05D007363 ORTHO05D009018 2.5e-46 189.1 146 69.2
Ciclev10024115m.g Citrus clementina HOM05D007363 ORTHO05D009018 3.2e-46 188.7 125 76.8
Lj1g0022592 Lotus japonicus HOM05D007363 ORTHO05D009018 5.5e-46 188.0 150 66.0
Phvul.001G161200 Phaseolus vulgaris HOM05D007363 ORTHO05D009018 7.2e-46 187.6 143 67.8
RcHm_v2.0_Chr6g0288091 Rosa chinensis HOM05D007363 ORTHO05D009018 7.2e-46 187.6 146 68.5
ATR0736G122 Amborella trichopoda HOM05D007363 ORTHO05D009018 1.2e-45 186.8 143 66.4
Cfa002427 Carpinus fangiana HOM05D007363 ORTHO05D009018 1.2e-45 186.8 145 69.7
AUR62011874 Chenopodium quinoa HOM05D005758 ORTHO05D007218 1.6e-45 186.4 134 67.2
AUR62024717 Chenopodium quinoa HOM05D007363 ORTHO05D009018 1.6e-45 186.4 124 72.6
Lalb_Chr01g0019641 Lupinus albus HOM05D007363 ORTHO05D009018 2.1e-45 186.0 139 68.3
VMungo1383G1059 Vigna mungo HOM05D007363 ORTHO05D009018 3.6e-45 185.3 143 67.1
QL09p038775 Quercus lobata HOM05D007363 ORTHO05D009018 4.7e-45 184.9 157 65.6
Glyma.03G163300 Glycine max HOM05D007363 ORTHO05D009018 8.0e-45 184.1 150 65.3
ClCG09G007810 Citrullus lanatus HOM05D007363 ORTHO05D009018 1.4e-44 183.3 146 64.4
Medtr7g096960 Medicago truncatula HOM05D007363 ORTHO05D009018 2.3e-44 182.6 153 61.4
arahy.Tifrunner.gnm1.ann1.F24DAH Arachis hypogaea HOM05D007363 ORTHO05D009018 4.0e-44 181.8 145 64.1
EL10Ac5g10397 Beta vulgaris HOM05D007363 ORTHO05D009018 4.0e-44 181.8 146 63.0
FAN15G0604 Fragaria x ananassa HOM05D007363 ORTHO05D009018 4.0e-44 181.8 137 70.1
Duzib133G1388 Durio zibethinus HOM05D007363 ORTHO05D009018 1.2e-43 180.3 159 61.6
arahy.Tifrunner.gnm1.ann1.1CEJ34 Arachis hypogaea HOM05D007363 ORTHO05D009018 1.5e-43 179.9 145 62.8
CsaV3_7G027320 Cucumis sativus L. HOM05D007363 ORTHO05D009018 2.0e-43 179.5 146 63.7
CANSAT01G1440 Cannabis sativa HOM05D007363 ORTHO05D009018 2.6e-43 179.1 142 65.5
Duzib138G0908 Durio zibethinus HOM05D007363 ORTHO05D009018 2.6e-43 179.1 144 66.0
Ca_08677_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 2.2e-42 176.0 123 69.9
Ca_08711_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 2.2e-42 176.0 123 69.9
SalBow6G5236 Salvia bowleyana HOM05D007363 ORTHO05D009018 2.8e-42 175.6 148 62.2
Thecc.01G258000 Theobroma cacao HOM05D007363 ORTHO05D009018 2.8e-42 175.6 126 69.8
Psat3g056960 Pisum sativum HOM05D007363 ORTHO05D009018 3.7e-42 175.3 153 60.1
Ah.02g111990 Amaranthus hybridus HOM05D007363 ORTHO05D009018 4.9e-42 174.9 142 64.1
MELO3C015729.2 Cucumis melo HOM05D007363 ORTHO05D009018 3.1e-41 172.2 145 62.8
Gorai.001G177500 Gossypium raimondii HOM05D007363 ORTHO05D009018 7.0e-41 171.0 155 61.9
COL.COLO4_05892 Corchorus olitorius HOM05D007363 ORTHO05D009018 9.2e-41 170.6 161 55.9
Gohir.D07G155100 Gossypium hirsutum HOM05D007363 ORTHO05D009018 1.6e-40 169.9 155 61.9
SGA_v2.0_scaffold510G52612 Striga asiatica HOM05D007363 ORTHO05D009018 1.7e-39 166.4 148 55.4
AT2G20515 Arabidopsis thaliana HOM05D007363 ORTHO05D009018 2.3e-39 166.0 144 58.3
Gohir.A07G148800 Gossypium hirsutum HOM05D007363 ORTHO05D009018 2.3e-39 166.0 153 60.8
THA.LOC104814517 Tarenaya hassleriana HOM05D007363 ORTHO05D009018 5.0e-39 164.9 141 58.9
Cpa.g.sc165.9 Carica papaya HOM05D007363 ORTHO05D009018 6.6e-39 164.5 145 60.0
Carub.0003s3497 Capsella rubella HOM05D007363 ORTHO05D009018 8.6e-39 164.1 153 55.6
Sp3g33740 Schrenkiella parvula HOM05D007363 ORTHO05D009018 1.1e-38 163.7 144 59.0
BcaC01g06392 Brassica carinata HOM05D007363 ORTHO05D009018 1.5e-38 163.3 146 58.9
C03p16260 Brassica napus HOM05D007363 ORTHO05D009018 1.5e-38 163.3 146 58.9
unitig_0.g703 Utricularia gibba HOM05D007363 ORTHO05D009018 1.9e-38 162.9 155 56.8
AL3G53530 Arabidopsis lyrata HOM05D007363 ORTHO05D009018 3.3e-38 162.2 144 58.3
BcaB01g04373 Brassica carinata HOM05D007363 ORTHO05D009018 3.3e-38 162.2 147 57.8
BolC3t14048H Brassica oleracea HOM05D007363 ORTHO05D009018 3.3e-38 162.2 146 58.2
Migut.N02204 Erythranthe guttata HOM05D007363 ORTHO05D009018 4.3e-38 161.8 162 55.6
A03p13820 Brassica napus HOM05D007363 ORTHO05D009018 5.6e-38 161.4 146 58.2
CARHR111060 Cardamine hirsuta HOM05D007363 ORTHO05D009018 7.3e-38 161.0 142 57.7
Haze_24634 Corylus avellana HOM05D007363 ORTHO05D009018 9.5e-38 160.6 114 73.7
BraA03t10685Z Brassica rapa HOM05D007363 ORTHO05D009018 1.6e-37 159.8 147 57.1
Zm00001eb077670 Zea mays HOM05D007363 ORTHO05D009018 2.1e-37 159.5 122 63.1
BcaB08g34913 Brassica carinata HOM05D007363 ORTHO05D009018 2.8e-37 159.1 144 58.3
Thhalv10002113m.g Eutrema salsugineum HOM05D007363 ORTHO05D009018 3.6e-37 158.7 143 58.0
Os04g0517000 Oryza sativa ssp. japonica HOM05D007363 ORTHO05D009018 8.0e-37 157.5 123 62.6
Eucgr.K03259 Eucalyptus grandis HOM05D007363 ORTHO05D009018 1.8e-36 156.4 148 60.1
Eucgr.L02952 Eucalyptus grandis HOM05D007363 ORTHO05D009018 1.8e-36 156.4 148 60.1
MBI10_g08049_MAGBIO Magnolia biondii HOM05D007363 ORTHO05D009018 1.8e-36 156.4 109 69.7
Sed0008485 Sechium edule HOM05D007363 ORTHO05D009018 3.0e-36 155.6 130 60.8
Hund02916 Selenicereus undatus HOM05D004102 ORTHO05D005307 5.2e-36 154.8 106 72.6
Hma1.2p1_0576F.1_g182040 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 1.2e-35 153.7 106 74.5
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 5.7e-35 151.4 142 55.6
PGR042G3583 Punica granatum HOM05D007363 ORTHO05D009018 7.5e-35 151.0 152 56.6
Lj2P297T63 Lonicera japonica HOM05D007363 ORTHO05D009018 5.0e-31 138.3 97 74.2
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 2.6e-27 125.9 140 48.6
FAN27G1204 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.9e-25 119.8 84 73.8
Lsat_1_v5_gn_3_73760 Lactuca sativa HOM05D007363 ORTHO05D009018 2.1e-21 106.3 109 53.2
Lj5P53T14 Lonicera japonica HOM05D007363 ORTHO05D009018 8.3e-18 94.4 77 66.2
Lj6P94T4 Lonicera japonica HOM05D007363 ORTHO05D009018 5.1e-15 85.1 57 77.2
Lj6P297T4 Lonicera japonica HOM05D007363 ORTHO05D009018 6.6e-15 84.7 57 78.9
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 2.5e-14 82.8 109 40.4
Mapoly0037s0134 Marchantia polymorpha HOM05D007363 ORTHO05D009018 7.3e-14 81.3 111 42.3
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 9.5e-14 80.9 66 62.1
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 7.6e-11 71.2 105 41.0
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 2.2e-10 69.7 110 32.7
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 2.7e-08 62.8 109 33.9
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 4.6e-08 62.0 106 33.0
Pp3c7_26210 Physcomitrium patens HOM05D021038 ORTHO05D009018 4.3e-06 55.5 109 32.1
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 7.3e-06 54.7 109 34.9
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 9.6e-06 54.3 107 33.6


User provided reference genes

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