Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 1.0e-185 653.3 337 100.0
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 1.2e-122 443.7 264 85.2
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 1.4e-118 430.3 254 85.0
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 7.7e-117 424.5 269 82.2
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 9.5e-115 417.5 245 84.9
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 3.6e-114 415.6 263 79.8
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 4.7e-114 415.2 263 79.1
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 2.3e-113 412.9 270 79.3
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 2.3e-113 412.9 269 77.3
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 6.8e-113 411.4 265 78.9
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 4.4e-112 408.7 250 82.4
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 1.3e-111 407.1 273 75.5
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 2.9e-111 406.0 264 78.4
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 4.9e-111 405.2 240 83.8
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 6.4e-111 404.8 261 77.0
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 6.4e-111 404.8 272 77.6
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 1.1e-110 404.1 271 76.8
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 2.4e-110 402.9 271 76.4
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 3.5e-109 399.1 271 75.6
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 1.0e-108 397.5 272 73.9
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 1.7e-108 396.7 272 76.1
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 1.7e-108 396.7 261 76.6
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 2.9e-108 396.0 266 77.8
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 3.9e-108 395.6 311 67.5
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 5.0e-108 395.2 261 75.9
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 3.3e-107 392.5 264 74.2
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 5.6e-107 391.7 280 73.6
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 5.6e-107 391.7 263 77.2
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 5.6e-107 391.7 263 77.6
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 7.3e-107 391.3 261 75.9
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 1.2e-106 390.6 273 73.6
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 2.8e-106 389.4 266 73.3
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 4.7e-106 388.7 299 69.9
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 4.7e-106 388.7 267 76.4
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 1.0e-105 387.5 299 68.9
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 1.4e-105 387.1 263 73.8
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 2.3e-105 386.3 252 76.6
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 3.1e-105 386.0 250 78.0
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 4.0e-105 385.6 268 70.9
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 1.5e-104 383.6 280 72.1
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 1.5e-104 383.6 263 74.5
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 2.0e-104 383.3 263 74.1
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 2.6e-104 382.9 271 73.1
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 2.6e-104 382.9 260 76.2
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 2.6e-104 382.9 268 72.4
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 3.4e-104 382.5 227 84.1
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 4.4e-104 382.1 269 72.1
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 9.8e-104 380.9 327 63.3
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 4.9e-103 378.6 243 74.5
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 1.4e-102 377.1 243 76.1
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 1.9e-102 376.7 268 71.3
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 1.9e-102 376.7 263 71.9
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 2.4e-102 376.3 267 71.2
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 2.0e-101 373.2 289 69.2
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 2.7e-101 372.9 263 70.7
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 2.7e-101 372.9 263 70.7
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 4.6e-101 372.1 243 75.3
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 1.0e-100 370.9 268 69.4
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 1.0e-100 370.9 273 68.5
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 1.3e-100 370.5 213 85.9
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 8.6e-100 367.9 243 72.8
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 1.9e-99 366.7 247 72.1
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 2.5e-99 366.3 255 71.0
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 1.2e-98 364.0 260 69.6
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 1.6e-98 363.6 269 70.6
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 2.8e-98 362.8 243 71.6
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 5.2e-97 358.6 242 71.1
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 5.2e-97 358.6 268 69.0
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 6.8e-97 358.2 244 71.3
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 1.5e-96 357.1 259 68.3
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 2.0e-96 356.7 212 81.1
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 2.6e-96 356.3 222 77.9
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 7.5e-96 354.8 244 70.1
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 3.7e-95 352.4 237 72.2
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 1.2e-93 347.4 237 70.9
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 2.1e-93 346.7 266 69.5
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 3.9e-92 342.4 212 75.5
Nn1g02801 Nelumbo nucifera HOM05D006747 ORTHO05D008384 5.1e-92 342.0 263 68.4
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 5.1e-92 342.0 263 66.2
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 1.1e-91 340.9 210 80.5
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 2.5e-91 339.7 265 70.2
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 2.1e-90 336.7 189 89.9
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 3.6e-90 335.9 268 64.9
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 3.6e-90 335.9 270 63.7
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 2.1e-85 320.1 213 72.3
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 2.5e-83 313.2 243 65.0
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 1.2e-82 310.8 246 67.1
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 2.2e-79 300.1 268 61.6
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 3.8e-79 299.3 176 82.4
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 1.5e-75 287.3 419 42.2
Nitab4.5_0005593g0070 Nicotiana tabacum HOM05D006747 ORTHO05D008384 1.8e-73 280.4 212 68.9
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 1.5e-72 277.3 259 54.8
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 2.0e-72 276.9 233 57.1
Nitab4.5_0000326g0130 Nicotiana tabacum HOM05D006747 ORTHO05D008384 7.1e-70 268.5 242 62.8
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 7.9e-69 265.0 290 50.3
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 9.0e-65 251.5 205 60.0
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 6.4e-63 245.4 189 69.3
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 2.4e-57 226.9 229 50.7
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 1.6e-53 214.2 177 62.7
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 6.9e-49 198.7 163 65.0
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 2.9e-47 193.4 153 69.9
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 2.2e-39 167.2 90 88.9
SEGI_35883 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 4.2e-30 136.3 89 69.7
Hma1.2p1_0273F.1_g109560 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 5.7e-27 125.9 73 84.9
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 4.1e-25 119.8 73 75.3
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 4.5e-24 116.3 96 56.2
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 5.2e-20 102.8 58 84.5
Cpa.g.sc165.14 Carica papaya HOM05D006747 ORTHO05D008384 8.8e-20 102.1 78 70.5
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.7e-18 97.8 56 80.4
Actinidia34401 Actinidia chinensis HOM05D006747 ORTHO05D008384 5.3e-17 92.8 54 79.6
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 5.9e-16 89.4 70 64.3
Duzib133G0415 Durio zibethinus HOM05D006747 ORTHO05D008384 1.9e-14 84.3 50 80.0
SEGI_37670 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 2.1e-13 80.9 52 75.0
Gohir.A07G213740 Gossypium hirsutum HOM05D006747 ORTHO05D008384 2.0e-11 74.3 153 34.6
Gohir.A07G149550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 4.8e-10 69.7 86 50.0
Cre07.g348951 Chlamydomonas reinhardtii HOM05D006747 ORTHO05D008384 3.5e-08 63.5 108 32.4
Actinidia23032 Actinidia chinensis HOM05D004842 ORTHO05D008384 6.5e-07 59.3 31 87.1


User provided reference genes

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