Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22369 Davidia involucrata HOM05D000461 ORTHO05D009042 1.4e-137 493.0 261 100.0
Dinv08335 Davidia involucrata HOM05D000461 ORTHO05D009042 1.2e-109 400.2 257 79.4
CSS0025788 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 1.0e-100 370.5 261 70.5
QL93p2023_0091 Quercus lobata HOM05D000461 ORTHO05D009042 4.3e-91 338.6 257 72.8
QL08p018706 Quercus lobata HOM05D000461 ORTHO05D009042 5.7e-91 338.2 257 72.8
Rhsim04G0018200 Rhododendron simsii HOM05D000461 ORTHO05D009042 1.4e-89 333.6 267 64.0
Hma1.2p1_1003F.1_g246730 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 2.6e-88 329.3 220 79.1
CiPaw.11G175500 Carya illinoinensis HOM05D000461 ORTHO05D009042 2.2e-87 326.2 256 69.9
Cfa020516 Carpinus fangiana HOM05D000461 ORTHO05D009768 2.5e-86 322.8 237 69.2
Nn1g03924 Nelumbo nucifera HOM05D000461 ORTHO05D009042 1.3e-82 310.5 259 66.4
Duzib213G0849 Durio zibethinus HOM05D000461 ORTHO05D009042 4.8e-82 308.5 263 65.8
Thecc.07G072900 Theobroma cacao HOM05D000461 ORTHO05D009042 4.1e-81 305.4 260 66.2
Nitab4.5_0000297g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 2.0e-80 303.1 265 66.4
Prupe.4G189000 Prunus persica HOM05D000461 ORTHO05D009042 2.6e-80 302.8 261 64.8
Solyc07g063530.3 Solanum lycopersicum HOM05D000461 ORTHO05D009042 1.9e-78 296.6 258 58.9
Cc05_g12620 Coffea canephora HOM05D000461 ORTHO05D009042 3.2e-78 295.8 258 63.6
MSTRG.15210 Avicennia marina HOM05D000461 ORTHO05D009042 6.1e-77 291.6 256 63.3
TAR626G1568 Trochodendron aralioides HOM05D000461 ORTHO05D009042 6.1e-77 291.6 258 61.6
TWI39G0508 Tripterygium wilfordii HOM05D000461 ORTHO05D009042 7.9e-77 291.2 259 63.3
Actinidia18752 Actinidia chinensis HOM05D000461 ORTHO05D009042 8.8e-76 287.7 259 63.3
Manes.03G116000 Manihot esculenta HOM05D000461 ORTHO05D009042 8.8e-76 287.7 258 63.6
RcHm_v2.0_Chr5g0035191 Rosa chinensis HOM05D000461 ORTHO05D009042 9.7e-75 284.3 261 60.9
COL.COLO4_09469 Corchorus olitorius HOM05D000461 ORTHO05D009768 1.7e-74 283.5 211 72.0
Glyma.13G281300 Glycine max HOM05D000461 ORTHO05D009042 6.3e-74 281.6 226 68.1
FAN11G0265 Fragaria x ananassa HOM05D000461 ORTHO05D009042 8.2e-74 281.2 261 64.4
MD11G1238100 Malus domestica HOM05D000461 ORTHO05D009042 1.1e-73 280.8 264 64.0
Ciclev10009303m.g Citrus clementina HOM05D000461 ORTHO05D009042 1.4e-73 280.4 262 61.5
Cpa.g.sc80.106 Carica papaya HOM05D000461 ORTHO05D009042 1.8e-73 280.0 226 66.4
FAN16G2536 Fragaria x ananassa HOM05D000461 ORTHO05D009042 2.4e-73 279.6 261 61.7
FAN21G1502 Fragaria x ananassa HOM05D000461 ORTHO05D009042 3.1e-73 279.3 259 61.0
Gohir.A01G068300 Gossypium hirsutum HOM05D000461 ORTHO05D009042 4.1e-73 278.9 264 61.0
Eucgr.F03352 Eucalyptus grandis HOM05D000461 ORTHO05D009042 5.3e-73 278.5 218 68.8
Nitab4.5_0002565g0040 Nicotiana tabacum HOM05D000461 ORTHO05D009042 1.2e-72 277.3 240 66.2
vmacro09553 Vaccinium macrocarpon HOM05D000461 ORTHO05D009042 1.0e-71 274.2 354 49.2
Ca_29614_v3 Cicer arietinum L. HOM05D000461 ORTHO05D009042 1.3e-71 273.9 258 58.9
Medtr2g080290 Medicago truncatula HOM05D000461 ORTHO05D009042 1.3e-71 273.9 258 58.5
Phvul.005G086500 Phaseolus vulgaris HOM05D000461 ORTHO05D009042 2.2e-71 273.1 261 61.3
Lalb_Chr25g0286691 Lupinus albus HOM05D000461 ORTHO05D009042 5.0e-71 271.9 260 56.5
Glyma.12G220000 Glycine max HOM05D000461 ORTHO05D009042 1.1e-70 270.8 261 61.7
Lalb_Chr01g0017011 Lupinus albus HOM05D000461 ORTHO05D009042 1.9e-70 270.0 227 65.2
CANSAT11G1238 Cannabis sativa HOM05D000461 ORTHO05D009042 4.2e-70 268.9 262 58.8
Atru.chr2.2831 Acer truncatum HOM05D000461 ORTHO05D009042 7.2e-70 268.1 261 60.2
Gorai.002G075700 Gossypium raimondii HOM05D000461 ORTHO05D009042 1.2e-69 267.3 270 58.5
Potri.001G405800 Populus trichocarpa HOM05D000461 ORTHO05D009042 1.2e-69 267.3 236 61.9
Gohir.D01G055600 Gossypium hirsutum HOM05D000461 ORTHO05D009042 2.1e-69 266.5 267 58.1
MD03G1219800 Malus domestica HOM05D000461 ORTHO05D009042 2.1e-69 266.5 263 60.8
Psat5g246400 Pisum sativum HOM05D000461 ORTHO05D009042 2.7e-69 266.2 257 56.8
TPR.G32851 Trifolium pratense HOM05D000461 ORTHO05D009042 5.1e-68 261.9 261 58.6
Lj3g0027305 Lotus japonicus HOM05D000461 ORTHO05D009042 4.8e-66 255.4 234 64.5
Sopen07g031710 Solanum pennellii HOM05D000461 ORTHO05D009042 4.8e-66 255.4 172 71.5
PGR031G2091 Punica granatum HOM05D000461 ORTHO05D009042 8.2e-66 254.6 230 60.9
PSO210G3087 Papaver somniferum HOM05D000461 ORTHO05D009042 1.8e-65 253.4 260 59.2
Sabra16G0267700 Salix brachista HOM05D000461 ORTHO05D009042 7.0e-65 251.5 262 56.5
Sabra16G0269500 Salix brachista HOM05D000461 ORTHO05D009042 7.0e-65 251.5 262 54.6
THA.LOC104799911 Tarenaya hassleriana HOM05D000461 ORTHO05D009042 1.6e-64 250.4 186 70.4
Actinidia35273 Actinidia chinensis HOM05D000461 ORTHO05D009042 7.7e-64 248.1 259 56.0
CSS0035681 Camellia sinensis var. sinensis HOM05D000461 ORTHO05D009042 7.7e-64 248.1 175 74.9
Migut.M00872 Erythranthe guttata HOM05D000461 ORTHO05D009042 7.7e-64 248.1 260 58.1
Actinidia25643 Actinidia chinensis HOM05D000461 ORTHO05D009042 8.5e-63 244.6 198 66.7
Ah.04g164980 Amaranthus hybridus HOM05D000461 ORTHO05D009042 1.9e-62 243.4 228 57.0
ClCG10G006570 Citrullus lanatus HOM05D000461 ORTHO05D009042 1.9e-62 243.4 254 56.7
Aqoxy1G02771 Aquilegia oxysepala HOM05D000461 ORTHO05D009042 3.2e-62 242.7 263 56.3
Sed0008890 Sechium edule HOM05D000461 ORTHO05D009042 1.6e-61 240.4 254 56.7
Sc03g0009630 Simmondsia chinensis HOM05D000461 ORTHO05D009042 2.1e-61 240.0 258 51.6
Thhalv10026109m.g Eutrema salsugineum HOM05D000461 ORTHO05D009042 2.7e-61 239.6 200 63.0
BcaC06g32696 Brassica carinata HOM05D000461 ORTHO05D009042 3.6e-61 239.2 201 61.7
BolC7t46022H Brassica oleracea HOM05D000461 ORTHO05D009042 1.4e-60 237.3 201 61.2
C07p55420 Brassica napus HOM05D000461 ORTHO05D009042 5.2e-60 235.3 201 60.7
arahy.Tifrunner.gnm1.ann1.20QRXD Arachis hypogaea HOM05D000461 ORTHO05D009042 1.1e-59 234.2 192 66.7
A03p57230 Brassica napus HOM05D000461 ORTHO05D009042 1.5e-59 233.8 201 61.2
BraA03t14789Z Brassica rapa HOM05D000461 ORTHO05D009042 1.5e-59 233.8 201 61.2
CARHR235060 Cardamine hirsuta HOM05D000461 ORTHO05D009042 2.6e-59 233.0 186 61.8
SGA_v2.0_scaffold73G24312 Striga asiatica HOM05D000461 ORTHO05D009042 1.3e-58 230.7 261 54.0
GSVIVG01014422001 Vitis vinifera HOM05D000461 ORTHO05D009042 1.3e-58 230.7 143 77.6
CsaV3_3G006020 Cucumis sativus L. HOM05D000461 ORTHO05D009042 2.2e-58 229.9 178 69.7
Sp7g25320 Schrenkiella parvula HOM05D000461 ORTHO05D009042 2.2e-58 229.9 200 61.0
arahy.Tifrunner.gnm1.ann1.IDBP1F Arachis hypogaea HOM05D000461 ORTHO05D009042 2.8e-58 229.6 193 66.3
AT4G27390 Arabidopsis thaliana HOM05D000461 ORTHO05D009042 3.7e-58 229.2 186 62.9
Carub.0007s1348 Capsella rubella HOM05D000461 ORTHO05D009042 1.8e-57 226.9 200 59.0
Peaxi162Scf01216g00058 Petunia axillaris HOM05D000461 ORTHO05D009042 1.8e-57 226.9 238 57.1
Lsat_1_v5_gn_7_106400 Lactuca sativa HOM05D000461 ORTHO05D009042 3.1e-57 226.1 224 55.8
Aa31LG5G10130 Aethionema arabicum HOM05D000461 ORTHO05D009042 5.3e-57 225.3 200 67.0
CDE05G1014 Ceratophyllum demersum HOM05D000461 ORTHO05D009042 1.0e-55 221.1 265 50.6
DCAR_013076 Daucus carota HOM05D000461 ORTHO05D009768 8.5e-55 218.0 176 60.2
PSO832G2223 Papaver somniferum HOM05D000461 ORTHO05D009042 4.2e-54 215.7 215 60.5
AL7G25410 Arabidopsis lyrata HOM05D000461 ORTHO05D009042 5.5e-54 215.3 202 57.9
FvH4_3g20860 Fragaria vesca HOM05D000461 ORTHO05D009042 9.4e-54 214.5 208 63.5
Oeu005436.1 Olea europaea HOM05D000461 ORTHO05D009042 2.3e-52 209.9 125 77.6
HanXRQChr11g0330871 Helianthus annuus HOM05D000461 ORTHO05D009042 4.4e-51 205.7 261 48.7
EL10Ac4g08079 Beta vulgaris HOM05D000461 ORTHO05D009042 1.7e-50 203.8 322 40.7
ECA236G1699 Erigeron canadensis HOM05D003383 ORTHO05D003890 1.7e-50 203.8 145 63.4
Haze_09518 Corylus avellana HOM05D000461 ORTHO05D009042 1.0e-47 194.5 287 44.9
AUR62029322 Chenopodium quinoa HOM05D000461 ORTHO05D009042 6.1e-45 185.3 234 48.3
RcHm_v2.0_Chr5g0035211 Rosa chinensis HOM05D000461 ORTHO05D009042 2.4e-41 173.3 109 75.2
Os05g0502500 Oryza sativa ssp. japonica HOM05D000461 ORTHO05D009042 2.7e-40 169.9 208 51.9
HPP92_001809 Vanilla planifolia HOM05D000461 ORTHO05D009042 2.7e-40 169.9 133 61.7
AUR62015609 Chenopodium quinoa HOM05D000461 ORTHO05D009042 4.5e-40 169.1 233 45.9
Zm00001eb352790 Zea mays HOM05D000461 ORTHO05D009042 7.3e-38 161.8 148 54.1
Hund28424 Selenicereus undatus HOM05D000461 ORTHO05D009042 1.6e-37 160.6 213 46.5
Hund28429 Selenicereus undatus HOM05D000461 ORTHO05D009042 1.6e-37 160.6 213 46.5
PGSC0003DMG400019287 Solanum tuberosum HOM05D000461 ORTHO05D009042 1.0e-36 157.9 89 77.5
VMungo1080G0679 Vigna mungo HOM05D000461 ORTHO05D009042 3.4e-35 152.9 176 50.6
MELO3C016549.2 Cucumis melo HOM05D000461 ORTHO05D009042 1.3e-34 151.0 181 48.1
Mapoly0059s0039 Marchantia polymorpha HOM05D000461 ORTHO05D009042 9.2e-33 144.8 300 33.3
Hma1.2p1_1003F.1_g246740 Hydrangea macrophylla HOM05D000461 ORTHO05D009042 2.7e-32 143.3 82 78.0
SMO347G0332 Selaginella moellendorffii HOM05D000461 ORTHO05D009042 1.8e-28 130.6 142 43.7
Pp3c5_7600 Physcomitrium patens HOM05D000461 ORTHO05D009042 9.8e-27 124.8 221 35.7
CBR_g3118 Chara braunii HOM05D000461 ORTHO05D009042 3.7e-26 122.9 146 44.5
Manes.15G162800 Manihot esculenta HOM05D000461 ORTHO05D009042 7.8e-24 115.2 88 65.9
ATR0693G207 Amborella trichopoda HOM05D000461 ORTHO05D009042 7.3e-22 108.6 91 62.6
unitig_85.g27405 Utricularia gibba HOM05D000461 ORTHO05D009042 4.6e-16 89.4 186 40.9
FAN25G1192 Fragaria x ananassa HOM05D000461 ORTHO05D009042 9.9e-11 71.6 54 66.7
MBI18_g11113_MAGBIO Magnolia biondii HOM05D000461 ORTHO05D009042 7.8e-08 62.0 56 55.4
MELO3C030131.2 Cucumis melo HOM05D004229 ORTHO05D025211 2.3e-07 60.5 73 47.9


User provided reference genes

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